Experiment: KLEB29 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02710 and BWI76_RS02715 are separated by 75 nucleotides BWI76_RS02715 and BWI76_RS02720 are separated by 80 nucleotides
BWI76_RS02710: BWI76_RS02710 - EamA family transporter, at 549,134 to 550,105
_RS02710
BWI76_RS02715: BWI76_RS02715 - putative helix-turn-helix AraC-type transcriptional regulator, at 550,181 to 551,005
_RS02715
BWI76_RS02720: BWI76_RS02720 - NAD(P)-dependent oxidoreductase, at 551,086 to 551,934
_RS02720
Position (kb) 550
551
552 Strain fitness (log2 ratio) -2
-1
0
1
2 at 549.182 kb on + strand at 549.280 kb on - strand, within BWI76_RS02710 at 549.395 kb on + strand, within BWI76_RS02710 at 549.408 kb on - strand, within BWI76_RS02710 at 549.432 kb on - strand, within BWI76_RS02710 at 549.573 kb on + strand, within BWI76_RS02710 at 549.583 kb on + strand, within BWI76_RS02710 at 549.591 kb on - strand, within BWI76_RS02710 at 549.591 kb on - strand, within BWI76_RS02710 at 549.602 kb on - strand, within BWI76_RS02710 at 549.711 kb on + strand, within BWI76_RS02710 at 549.716 kb on + strand, within BWI76_RS02710 at 549.857 kb on + strand, within BWI76_RS02710 at 549.857 kb on + strand, within BWI76_RS02710 at 549.857 kb on + strand, within BWI76_RS02710 at 549.959 kb on + strand, within BWI76_RS02710 at 550.138 kb on + strand at 550.138 kb on + strand at 550.224 kb on - strand at 550.235 kb on + strand at 550.247 kb on + strand at 550.255 kb on - strand at 550.255 kb on - strand at 550.521 kb on - strand, within BWI76_RS02715 at 550.654 kb on + strand, within BWI76_RS02715 at 550.761 kb on + strand, within BWI76_RS02715 at 550.789 kb on + strand, within BWI76_RS02715 at 550.818 kb on - strand, within BWI76_RS02715 at 550.881 kb on - strand, within BWI76_RS02715 at 550.896 kb on - strand, within BWI76_RS02715 at 550.896 kb on - strand, within BWI76_RS02715 at 550.985 kb on - strand at 551.229 kb on + strand, within BWI76_RS02720 at 551.237 kb on - strand, within BWI76_RS02720 at 551.237 kb on - strand, within BWI76_RS02720 at 551.318 kb on - strand, within BWI76_RS02720 at 551.341 kb on - strand, within BWI76_RS02720 at 551.543 kb on - strand, within BWI76_RS02720 at 551.604 kb on - strand, within BWI76_RS02720 at 551.666 kb on + strand, within BWI76_RS02720 at 551.854 kb on - strand at 551.901 kb on - strand at 551.937 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 1 remove 549,182 + -0.4 549,280 - BWI76_RS02710 0.15 -0.3 549,395 + BWI76_RS02710 0.27 +1.2 549,408 - BWI76_RS02710 0.28 +0.8 549,432 - BWI76_RS02710 0.31 -2.5 549,573 + BWI76_RS02710 0.45 +0.6 549,583 + BWI76_RS02710 0.46 +0.1 549,591 - BWI76_RS02710 0.47 +1.4 549,591 - BWI76_RS02710 0.47 -0.6 549,602 - BWI76_RS02710 0.48 -0.8 549,711 + BWI76_RS02710 0.59 +1.6 549,716 + BWI76_RS02710 0.60 +0.8 549,857 + BWI76_RS02710 0.74 +0.3 549,857 + BWI76_RS02710 0.74 -0.4 549,857 + BWI76_RS02710 0.74 +1.0 549,959 + BWI76_RS02710 0.85 +0.4 550,138 + -0.4 550,138 + +1.1 550,224 - -0.8 550,235 + +0.0 550,247 + +0.3 550,255 - +1.8 550,255 - +0.8 550,521 - BWI76_RS02715 0.41 +2.0 550,654 + BWI76_RS02715 0.57 +1.1 550,761 + BWI76_RS02715 0.70 -0.3 550,789 + BWI76_RS02715 0.74 +2.3 550,818 - BWI76_RS02715 0.77 +0.7 550,881 - BWI76_RS02715 0.85 +0.4 550,896 - BWI76_RS02715 0.87 -1.4 550,896 - BWI76_RS02715 0.87 +0.5 550,985 - -0.5 551,229 + BWI76_RS02720 0.17 -0.3 551,237 - BWI76_RS02720 0.18 -0.9 551,237 - BWI76_RS02720 0.18 +0.7 551,318 - BWI76_RS02720 0.27 +0.6 551,341 - BWI76_RS02720 0.30 -0.5 551,543 - BWI76_RS02720 0.54 -0.7 551,604 - BWI76_RS02720 0.61 +0.1 551,666 + BWI76_RS02720 0.68 -0.2 551,854 - -0.3 551,901 - -0.2 551,937 + -1.6
Or see this region's nucleotide sequence