Experiment: Cobalt chloride 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15495 and SGL_RS15500 are separated by 172 nucleotides SGL_RS15500 and SGL_RS15505 overlap by 4 nucleotides SGL_RS15505 and SGL_RS15510 overlap by 4 nucleotides
SGL_RS15495: SGL_RS15495 - Fe(3+) ABC transporter substrate-binding protein, at 2,924,779 to 2,925,819
_RS15495
SGL_RS15500: SGL_RS15500 - hypothetical protein, at 2,925,992 to 2,926,786
_RS15500
SGL_RS15505: SGL_RS15505 - pentapeptide repeat-containing protein, at 2,926,783 to 2,927,283
_RS15505
SGL_RS15510: SGL_RS15510 - ATP-binding protein, at 2,927,280 to 2,929,700
_RS15510
Position (kb)
2926
2927
2928 Strain fitness (log2 ratio)
-2
-1
0
1 at 2925.909 kb on - strand at 2926.053 kb on + strand at 2926.084 kb on - strand, within SGL_RS15500 at 2926.248 kb on - strand, within SGL_RS15500 at 2926.248 kb on - strand, within SGL_RS15500 at 2926.248 kb on - strand, within SGL_RS15500 at 2926.343 kb on + strand, within SGL_RS15500 at 2926.351 kb on - strand, within SGL_RS15500 at 2926.429 kb on - strand, within SGL_RS15500 at 2926.489 kb on - strand, within SGL_RS15500 at 2926.510 kb on - strand, within SGL_RS15500 at 2926.544 kb on - strand, within SGL_RS15500 at 2926.544 kb on - strand, within SGL_RS15500 at 2926.571 kb on + strand, within SGL_RS15500 at 2926.600 kb on - strand, within SGL_RS15500 at 2926.623 kb on + strand, within SGL_RS15500 at 2926.916 kb on - strand, within SGL_RS15505 at 2927.025 kb on - strand, within SGL_RS15505 at 2927.102 kb on + strand, within SGL_RS15505 at 2927.115 kb on - strand, within SGL_RS15505 at 2927.182 kb on + strand, within SGL_RS15505 at 2927.182 kb on + strand, within SGL_RS15505 at 2927.201 kb on - strand, within SGL_RS15505 at 2927.399 kb on + strand at 2927.847 kb on + strand, within SGL_RS15510 at 2927.847 kb on + strand, within SGL_RS15510 at 2927.964 kb on + strand, within SGL_RS15510 at 2927.972 kb on + strand, within SGL_RS15510
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 5 uM remove 2,925,909 - -0.6 2,926,053 + -0.5 2,926,084 - SGL_RS15500 0.12 -1.4 2,926,248 - SGL_RS15500 0.32 -1.0 2,926,248 - SGL_RS15500 0.32 -1.1 2,926,248 - SGL_RS15500 0.32 -1.3 2,926,343 + SGL_RS15500 0.44 -0.9 2,926,351 - SGL_RS15500 0.45 -0.9 2,926,429 - SGL_RS15500 0.55 -1.5 2,926,489 - SGL_RS15500 0.63 -0.8 2,926,510 - SGL_RS15500 0.65 -1.2 2,926,544 - SGL_RS15500 0.69 -2.0 2,926,544 - SGL_RS15500 0.69 -0.9 2,926,571 + SGL_RS15500 0.73 -1.3 2,926,600 - SGL_RS15500 0.76 -1.1 2,926,623 + SGL_RS15500 0.79 -1.1 2,926,916 - SGL_RS15505 0.27 -1.2 2,927,025 - SGL_RS15505 0.48 -1.3 2,927,102 + SGL_RS15505 0.64 -1.1 2,927,115 - SGL_RS15505 0.66 -1.4 2,927,182 + SGL_RS15505 0.80 -1.8 2,927,182 + SGL_RS15505 0.80 -1.7 2,927,201 - SGL_RS15505 0.83 -0.9 2,927,399 + -0.0 2,927,847 + SGL_RS15510 0.23 -0.0 2,927,847 + SGL_RS15510 0.23 +0.0 2,927,964 + SGL_RS15510 0.28 -0.2 2,927,972 + SGL_RS15510 0.29 -0.0
Or see this region's nucleotide sequence