Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13845
Experiment: K. M5a1 KLEB10 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K. M5a1 KLEB10 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,887,425 | - | -0.2 | |||
2,887,853 | + | BWI76_RS13840 | 0.57 | -0.3 | |
2,887,917 | - | BWI76_RS13840 | 0.64 | -0.4 | |
2,888,086 | - | BWI76_RS13840 | 0.84 | +2.7 | |
2,888,096 | - | BWI76_RS13840 | 0.85 | -0.4 | |
2,888,096 | - | BWI76_RS13840 | 0.85 | -2.6 | |
2,888,177 | + | +0.1 | |||
2,888,177 | + | -0.5 | |||
2,888,340 | - | +0.8 | |||
2,888,441 | + | BWI76_RS13845 | 0.12 | -1.2 | |
2,888,468 | + | BWI76_RS13845 | 0.15 | -0.0 | |
2,888,608 | - | BWI76_RS13845 | 0.30 | -0.2 | |
2,888,681 | + | BWI76_RS13845 | 0.38 | -2.1 | |
2,888,820 | + | BWI76_RS13845 | 0.54 | +0.1 | |
2,888,820 | + | BWI76_RS13845 | 0.54 | -1.6 | |
2,889,458 | + | BWI76_RS13850 | 0.46 | -0.2 | |
2,889,509 | - | BWI76_RS13850 | 0.57 | +2.0 | |
2,889,546 | + | BWI76_RS13850 | 0.64 | -0.4 | |
2,889,654 | - | BWI76_RS13850 | 0.87 | +0.3 | |
2,889,718 | - | -1.4 | |||
2,889,763 | - | -2.3 | |||
2,889,919 | + | BWI76_RS13855 | 0.28 | -1.5 | |
2,889,989 | + | BWI76_RS13855 | 0.45 | +0.4 | |
2,890,008 | + | BWI76_RS13855 | 0.49 | -0.6 | |
2,890,215 | + | -0.5 |
Or see this region's nucleotide sequence