Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03589

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
3,776,906	-		MPMX20_03587	0.37	+2.0
3,776,917	-		MPMX20_03587	0.38	+0.2
3,776,917	-		MPMX20_03587	0.38	-0.5
3,776,988	-		MPMX20_03587	0.45	-0.1
3,777,011	+		MPMX20_03587	0.48	-2.3
3,777,018	+		MPMX20_03587	0.49	-0.4
3,777,018	+		MPMX20_03587	0.49	-0.2
3,777,026	-		MPMX20_03587	0.49	+3.9
3,777,037	+		MPMX20_03587	0.51	-0.8
3,777,061	+		MPMX20_03587	0.53	+1.4
3,777,159	+		MPMX20_03587	0.63	+0.5
3,777,178	+		MPMX20_03587	0.65	+0.6
3,777,197	-		MPMX20_03587	0.67	+0.5
3,777,211	-		MPMX20_03587	0.69	-0.4
3,777,216	-		MPMX20_03587	0.69	-0.5
3,777,216	-		MPMX20_03587	0.69	-1.2
3,777,265	+		MPMX20_03587	0.74	+1.6
3,777,273	-		MPMX20_03587	0.75	+0.5
3,777,273	-		MPMX20_03587	0.75	+0.9
3,777,273	-		MPMX20_03587	0.75	+1.6
3,777,273	-		MPMX20_03587	0.75	+0.1
3,777,285	-		MPMX20_03587	0.76	+2.3
3,777,381	+		MPMX20_03587	0.86	+1.3
3,777,401	+		MPMX20_03587	0.88	+0.7
3,777,401	+		MPMX20_03587	0.88	-2.8
3,777,401	+		MPMX20_03587	0.88	+0.4
3,777,409	-		MPMX20_03587	0.89	-0.8
3,777,413	-		MPMX20_03587	0.90	+0.0
3,777,429	+				-2.7
3,777,439	+				+0.3
3,777,563	-		MPMX20_03588	0.11	-0.5
3,777,568	-		MPMX20_03588	0.12	-0.9
3,777,645	-		MPMX20_03588	0.33	+2.1
3,777,676	+		MPMX20_03588	0.42	-1.5
3,777,676	+		MPMX20_03588	0.42	-0.9
3,777,690	-		MPMX20_03588	0.46	-0.1
3,777,747	+		MPMX20_03588	0.61	-0.0
3,777,847	+		MPMX20_03588	0.89	-0.5
3,777,857	-				-0.7
3,777,868	-				-1.1
3,777,976	+				+0.1
3,777,976	+				+0.6
3,777,976	+				+3.3
3,777,976	+				+0.4
3,777,976	+				+2.5
3,777,984	-		MPMX20_03589	0.11	+1.0
3,777,984	-		MPMX20_03589	0.11	+0.0
3,777,984	-		MPMX20_03589	0.11	-1.6
3,777,984	-		MPMX20_03589	0.11	-0.2
3,777,984	-		MPMX20_03589	0.11	+0.4
3,778,060	-		MPMX20_03589	0.20	+1.1
3,778,089	+		MPMX20_03589	0.24	-0.0
3,778,152	+		MPMX20_03589	0.32	+0.0
3,778,162	-		MPMX20_03589	0.33	+0.8
3,778,162	-		MPMX20_03589	0.33	-1.3
3,778,162	-		MPMX20_03589	0.33	-0.0
3,778,164	+		MPMX20_03589	0.34	+0.2
3,778,164	+		MPMX20_03589	0.34	+1.6
3,778,169	+		MPMX20_03589	0.34	+2.6
3,778,172	-		MPMX20_03589	0.35	-0.9
3,778,205	-		MPMX20_03589	0.39	-1.6
3,778,231	+		MPMX20_03589	0.42	-0.7
3,778,231	+		MPMX20_03589	0.42	-1.0
3,778,361	-		MPMX20_03589	0.59	+1.2
3,778,361	-		MPMX20_03589	0.59	+1.8
3,778,383	+		MPMX20_03589	0.62	+0.3
3,778,391	-		MPMX20_03589	0.63	+2.4
3,778,535	+		MPMX20_03589	0.81	+0.3
3,778,540	+		MPMX20_03589	0.82	-0.5
3,778,548	-		MPMX20_03589	0.83	-0.3
3,778,548	-		MPMX20_03589	0.83	+0.1
3,778,635	+				+0.6
3,778,635	+				-1.5
3,778,655	-				-1.1
3,778,662	+				-1.3
3,778,683	-				-1.6
3,778,852	-		MPMX20_03590	0.30	-1.6
3,778,852	-		MPMX20_03590	0.30	+0.6
3,778,917	-		MPMX20_03590	0.48	-2.5
3,778,968	-		MPMX20_03590	0.62	-3.1
3,779,057	-		MPMX20_03590	0.87	-1.5
3,779,067	-				+0.0
3,779,265	-		MPMX20_03591	0.13	-2.1
3,779,329	+		MPMX20_03591	0.21	+0.3
3,779,337	-		MPMX20_03591	0.22	+1.0
3,779,381	+		MPMX20_03591	0.28	-0.9
3,779,389	-		MPMX20_03591	0.29	+0.6
3,779,389	-		MPMX20_03591	0.29	-2.2
3,779,446	+		MPMX20_03591	0.36	-2.7
3,779,470	-		MPMX20_03591	0.39	-2.2
3,779,470	-		MPMX20_03591	0.39	-1.2
3,779,558	+		MPMX20_03591	0.51	-1.5
3,779,558	-		MPMX20_03591	0.51	-1.5
3,779,670	+		MPMX20_03591	0.65	-1.3
3,779,678	-		MPMX20_03591	0.66	-2.8