Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22280
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 4,644,032 | + | BWI76_RS22275 | 0.61 | +0.0 | |
| 4,644,147 | - | BWI76_RS22275 | 0.66 | +0.1 | |
| 4,644,471 | + | BWI76_RS22275 | 0.81 | +2.0 | |
| 4,644,491 | - | BWI76_RS22275 | 0.82 | -0.5 | |
| 4,644,506 | + | BWI76_RS22275 | 0.82 | +0.6 | |
| 4,644,569 | + | BWI76_RS22275 | 0.85 | +0.1 | |
| 4,644,889 | - | -0.7 | |||
| 4,644,923 | - | +0.2 | |||
| 4,644,923 | - | -0.3 | |||
| 4,644,961 | - | -0.8 | |||
| 4,644,963 | + | BWI76_RS22280 | 0.10 | +0.6 | |
| 4,645,001 | + | BWI76_RS22280 | 0.17 | +0.5 | |
| 4,645,083 | - | BWI76_RS22280 | 0.33 | +0.1 | |
| 4,645,202 | + | BWI76_RS22280 | 0.55 | +0.7 | |
| 4,645,225 | + | BWI76_RS22280 | 0.60 | +0.4 | |
| 4,645,379 | + | BWI76_RS22280 | 0.89 | -0.1 | |
| 4,645,409 | - | -0.2 | |||
| 4,645,770 | + | BWI76_RS22285 | 0.20 | -0.4 | |
| 4,645,778 | - | BWI76_RS22285 | 0.20 | +0.6 | |
| 4,645,778 | - | BWI76_RS22285 | 0.20 | -2.0 | |
| 4,645,789 | + | BWI76_RS22285 | 0.21 | -0.1 | |
| 4,646,340 | + | BWI76_RS22285 | 0.76 | +0.3 | |
| 4,646,350 | - | BWI76_RS22285 | 0.77 | +0.5 | |
| 4,646,357 | + | BWI76_RS22285 | 0.78 | +0.7 |
Or see this region's nucleotide sequence