Experiment: B3 MOi 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14265 and BWI76_RS14270 are separated by 365 nucleotides BWI76_RS14270 and BWI76_RS14275 are separated by 387 nucleotides
BWI76_RS14265: BWI76_RS14265 - LysR family transcriptional regulator, at 2,983,089 to 2,984,027
_RS14265
BWI76_RS14270: BWI76_RS14270 - transporter, at 2,984,393 to 2,985,205
_RS14270
BWI76_RS14275: BWI76_RS14275 - hypothetical protein, at 2,985,593 to 2,986,789
_RS14275
Position (kb)
2984
2985
2986 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2983.406 kb on - strand, within BWI76_RS14265 at 2983.534 kb on + strand, within BWI76_RS14265 at 2983.636 kb on + strand, within BWI76_RS14265 at 2983.757 kb on + strand, within BWI76_RS14265 at 2983.757 kb on + strand, within BWI76_RS14265 at 2983.757 kb on + strand, within BWI76_RS14265 at 2983.765 kb on - strand, within BWI76_RS14265 at 2983.819 kb on + strand, within BWI76_RS14265 at 2983.862 kb on - strand, within BWI76_RS14265 at 2983.862 kb on - strand, within BWI76_RS14265 at 2983.872 kb on - strand, within BWI76_RS14265 at 2983.993 kb on - strand at 2984.010 kb on + strand at 2984.020 kb on + strand at 2984.022 kb on + strand at 2984.029 kb on - strand at 2984.478 kb on - strand, within BWI76_RS14270 at 2984.538 kb on - strand, within BWI76_RS14270 at 2984.642 kb on - strand, within BWI76_RS14270 at 2984.673 kb on + strand, within BWI76_RS14270 at 2984.673 kb on + strand, within BWI76_RS14270 at 2984.775 kb on + strand, within BWI76_RS14270 at 2984.835 kb on - strand at 2984.938 kb on + strand, within BWI76_RS14270 at 2985.009 kb on + strand, within BWI76_RS14270 at 2985.033 kb on + strand, within BWI76_RS14270 at 2985.267 kb on + strand at 2985.269 kb on + strand at 2985.269 kb on + strand at 2985.270 kb on - strand at 2985.277 kb on - strand at 2985.386 kb on + strand at 2985.423 kb on - strand at 2985.449 kb on + strand at 2985.449 kb on + strand at 2985.449 kb on + strand at 2985.449 kb on + strand at 2985.449 kb on + strand at 2985.450 kb on + strand at 2985.457 kb on - strand at 2985.457 kb on - strand at 2985.465 kb on - strand at 2985.495 kb on + strand at 2985.495 kb on + strand at 2985.495 kb on + strand at 2985.495 kb on + strand at 2985.495 kb on + strand at 2985.495 kb on + strand at 2985.501 kb on + strand at 2985.503 kb on + strand at 2985.514 kb on + strand at 2985.522 kb on - strand at 2985.661 kb on + strand at 2985.707 kb on - strand at 2985.748 kb on - strand, within BWI76_RS14275 at 2985.754 kb on - strand, within BWI76_RS14275 at 2985.868 kb on + strand, within BWI76_RS14275 at 2985.882 kb on - strand, within BWI76_RS14275 at 2986.088 kb on + strand, within BWI76_RS14275
Per-strain Table
Position Strand Gene LocusTag Fraction B3 MOi 10 remove 2,983,406 - BWI76_RS14265 0.34 -0.9 2,983,534 + BWI76_RS14265 0.47 +1.8 2,983,636 + BWI76_RS14265 0.58 +0.7 2,983,757 + BWI76_RS14265 0.71 +0.4 2,983,757 + BWI76_RS14265 0.71 +2.4 2,983,757 + BWI76_RS14265 0.71 +1.4 2,983,765 - BWI76_RS14265 0.72 -0.6 2,983,819 + BWI76_RS14265 0.78 -0.6 2,983,862 - BWI76_RS14265 0.82 -0.2 2,983,862 - BWI76_RS14265 0.82 -0.6 2,983,872 - BWI76_RS14265 0.83 +0.7 2,983,993 - +0.4 2,984,010 + -1.8 2,984,020 + +0.2 2,984,022 + -0.1 2,984,029 - -1.9 2,984,478 - BWI76_RS14270 0.10 -1.1 2,984,538 - BWI76_RS14270 0.18 -0.9 2,984,642 - BWI76_RS14270 0.31 +0.3 2,984,673 + BWI76_RS14270 0.34 +0.1 2,984,673 + BWI76_RS14270 0.34 +0.8 2,984,775 + BWI76_RS14270 0.47 -0.5 2,984,835 - +0.4 2,984,938 + BWI76_RS14270 0.67 +0.3 2,985,009 + BWI76_RS14270 0.76 -0.3 2,985,033 + BWI76_RS14270 0.79 -2.2 2,985,267 + -2.2 2,985,269 + +1.4 2,985,269 + +0.4 2,985,270 - -0.7 2,985,277 - +0.1 2,985,386 + +1.4 2,985,423 - -1.1 2,985,449 + +2.6 2,985,449 + -0.6 2,985,449 + -0.2 2,985,449 + -0.0 2,985,449 + +1.7 2,985,450 + +0.5 2,985,457 - +2.4 2,985,457 - -0.2 2,985,465 - +0.4 2,985,495 + +2.6 2,985,495 + -0.7 2,985,495 + -0.6 2,985,495 + +0.1 2,985,495 + +0.5 2,985,495 + -0.6 2,985,501 + +1.6 2,985,503 + -0.7 2,985,514 + -1.5 2,985,522 - +1.4 2,985,661 + -0.5 2,985,707 - -1.1 2,985,748 - BWI76_RS14275 0.13 +3.4 2,985,754 - BWI76_RS14275 0.13 -0.8 2,985,868 + BWI76_RS14275 0.23 +0.4 2,985,882 - BWI76_RS14275 0.24 +0.7 2,986,088 + BWI76_RS14275 0.41 +2.0
Or see this region's nucleotide sequence