Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18535

Experiment: Experiment:TE2, Cucumber 1 Main Stem (TE2-S-C1-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 1 Main Stem (TE2-S-C1-MS)
3,502,986	+				-2.5
3,503,415	-				-0.1
3,503,506	-				+3.5
3,503,526	+				-0.7
3,503,527	-				+0.5
3,503,527	-				+2.5
3,503,561	+				-1.1
3,503,656	-				+1.9
3,503,727	+				-0.0
3,503,728	-				-1.8
3,503,787	+		LU632_RS18535	0.12	+0.3
3,503,788	-		LU632_RS18535	0.12	-1.7
3,503,943	-		LU632_RS18535	0.19	+1.8
3,503,947	+		LU632_RS18535	0.19	+1.6
3,504,025	+		LU632_RS18535	0.23	+0.3
3,504,025	+		LU632_RS18535	0.23	-1.7
3,504,058	-		LU632_RS18535	0.25	+1.9
3,504,062	-		LU632_RS18535	0.25	+0.3
3,504,116	+		LU632_RS18535	0.28	-0.2
3,504,116	+		LU632_RS18535	0.28	-0.3
3,504,116	+		LU632_RS18535	0.28	+0.0
3,504,295	-		LU632_RS18535	0.37	-2.2
3,504,295	-		LU632_RS18535	0.37	+0.9
3,504,350	+		LU632_RS18535	0.39	-1.2
3,504,351	-		LU632_RS18535	0.39	-0.4
3,504,359	-		LU632_RS18535	0.40	-1.4
3,504,431	+		LU632_RS18535	0.43	-1.8
3,504,432	-		LU632_RS18535	0.44	+0.4
3,504,432	-		LU632_RS18535	0.44	-2.6
3,504,434	+		LU632_RS18535	0.44	+0.3
3,504,434	+		LU632_RS18535	0.44	+1.7
3,504,434	+		LU632_RS18535	0.44	+1.1
3,504,434	+		LU632_RS18535	0.44	-1.2
3,504,435	+		LU632_RS18535	0.44	+3.8
3,504,435	-		LU632_RS18535	0.44	+1.2
3,504,435	-		LU632_RS18535	0.44	+1.8
3,504,435	-		LU632_RS18535	0.44	+0.7
3,504,435	-		LU632_RS18535	0.44	-0.1
3,504,435	-		LU632_RS18535	0.44	-2.1
3,504,435	-		LU632_RS18535	0.44	-0.7
3,504,435	-		LU632_RS18535	0.44	-0.4
3,504,435	-		LU632_RS18535	0.44	+1.3
3,504,436	+		LU632_RS18535	0.44	+0.1
3,504,436	+		LU632_RS18535	0.44	-1.1
3,504,436	+		LU632_RS18535	0.44	+1.9
3,504,437	-		LU632_RS18535	0.44	+0.6
3,504,437	-		LU632_RS18535	0.44	+0.7
3,504,437	-		LU632_RS18535	0.44	-1.1
3,504,481	+		LU632_RS18535	0.46	+1.6
3,504,482	-		LU632_RS18535	0.46	-2.1
3,504,567	+		LU632_RS18535	0.50	-1.1
3,504,567	+		LU632_RS18535	0.50	+0.3
3,504,568	-		LU632_RS18535	0.50	+1.3
3,504,572	-		LU632_RS18535	0.50	+0.7
3,504,618	+		LU632_RS18535	0.53	-0.8
3,504,710	-		LU632_RS18535	0.57	-0.7
3,504,783	+		LU632_RS18535	0.61	+2.1
3,505,001	-		LU632_RS18535	0.72	-2.1
3,505,016	+		LU632_RS18535	0.72	-0.4
3,505,016	+		LU632_RS18535	0.72	-0.4
3,505,016	+		LU632_RS18535	0.72	+0.2
3,505,017	-		LU632_RS18535	0.73	+0.1
3,505,028	-		LU632_RS18535	0.73	-1.1
3,505,103	+		LU632_RS18535	0.77	-0.9
3,505,103	+		LU632_RS18535	0.77	+0.0
3,505,174	+		LU632_RS18535	0.80	-0.5
3,505,181	-		LU632_RS18535	0.81	-1.4
3,505,186	+		LU632_RS18535	0.81	+0.6
3,505,366	+		LU632_RS18535	0.90	+2.3
3,505,366	-		LU632_RS18535	0.90	+1.0
3,505,568	+				-1.4
3,505,568	+				-2.6
3,505,569	-				-1.4
3,505,596	-				-0.7
3,505,596	-				+0.5
3,505,607	+				+0.8
3,505,607	+				+0.3
3,505,665	-		LU632_RS18540	0.20	+1.1
3,505,775	+		LU632_RS18540	0.46	-0.1
3,505,790	+		LU632_RS18540	0.50	-1.6
3,505,791	-		LU632_RS18540	0.50	-1.2
3,505,791	-		LU632_RS18540	0.50	+0.3
3,505,796	+		LU632_RS18540	0.51	-1.4
3,505,834	-		LU632_RS18540	0.60	+0.9
3,505,958	-		LU632_RS18540	0.90	-1.5
3,505,980	-				+1.0
3,506,011	+				+2.9
3,506,012	-				+0.2
3,506,012	-				-0.4
3,506,013	+				+0.3
3,506,016	+				-1.6
3,506,045	+				-0.4
3,506,045	+				+0.9
3,506,109	+				-0.9
3,506,158	-				-1.1
3,506,158	-				+1.7
3,506,296	-				-2.0
3,506,346	-				+0.5
3,506,458	-				-0.7