Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11350
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 2,390,229 | + | BWI76_RS11345 | 0.24 | +0.5 | |
| 2,390,595 | + | BWI76_RS11345 | 0.65 | -0.3 | |
| 2,390,605 | + | BWI76_RS11345 | 0.66 | -0.2 | |
| 2,390,859 | + | +0.2 | |||
| 2,391,025 | - | +1.2 | |||
| 2,391,135 | + | +0.0 | |||
| 2,391,175 | - | BWI76_RS11350 | 0.11 | +0.4 | |
| 2,391,383 | - | BWI76_RS11350 | 0.23 | +0.0 | |
| 2,391,388 | - | BWI76_RS11350 | 0.23 | +0.5 | |
| 2,391,547 | + | BWI76_RS11350 | 0.32 | +0.1 | |
| 2,391,620 | - | BWI76_RS11350 | 0.36 | +1.4 | |
| 2,391,740 | - | BWI76_RS11350 | 0.43 | -0.7 | |
| 2,392,705 | + | -0.0 | |||
| 2,392,714 | - | +0.3 | |||
| 2,392,742 | - | +0.4 | |||
| 2,392,819 | - | +0.3 | |||
| 2,392,946 | + | -0.0 | |||
| 2,393,191 | + | BWI76_RS11355 | 0.30 | -0.6 | |
| 2,393,291 | + | BWI76_RS11355 | 0.38 | -0.3 | |
| 2,393,352 | - | BWI76_RS11355 | 0.44 | +0.9 | |
| 2,393,354 | + | BWI76_RS11355 | 0.44 | +0.9 | |
| 2,393,362 | + | BWI76_RS11355 | 0.44 | +0.2 | |
| 2,393,362 | + | BWI76_RS11355 | 0.44 | +0.1 | |
| 2,393,535 | + | BWI76_RS11355 | 0.59 | +0.2 | |
| 2,393,543 | - | BWI76_RS11355 | 0.60 | +0.4 | |
| 2,393,679 | - | BWI76_RS11355 | 0.71 | +0.2 |
Or see this region's nucleotide sequence