Experiment: KLEB16 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10660 and BWI76_RS10665 are separated by 51 nucleotides BWI76_RS10665 and BWI76_RS10670 are separated by 20 nucleotides
BWI76_RS10660: BWI76_RS10660 - formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme, at 2,250,063 to 2,252,360
_RS10660
BWI76_RS10665: BWI76_RS10665 - PTS system fructose-like transporter subunit EIIB, at 2,252,412 to 2,252,732
_RS10665
BWI76_RS10670: BWI76_RS10670 - PTS fructose transporter subunit IIC, at 2,252,753 to 2,253,829
_RS10670
Position (kb)
2252
2253 Strain fitness (log2 ratio)
-2
-1
0
1 at 2251.606 kb on - strand, within BWI76_RS10660 at 2251.744 kb on - strand, within BWI76_RS10660 at 2251.746 kb on + strand, within BWI76_RS10660 at 2251.766 kb on - strand, within BWI76_RS10660 at 2251.904 kb on - strand, within BWI76_RS10660 at 2251.904 kb on - strand, within BWI76_RS10660 at 2251.948 kb on + strand, within BWI76_RS10660 at 2252.107 kb on + strand, within BWI76_RS10660 at 2252.677 kb on + strand, within BWI76_RS10665 at 2252.682 kb on + strand, within BWI76_RS10665 at 2252.685 kb on - strand, within BWI76_RS10665 at 2252.790 kb on + strand at 2252.823 kb on + strand at 2252.841 kb on - strand at 2252.934 kb on + strand, within BWI76_RS10670 at 2252.934 kb on + strand, within BWI76_RS10670 at 2252.980 kb on - strand, within BWI76_RS10670 at 2253.276 kb on + strand, within BWI76_RS10670 at 2253.676 kb on + strand, within BWI76_RS10670
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB16 MOI 0.1 remove 2,251,606 - BWI76_RS10660 0.67 -0.5 2,251,744 - BWI76_RS10660 0.73 +0.2 2,251,746 + BWI76_RS10660 0.73 -0.4 2,251,766 - BWI76_RS10660 0.74 +0.2 2,251,904 - BWI76_RS10660 0.80 +1.1 2,251,904 - BWI76_RS10660 0.80 +0.7 2,251,948 + BWI76_RS10660 0.82 -0.5 2,252,107 + BWI76_RS10660 0.89 -1.7 2,252,677 + BWI76_RS10665 0.83 -0.7 2,252,682 + BWI76_RS10665 0.84 -1.0 2,252,685 - BWI76_RS10665 0.85 -0.7 2,252,790 + +0.8 2,252,823 + +0.2 2,252,841 - -1.8 2,252,934 + BWI76_RS10670 0.17 +0.1 2,252,934 + BWI76_RS10670 0.17 -0.9 2,252,980 - BWI76_RS10670 0.21 -0.1 2,253,276 + BWI76_RS10670 0.49 +0.0 2,253,676 + BWI76_RS10670 0.86 +0.4
Or see this region's nucleotide sequence