Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01291

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
1,350,622	-		MPMX20_01289	0.61	+0.4
1,350,795	+		MPMX20_01289	0.88	-0.1
1,350,808	-				+0.1
1,350,966	+				+0.5
1,350,974	-				-0.4
1,351,505	+		MPMX20_01291	0.14	-1.4
1,351,505	+		MPMX20_01291	0.14	+0.9
1,351,505	+		MPMX20_01291	0.14	-0.6
1,351,505	+		MPMX20_01291	0.14	-2.5
1,351,513	-		MPMX20_01291	0.15	-3.2
1,351,513	-		MPMX20_01291	0.15	-0.7
1,351,513	-		MPMX20_01291	0.15	-0.1
1,351,513	-		MPMX20_01291	0.15	+0.4
1,351,518	-		MPMX20_01291	0.15	-0.2
1,351,523	-		MPMX20_01291	0.16	-0.6
1,351,576	-		MPMX20_01291	0.20	+0.7
1,351,577	-		MPMX20_01291	0.20	-0.8
1,351,600	-		MPMX20_01291	0.22	-2.8
1,351,600	-		MPMX20_01291	0.22	-0.7
1,351,604	+		MPMX20_01291	0.22	-0.6
1,351,612	-		MPMX20_01291	0.23	-1.9
1,351,618	-		MPMX20_01291	0.23	-1.5
1,351,684	+		MPMX20_01291	0.29	-0.4
1,351,760	-		MPMX20_01291	0.35	-0.2
1,351,760	-		MPMX20_01291	0.35	-0.6
1,351,769	-		MPMX20_01291	0.36	-0.4
1,351,769	-		MPMX20_01291	0.36	+2.7
1,351,769	-		MPMX20_01291	0.36	-1.1
1,351,965	-		MPMX20_01291	0.52	-0.7
1,351,978	+		MPMX20_01291	0.53	-1.7
1,351,978	+		MPMX20_01291	0.53	-2.3
1,351,981	-		MPMX20_01291	0.53	-3.8
1,351,991	-		MPMX20_01291	0.54	-3.3
1,351,998	+		MPMX20_01291	0.55	-1.5
1,352,061	+		MPMX20_01291	0.60	-1.7
1,352,138	+		MPMX20_01291	0.66	+0.9
1,352,214	-		MPMX20_01291	0.73	-2.6
1,352,274	-		MPMX20_01291	0.77	-1.7
1,352,370	+		MPMX20_01291	0.85	-1.9
1,352,372	-		MPMX20_01291	0.86	-0.7
1,352,396	+		MPMX20_01291	0.88	-1.8
1,352,434	-				-0.2
1,352,439	+				+0.1
1,352,468	-				-1.7
1,352,473	-				+0.1
1,352,492	+				-1.9
1,352,494	+				-1.7
1,352,499	+				-0.9
1,352,504	+				-2.0
1,352,552	+				-0.7
1,352,739	+				+0.6
1,352,793	+				-2.7
1,352,826	-		MPMX20_01292	0.13	+0.5
1,352,871	+		MPMX20_01292	0.17	+1.7
1,352,879	-		MPMX20_01292	0.17	-0.6
1,352,885	+		MPMX20_01292	0.18	-1.0
1,352,949	-		MPMX20_01292	0.24	+2.2
1,353,136	+		MPMX20_01292	0.40	-1.1
1,353,144	-		MPMX20_01292	0.41	-2.2
1,353,193	+		MPMX20_01292	0.46	+0.4
1,353,216	-		MPMX20_01292	0.48	-1.9
1,353,216	-		MPMX20_01292	0.48	+1.4
1,353,251	+		MPMX20_01292	0.51	-1.9
1,353,302	-		MPMX20_01292	0.55	-1.8
1,353,306	+		MPMX20_01292	0.56	+0.3
1,353,319	-		MPMX20_01292	0.57	-1.2
1,353,334	-		MPMX20_01292	0.58	+0.7
1,353,342	-		MPMX20_01292	0.59	-0.3
1,353,352	-		MPMX20_01292	0.60	-0.5
1,353,376	+		MPMX20_01292	0.62	+0.7
1,353,438	-		MPMX20_01292	0.68	-2.0
1,353,510	+		MPMX20_01292	0.74	+0.6