Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03581

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
3,770,338	+		MPMX20_03580	0.14	-2.1
3,770,338	+		MPMX20_03580	0.14	+0.4
3,770,346	-		MPMX20_03580	0.15	-0.9
3,770,417	+		MPMX20_03580	0.21	-1.5
3,770,447	-		MPMX20_03580	0.24	-1.2
3,770,546	-		MPMX20_03580	0.34	+0.4
3,770,674	+		MPMX20_03580	0.46	-1.6
3,770,686	+		MPMX20_03580	0.47	-1.2
3,770,686	+		MPMX20_03580	0.47	-1.2
3,770,686	+		MPMX20_03580	0.47	-1.1
3,770,694	-		MPMX20_03580	0.48	+0.9
3,770,694	-		MPMX20_03580	0.48	-3.0
3,770,694	-		MPMX20_03580	0.48	-0.1
3,770,694	-		MPMX20_03580	0.48	-0.1
3,770,694	-		MPMX20_03580	0.48	-2.8
3,770,696	+		MPMX20_03580	0.48	-0.6
3,770,696	+		MPMX20_03580	0.48	-2.0
3,770,828	+		MPMX20_03580	0.60	-1.2
3,770,855	-		MPMX20_03580	0.63	-0.1
3,770,891	+		MPMX20_03580	0.66	-2.1
3,770,896	+		MPMX20_03580	0.67	-2.1
3,770,896	+		MPMX20_03580	0.67	-2.0
3,770,899	+		MPMX20_03580	0.67	-0.1
3,770,899	-		MPMX20_03580	0.67	-0.9
3,770,927	+		MPMX20_03580	0.70	-2.1
3,770,979	+		MPMX20_03580	0.75	-0.9
3,770,979	+		MPMX20_03580	0.75	-0.9
3,770,994	-		MPMX20_03580	0.76	-2.7
3,771,004	+		MPMX20_03580	0.77	-0.6
3,771,150	+				-1.1
3,771,150	+				-0.4
3,771,158	-				+0.9
3,771,158	-				-1.4
3,771,169	+				-0.3
3,771,176	-				-1.9
3,771,200	+				-0.6
3,771,201	+				-1.5
3,771,214	-				+0.6
3,771,288	-				-1.8
3,771,453	-		MPMX20_03581	0.23	-1.2
3,771,458	-		MPMX20_03581	0.24	-1.5
3,771,504	-		MPMX20_03581	0.33	+2.5
3,771,511	-		MPMX20_03581	0.35	+0.2
3,771,614	-		MPMX20_03581	0.55	-0.4
3,771,730	+		MPMX20_03581	0.79	-1.3
3,771,744	+		MPMX20_03581	0.82	-0.8
3,771,744	+		MPMX20_03581	0.82	+0.5
3,771,752	-		MPMX20_03581	0.83	-0.1
3,771,752	-		MPMX20_03581	0.83	-0.7
3,771,752	-		MPMX20_03581	0.83	+1.2
3,771,761	+		MPMX20_03581	0.85	-1.4
3,771,761	+		MPMX20_03581	0.85	-2.2
3,771,761	+		MPMX20_03581	0.85	-2.4
3,771,761	+		MPMX20_03581	0.85	-0.7
3,771,769	-		MPMX20_03581	0.87	+0.0
3,771,789	-				-1.4
3,771,794	+				-1.1
3,771,794	+				+1.3
3,771,795	-				-3.5
3,771,804	+				-0.3
3,771,841	+				-0.6
3,771,849	-				+1.2
3,771,849	-				+1.9
3,771,865	+				+0.5
3,771,870	+				+0.7
3,771,916	-				+0.6
3,771,938	+				+0.1
3,771,995	-				-2.3
3,772,009	+				+0.7
3,772,010	+				-0.1
3,772,010	+				+1.3
3,772,010	+				-1.8
3,772,018	-				-1.2
3,772,021	+				-0.1
3,772,043	-				-0.4
3,772,043	-				+0.8
3,772,069	+		MPMX20_03582	0.12	-2.1
3,772,069	+		MPMX20_03582	0.12	+0.6
3,772,077	-		MPMX20_03582	0.13	-0.6
3,772,167	-		MPMX20_03582	0.23	+0.3
3,772,185	+		MPMX20_03582	0.25	-0.1
3,772,190	+		MPMX20_03582	0.25	-2.2
3,772,193	-		MPMX20_03582	0.26	+1.0
3,772,193	-		MPMX20_03582	0.26	-1.4
3,772,221	+		MPMX20_03582	0.29	-0.1
3,772,221	+		MPMX20_03582	0.29	+1.6
3,772,224	-		MPMX20_03582	0.29	-2.4
3,772,229	-		MPMX20_03582	0.30	+0.4
3,772,229	-		MPMX20_03582	0.30	-1.4
3,772,229	-		MPMX20_03582	0.30	-0.6
3,772,229	-		MPMX20_03582	0.30	+0.6
3,772,274	+		MPMX20_03582	0.35	+1.3
3,772,282	-		MPMX20_03582	0.36	-0.9
3,772,347	-		MPMX20_03582	0.43	-2.1
3,772,349	+		MPMX20_03582	0.44	-0.5
3,772,349	+		MPMX20_03582	0.44	+0.7
3,772,411	+		MPMX20_03582	0.51	-3.0
3,772,411	+		MPMX20_03582	0.51	+0.1
3,772,419	-		MPMX20_03582	0.52	-3.1
3,772,419	-		MPMX20_03582	0.52	-0.3
3,772,419	-		MPMX20_03582	0.52	+3.3
3,772,475	-		MPMX20_03582	0.58	+0.0
3,772,475	-		MPMX20_03582	0.58	+2.3
3,772,475	-		MPMX20_03582	0.58	+0.9
3,772,518	+		MPMX20_03582	0.63	+1.3
3,772,526	-		MPMX20_03582	0.64	-1.1
3,772,553	-		MPMX20_03582	0.67	-1.8
3,772,600	-		MPMX20_03582	0.72	+3.7
3,772,606	+		MPMX20_03582	0.73	+0.9
3,772,627	+		MPMX20_03582	0.75	-1.1
3,772,629	-		MPMX20_03582	0.75	+1.1
3,772,635	-		MPMX20_03582	0.76	-0.5
3,772,640	-		MPMX20_03582	0.77	-0.8
3,772,640	-		MPMX20_03582	0.77	+0.3
3,772,647	+		MPMX20_03582	0.77	+1.5
3,772,657	-		MPMX20_03582	0.79	-1.5
3,772,661	+		MPMX20_03582	0.79	-0.7
3,772,661	+		MPMX20_03582	0.79	+0.1
3,772,661	+		MPMX20_03582	0.79	-0.5
3,772,669	+		MPMX20_03582	0.80	+0.1
3,772,669	-		MPMX20_03582	0.80	-0.5
3,772,669	-		MPMX20_03582	0.80	+0.7
3,772,707	-		MPMX20_03582	0.84	+0.8
3,772,727	+		MPMX20_03582	0.87	+0.8
3,772,727	+		MPMX20_03582	0.87	+0.4
3,772,729	+		MPMX20_03582	0.87	+1.8
3,772,801	+				+0.1
3,772,809	-				-0.1
3,772,809	-				+0.9