Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1447c

Experiment: 7H9 with para-aminosalicylic 0.086 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with para-aminosalicylic 0.086 ug/mL
1,624,449	-				-0.4
1,624,449	-				-0.5
1,624,449	-				-0.5
1,624,830	+		Rv1446c	0.41	+0.3
1,624,830	+		Rv1446c	0.41	-0.0
1,624,830	+		Rv1446c	0.41	-0.3
1,624,830	+		Rv1446c	0.41	-0.5
1,625,420	-				+0.1
1,625,484	-				+1.1
1,625,484	-				-1.0
1,625,626	+		Rv1447c	0.13	-0.1
1,625,882	-		Rv1447c	0.30	-1.0
1,626,542	-		Rv1447c	0.73	-0.5
1,626,542	-		Rv1447c	0.73	+1.1
1,626,719	-		Rv1447c	0.84	+0.3
1,626,719	-		Rv1447c	0.84	-0.5
1,627,002	-				-0.7
1,627,002	-				+0.8
1,627,227	+		Rv1448c	0.24	-1.4
1,627,228	-		Rv1448c	0.24	-0.4
1,627,357	-		Rv1448c	0.35	-0.5
1,627,854	-		Rv1448c	0.80	-0.5
1,627,896	+		Rv1448c	0.84	+0.6