Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27010 and BWI76_RS27015 overlap by 4 nucleotides BWI76_RS27015 and BWI76_RS27020 are separated by 168 nucleotides
BWI76_RS27010: BWI76_RS27010 - O-acetyltransferase, at 5,603,429 to 5,604,424
_RS27010
BWI76_RS27015: BWI76_RS27015 - hypothetical protein, at 5,604,421 to 5,604,801
_RS27015
BWI76_RS27020: BWI76_RS27020 - Xylulose kinase (EC 2.7.1.17) <small>(from data)</small>, at 5,604,970 to 5,606,424
_RS27020
Position (kb) 5604
5605 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5603.492 kb on + strand at 5603.529 kb on + strand, within BWI76_RS27010 at 5603.537 kb on - strand, within BWI76_RS27010 at 5603.701 kb on + strand, within BWI76_RS27010 at 5603.701 kb on + strand, within BWI76_RS27010 at 5603.725 kb on + strand, within BWI76_RS27010 at 5603.725 kb on + strand, within BWI76_RS27010 at 5603.733 kb on - strand, within BWI76_RS27010 at 5603.733 kb on - strand, within BWI76_RS27010 at 5603.835 kb on - strand, within BWI76_RS27010 at 5603.896 kb on + strand, within BWI76_RS27010 at 5603.904 kb on - strand, within BWI76_RS27010 at 5603.969 kb on - strand, within BWI76_RS27010 at 5603.990 kb on + strand, within BWI76_RS27010 at 5603.998 kb on - strand, within BWI76_RS27010 at 5604.043 kb on + strand, within BWI76_RS27010 at 5604.053 kb on + strand, within BWI76_RS27010 at 5604.056 kb on - strand, within BWI76_RS27010 at 5604.061 kb on - strand, within BWI76_RS27010 at 5604.061 kb on - strand, within BWI76_RS27010 at 5604.061 kb on - strand, within BWI76_RS27010 at 5604.203 kb on - strand at 5604.210 kb on + strand, within BWI76_RS27010 at 5604.364 kb on - strand at 5604.570 kb on + strand, within BWI76_RS27015 at 5604.594 kb on + strand, within BWI76_RS27015 at 5604.684 kb on + strand, within BWI76_RS27015 at 5604.759 kb on + strand, within BWI76_RS27015 at 5604.814 kb on + strand at 5604.814 kb on + strand at 5604.814 kb on + strand at 5604.814 kb on + strand at 5604.822 kb on - strand at 5604.822 kb on - strand at 5604.822 kb on - strand at 5604.822 kb on - strand at 5604.822 kb on - strand at 5604.893 kb on + strand at 5605.154 kb on + strand, within BWI76_RS27020 at 5605.330 kb on - strand, within BWI76_RS27020 at 5605.402 kb on + strand, within BWI76_RS27020 at 5605.429 kb on - strand, within BWI76_RS27020 at 5605.510 kb on + strand, within BWI76_RS27020 at 5605.518 kb on - strand, within BWI76_RS27020 at 5605.549 kb on + strand, within BWI76_RS27020
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 1 remove 5,603,492 + +0.5 5,603,529 + BWI76_RS27010 0.10 -0.4 5,603,537 - BWI76_RS27010 0.11 -2.1 5,603,701 + BWI76_RS27010 0.27 +1.3 5,603,701 + BWI76_RS27010 0.27 +0.6 5,603,725 + BWI76_RS27010 0.30 -0.7 5,603,725 + BWI76_RS27010 0.30 -0.2 5,603,733 - BWI76_RS27010 0.31 +0.6 5,603,733 - BWI76_RS27010 0.31 +1.0 5,603,835 - BWI76_RS27010 0.41 +0.1 5,603,896 + BWI76_RS27010 0.47 +1.6 5,603,904 - BWI76_RS27010 0.48 +0.5 5,603,969 - BWI76_RS27010 0.54 -0.3 5,603,990 + BWI76_RS27010 0.56 -0.7 5,603,998 - BWI76_RS27010 0.57 -0.5 5,604,043 + BWI76_RS27010 0.62 +0.4 5,604,053 + BWI76_RS27010 0.63 +0.2 5,604,056 - BWI76_RS27010 0.63 -1.7 5,604,061 - BWI76_RS27010 0.63 +0.8 5,604,061 - BWI76_RS27010 0.63 -2.8 5,604,061 - BWI76_RS27010 0.63 +0.1 5,604,203 - -1.5 5,604,210 + BWI76_RS27010 0.78 -0.5 5,604,364 - -1.0 5,604,570 + BWI76_RS27015 0.39 -0.1 5,604,594 + BWI76_RS27015 0.45 -1.9 5,604,684 + BWI76_RS27015 0.69 -1.4 5,604,759 + BWI76_RS27015 0.89 -0.2 5,604,814 + -1.5 5,604,814 + +0.4 5,604,814 + -0.9 5,604,814 + +0.1 5,604,822 - +0.4 5,604,822 - +1.3 5,604,822 - +0.3 5,604,822 - -0.6 5,604,822 - +0.4 5,604,893 + -1.3 5,605,154 + BWI76_RS27020 0.13 +1.0 5,605,330 - BWI76_RS27020 0.25 -0.1 5,605,402 + BWI76_RS27020 0.30 -0.2 5,605,429 - BWI76_RS27020 0.32 +1.3 5,605,510 + BWI76_RS27020 0.37 -0.2 5,605,518 - BWI76_RS27020 0.38 +0.4 5,605,549 + BWI76_RS27020 0.40 +0.4
Or see this region's nucleotide sequence