Experiment: Cobalt chloride 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS04505 and SGL_RS04510 are separated by 133 nucleotides SGL_RS04510 and SGL_RS04515 are separated by 177 nucleotides
SGL_RS04505: SGL_RS04505 - phospholipid carrier-dependent glycosyltransferase, at 563,448 to 565,925
_RS04505
SGL_RS04510: SGL_RS04510 - DUF561 domain-containing protein, at 566,059 to 566,805
_RS04510
SGL_RS04515: SGL_RS04515 - 1-deoxy-D-xylulose-5-phosphate synthase, at 566,983 to 568,905
_RS04515
Position (kb) 566
567 Strain fitness (log2 ratio) -2
-1
0
1 at 565.066 kb on - strand, within SGL_RS04505 at 565.066 kb on - strand, within SGL_RS04505 at 565.066 kb on - strand, within SGL_RS04505 at 565.077 kb on - strand, within SGL_RS04505 at 565.180 kb on + strand, within SGL_RS04505 at 565.368 kb on - strand, within SGL_RS04505 at 565.444 kb on + strand, within SGL_RS04505 at 565.454 kb on + strand, within SGL_RS04505 at 565.466 kb on + strand, within SGL_RS04505 at 565.532 kb on + strand, within SGL_RS04505 at 565.578 kb on + strand, within SGL_RS04505 at 565.578 kb on + strand, within SGL_RS04505 at 565.586 kb on - strand, within SGL_RS04505 at 565.606 kb on + strand, within SGL_RS04505 at 565.615 kb on + strand, within SGL_RS04505 at 565.691 kb on - strand at 565.818 kb on + strand at 565.884 kb on - strand at 565.931 kb on + strand at 566.013 kb on + strand at 566.036 kb on + strand at 566.173 kb on + strand, within SGL_RS04510 at 566.253 kb on + strand, within SGL_RS04510 at 566.423 kb on - strand, within SGL_RS04510 at 566.542 kb on + strand, within SGL_RS04510 at 566.704 kb on - strand, within SGL_RS04510 at 566.781 kb on + strand at 566.909 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 5 uM remove 565,066 - SGL_RS04505 0.65 -0.3 565,066 - SGL_RS04505 0.65 -0.3 565,066 - SGL_RS04505 0.65 -1.3 565,077 - SGL_RS04505 0.66 -0.3 565,180 + SGL_RS04505 0.70 -0.1 565,368 - SGL_RS04505 0.77 -0.5 565,444 + SGL_RS04505 0.81 -0.1 565,454 + SGL_RS04505 0.81 -0.1 565,466 + SGL_RS04505 0.81 -0.7 565,532 + SGL_RS04505 0.84 +0.3 565,578 + SGL_RS04505 0.86 -0.2 565,578 + SGL_RS04505 0.86 -0.2 565,586 - SGL_RS04505 0.86 +0.0 565,606 + SGL_RS04505 0.87 -0.1 565,615 + SGL_RS04505 0.87 +1.3 565,691 - +0.7 565,818 + -0.1 565,884 - +0.6 565,931 + +0.3 566,013 + +0.0 566,036 + -0.1 566,173 + SGL_RS04510 0.15 -0.7 566,253 + SGL_RS04510 0.26 -1.6 566,423 - SGL_RS04510 0.49 -1.6 566,542 + SGL_RS04510 0.65 -0.7 566,704 - SGL_RS04510 0.86 -1.9 566,781 + +0.4 566,909 + -0.3
Or see this region's nucleotide sequence