Strain Fitness in Erwinia amylovora T8 around OLJFJH_12565

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1
2,642,184	-		OLJFJH_12555	0.77	+0.9
2,642,184	-		OLJFJH_12555	0.77	+2.7
2,642,227	-		OLJFJH_12555	0.83	-0.1
2,642,227	-		OLJFJH_12555	0.83	+0.1
2,642,230	-		OLJFJH_12555	0.83	-0.8
2,642,230	-		OLJFJH_12555	0.83	+0.4
2,642,391	-				-0.8
2,642,391	-				+1.1
2,642,442	-				-0.3
2,642,519	-		OLJFJH_12560	0.25	+2.0
2,642,624	+		OLJFJH_12560	0.46	-0.8
2,642,645	+		OLJFJH_12560	0.50	-0.1
2,642,646	-		OLJFJH_12560	0.50	-0.3
2,642,646	-		OLJFJH_12560	0.50	-1.3
2,642,657	-		OLJFJH_12560	0.52	-0.3
2,642,672	+		OLJFJH_12560	0.55	-2.2
2,642,673	-		OLJFJH_12560	0.56	-0.8
2,642,673	-		OLJFJH_12560	0.56	+1.8
2,642,717	+		OLJFJH_12560	0.64	-0.1
2,642,717	+		OLJFJH_12560	0.64	+0.2
2,642,843	+		OLJFJH_12560	0.89	-0.2
2,642,860	+				-1.8
2,642,860	+				-1.6
2,642,860	+				+0.1
2,642,861	-				-0.6
2,642,864	+				+1.2
2,642,890	+				-0.6
2,642,890	+				+0.3
2,642,890	+				-0.5
2,642,890	+				-0.1
2,642,891	-				-0.2
2,642,894	+				-0.3
2,642,895	-				-0.0
2,642,895	-				+1.6
2,642,895	-				+0.3
2,642,895	-				-0.1
2,642,895	-				+0.2
2,642,895	-				-0.8
2,642,956	-				+0.3
2,642,966	+				+0.1
2,642,967	-				+0.1
2,642,993	+				-0.3
2,642,994	-				-0.2
2,643,081	-				-1.5
2,643,127	+				+0.9
2,643,127	+				+0.1
2,643,128	-				-0.7
2,643,128	-				-0.0
2,643,148	+				-0.1
2,643,362	+		OLJFJH_12565	0.44	+1.5
2,643,594	-		OLJFJH_12565	0.83	+1.4
2,643,808	+				+0.6
2,643,809	-				-0.2
2,644,032	+				-1.1
2,644,032	+				+1.1
2,644,042	-				+0.4
2,644,063	+				+0.1
2,644,102	+		OLJFJH_12570	0.12	-0.0
2,644,262	+		OLJFJH_12570	0.26	+1.6
2,644,263	-		OLJFJH_12570	0.26	-0.4
2,644,263	-		OLJFJH_12570	0.26	+0.4
2,644,421	+		OLJFJH_12570	0.41	-0.3
2,644,437	-		OLJFJH_12570	0.42	+0.1
2,644,437	-		OLJFJH_12570	0.42	+0.2
2,644,460	+		OLJFJH_12570	0.44	-1.2
2,644,460	+		OLJFJH_12570	0.44	+4.5
2,644,461	-		OLJFJH_12570	0.44	+1.2
2,644,497	+		OLJFJH_12570	0.48	+0.8
2,644,506	-		OLJFJH_12570	0.49	-0.2
2,644,506	-		OLJFJH_12570	0.49	-0.4
2,644,506	-		OLJFJH_12570	0.49	+0.0
2,644,563	-		OLJFJH_12570	0.54	-0.1
2,644,563	-		OLJFJH_12570	0.54	+0.5
2,644,611	+		OLJFJH_12570	0.58	-0.6
2,644,693	-		OLJFJH_12570	0.66	-0.5