Experiment: K. M5a1 KLEB23 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13845 and BWI76_RS13850 overlap by 1 nucleotides BWI76_RS13850 and BWI76_RS13855 are separated by 79 nucleotides BWI76_RS13855 and BWI76_RS13860 are separated by 115 nucleotides
BWI76_RS13845: BWI76_RS13845 - LysR family transcriptional regulator, at 2,888,335 to 2,889,237
_RS13845
BWI76_RS13850: BWI76_RS13850 - N-acetyltransferase, at 2,889,237 to 2,889,716
_RS13850
BWI76_RS13855: BWI76_RS13855 - peroxiredoxin, at 2,889,796 to 2,890,227
_RS13855
BWI76_RS13860: BWI76_RS13860 - hypothetical protein, at 2,890,343 to 2,891,212
_RS13860
Position (kb)
2889
2890 Strain fitness (log2 ratio)
-2
-1
0
1 at 2888.340 kb on - strand at 2888.441 kb on + strand, within BWI76_RS13845 at 2888.468 kb on + strand, within BWI76_RS13845 at 2888.608 kb on - strand, within BWI76_RS13845 at 2888.681 kb on + strand, within BWI76_RS13845 at 2888.820 kb on + strand, within BWI76_RS13845 at 2888.820 kb on + strand, within BWI76_RS13845 at 2889.458 kb on + strand, within BWI76_RS13850 at 2889.509 kb on - strand, within BWI76_RS13850 at 2889.546 kb on + strand, within BWI76_RS13850 at 2889.654 kb on - strand, within BWI76_RS13850 at 2889.718 kb on - strand at 2889.763 kb on - strand at 2889.919 kb on + strand, within BWI76_RS13855 at 2889.989 kb on + strand, within BWI76_RS13855 at 2890.008 kb on + strand, within BWI76_RS13855 at 2890.215 kb on + strand at 2890.256 kb on + strand at 2890.423 kb on + strand at 2890.608 kb on - strand, within BWI76_RS13860
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 0.1 remove 2,888,340 - +0.7 2,888,441 + BWI76_RS13845 0.12 -0.4 2,888,468 + BWI76_RS13845 0.15 -0.1 2,888,608 - BWI76_RS13845 0.30 +0.9 2,888,681 + BWI76_RS13845 0.38 +0.0 2,888,820 + BWI76_RS13845 0.54 -0.5 2,888,820 + BWI76_RS13845 0.54 +0.3 2,889,458 + BWI76_RS13850 0.46 -0.1 2,889,509 - BWI76_RS13850 0.57 +1.2 2,889,546 + BWI76_RS13850 0.64 +0.7 2,889,654 - BWI76_RS13850 0.87 +0.7 2,889,718 - +0.0 2,889,763 - -0.0 2,889,919 + BWI76_RS13855 0.28 -0.6 2,889,989 + BWI76_RS13855 0.45 +0.0 2,890,008 + BWI76_RS13855 0.49 +0.2 2,890,215 + +0.2 2,890,256 + +0.1 2,890,423 + -2.6 2,890,608 - BWI76_RS13860 0.30 +0.4
Or see this region's nucleotide sequence