Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13450 and BWI76_RS13455 are separated by 3 nucleotides BWI76_RS13455 and BWI76_RS13460 are separated by 269 nucleotides
BWI76_RS13450: BWI76_RS13450 - acyl-CoA thioesterase, at 2,804,221 to 2,805,477
_RS13450
BWI76_RS13455: BWI76_RS13455 - salicylaldehyde dehydrogenase, at 2,805,481 to 2,806,914
_RS13455
BWI76_RS13460: BWI76_RS13460 - ABC transporter substrate-binding protein, at 2,807,184 to 2,808,782
_RS13460
Position (kb)
2805
2806
2807 Strain fitness (log2 ratio)
-1
0
1
2 at 2804.578 kb on + strand, within BWI76_RS13450 at 2804.645 kb on + strand, within BWI76_RS13450 at 2804.797 kb on + strand, within BWI76_RS13450 at 2804.846 kb on - strand, within BWI76_RS13450 at 2804.846 kb on - strand, within BWI76_RS13450 at 2805.218 kb on + strand at 2805.251 kb on - strand, within BWI76_RS13450 at 2805.798 kb on + strand, within BWI76_RS13455 at 2806.050 kb on - strand, within BWI76_RS13455 at 2806.363 kb on + strand, within BWI76_RS13455 at 2806.436 kb on - strand, within BWI76_RS13455 at 2806.725 kb on - strand, within BWI76_RS13455 at 2806.845 kb on + strand at 2806.883 kb on + strand at 2806.896 kb on - strand at 2807.133 kb on + strand at 2807.182 kb on - strand at 2807.228 kb on + strand at 2807.321 kb on - strand at 2807.460 kb on - strand, within BWI76_RS13460 at 2807.462 kb on + strand, within BWI76_RS13460 at 2807.462 kb on + strand, within BWI76_RS13460 at 2807.462 kb on + strand, within BWI76_RS13460 at 2807.462 kb on + strand, within BWI76_RS13460 at 2807.462 kb on + strand, within BWI76_RS13460 at 2807.470 kb on - strand, within BWI76_RS13460 at 2807.541 kb on + strand, within BWI76_RS13460 at 2807.737 kb on + strand at 2807.745 kb on - strand, within BWI76_RS13460
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1 remove 2,804,578 + BWI76_RS13450 0.28 +0.1 2,804,645 + BWI76_RS13450 0.34 -0.2 2,804,797 + BWI76_RS13450 0.46 +1.0 2,804,846 - BWI76_RS13450 0.50 -0.1 2,804,846 - BWI76_RS13450 0.50 -0.5 2,805,218 + +1.7 2,805,251 - BWI76_RS13450 0.82 -1.1 2,805,798 + BWI76_RS13455 0.22 -0.3 2,806,050 - BWI76_RS13455 0.40 +1.2 2,806,363 + BWI76_RS13455 0.62 -0.2 2,806,436 - BWI76_RS13455 0.67 -0.3 2,806,725 - BWI76_RS13455 0.87 -0.4 2,806,845 + +1.4 2,806,883 + -0.8 2,806,896 - +0.2 2,807,133 + +0.7 2,807,182 - -0.4 2,807,228 + -0.9 2,807,321 - +2.4 2,807,460 - BWI76_RS13460 0.17 -0.5 2,807,462 + BWI76_RS13460 0.17 +0.2 2,807,462 + BWI76_RS13460 0.17 +1.2 2,807,462 + BWI76_RS13460 0.17 +0.5 2,807,462 + BWI76_RS13460 0.17 +0.6 2,807,462 + BWI76_RS13460 0.17 +0.0 2,807,470 - BWI76_RS13460 0.18 -0.3 2,807,541 + BWI76_RS13460 0.22 +1.1 2,807,737 + -0.3 2,807,745 - BWI76_RS13460 0.35 -0.1
Or see this region's nucleotide sequence