Strain Fitness in Erwinia amylovora T8 around OLJFJH_12785
Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-6
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-6 |
|---|---|---|---|---|---|
| remove | |||||
| 2,693,739 | + | OLJFJH_12780 | 0.59 | -0.5 | |
| 2,693,740 | - | OLJFJH_12780 | 0.59 | -0.3 | |
| 2,693,918 | + | OLJFJH_12780 | 0.68 | +1.5 | |
| 2,693,947 | - | OLJFJH_12780 | 0.69 | +2.2 | |
| 2,694,124 | - | OLJFJH_12780 | 0.78 | +0.4 | |
| 2,694,124 | - | OLJFJH_12780 | 0.78 | -0.8 | |
| 2,694,128 | + | OLJFJH_12780 | 0.78 | +0.4 | |
| 2,694,128 | + | OLJFJH_12780 | 0.78 | -0.6 | |
| 2,694,128 | + | OLJFJH_12780 | 0.78 | -0.8 | |
| 2,694,129 | - | OLJFJH_12780 | 0.78 | +0.1 | |
| 2,694,169 | - | OLJFJH_12780 | 0.80 | +0.0 | |
| 2,694,767 | + | OLJFJH_12785 | 0.46 | +2.7 | |
| 2,694,866 | - | OLJFJH_12785 | 0.71 | +0.6 | |
| 2,694,893 | - | OLJFJH_12785 | 0.78 | -1.0 | |
| 2,694,972 | + | -1.5 | |||
| 2,694,972 | + | -0.1 | |||
| 2,694,973 | - | -0.1 |
Or see this region's nucleotide sequence