Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt dctM and DVU0706 overlap by 4 nucleotides DVU0706 and dctP are separated by 84 nucleotides dctP and DVU0710 are separated by 982 nucleotides
DVU0705: dctM - TRAP dicarboxylate transporter, putative (TIGR), at 785,091 to 786,374
dctM
DVU0706: DVU0706 - membrane protein, putative (TIGR), at 786,371 to 786,841
DVU0706
DVU0707: dctP - TRAP dicarboxylate family transporter (TIGR), at 786,926 to 787,942
dctP
DVU0710: DVU0710 - competence protein comM, putative (TIGR), at 788,925 to 790,589
DVU0710
Position (kb) 786
787
788 Strain fitness (log2 ratio) -2
-1
0
1
2 at 785.980 kb on + strand, within dctM at 786.081 kb on + strand, within dctM at 786.107 kb on - strand, within dctM at 786.135 kb on + strand, within dctM at 786.171 kb on + strand, within dctM at 786.171 kb on + strand, within dctM at 786.318 kb on - strand at 786.336 kb on - strand at 786.378 kb on - strand at 786.398 kb on + strand at 786.406 kb on - strand at 786.450 kb on + strand, within DVU0706 at 786.566 kb on - strand, within DVU0706 at 786.733 kb on - strand, within DVU0706 at 786.780 kb on + strand, within DVU0706 at 786.780 kb on + strand, within DVU0706 at 786.788 kb on - strand, within DVU0706 at 786.788 kb on - strand, within DVU0706 at 786.972 kb on + strand at 787.026 kb on + strand at 787.034 kb on - strand, within dctP at 787.049 kb on - strand, within dctP at 787.099 kb on + strand, within dctP at 787.205 kb on - strand, within dctP at 787.212 kb on - strand, within dctP at 787.226 kb on - strand, within dctP at 787.226 kb on - strand, within dctP at 787.244 kb on + strand, within dctP at 787.285 kb on - strand, within dctP at 787.310 kb on - strand, within dctP at 787.310 kb on - strand, within dctP at 787.509 kb on + strand, within dctP at 787.548 kb on + strand, within dctP at 787.575 kb on + strand, within dctP at 787.600 kb on - strand, within dctP at 787.690 kb on - strand, within dctP at 787.690 kb on - strand, within dctP at 787.713 kb on + strand, within dctP at 787.790 kb on + strand, within dctP at 787.836 kb on + strand, within dctP at 787.874 kb on - strand at 787.879 kb on - strand at 788.023 kb on - strand at 788.030 kb on + strand at 788.120 kb on + strand at 788.161 kb on - strand at 788.422 kb on + strand at 788.468 kb on - strand at 788.523 kb on - strand at 788.532 kb on - strand at 788.614 kb on + strand at 788.622 kb on - strand at 788.662 kb on - strand at 788.701 kb on + strand at 788.745 kb on + strand at 788.745 kb on + strand at 788.753 kb on - strand at 788.766 kb on + strand at 788.774 kb on - strand at 788.805 kb on + strand at 788.906 kb on + strand at 788.939 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 785,980 + dctM DVU0705 0.69 -0.2 786,081 + dctM DVU0705 0.77 -1.9 786,107 - dctM DVU0705 0.79 -0.7 786,135 + dctM DVU0705 0.81 -1.7 786,171 + dctM DVU0705 0.84 -0.4 786,171 + dctM DVU0705 0.84 -0.3 786,318 - -0.3 786,336 - -0.7 786,378 - -0.6 786,398 + -0.1 786,406 - -0.7 786,450 + DVU0706 0.17 -0.5 786,566 - DVU0706 0.41 +0.2 786,733 - DVU0706 0.77 -0.1 786,780 + DVU0706 0.87 -0.1 786,780 + DVU0706 0.87 +0.3 786,788 - DVU0706 0.89 -0.3 786,788 - DVU0706 0.89 -0.2 786,972 + -0.9 787,026 + -0.6 787,034 - dctP DVU0707 0.11 +1.6 787,049 - dctP DVU0707 0.12 -0.0 787,099 + dctP DVU0707 0.17 -0.3 787,205 - dctP DVU0707 0.27 +0.4 787,212 - dctP DVU0707 0.28 +0.1 787,226 - dctP DVU0707 0.29 +0.8 787,226 - dctP DVU0707 0.29 +0.1 787,244 + dctP DVU0707 0.31 +0.7 787,285 - dctP DVU0707 0.35 +1.1 787,310 - dctP DVU0707 0.38 +0.1 787,310 - dctP DVU0707 0.38 -1.0 787,509 + dctP DVU0707 0.57 +0.3 787,548 + dctP DVU0707 0.61 -0.6 787,575 + dctP DVU0707 0.64 +0.1 787,600 - dctP DVU0707 0.66 +0.1 787,690 - dctP DVU0707 0.75 +2.3 787,690 - dctP DVU0707 0.75 +0.2 787,713 + dctP DVU0707 0.77 +0.1 787,790 + dctP DVU0707 0.85 +0.2 787,836 + dctP DVU0707 0.89 -1.7 787,874 - -0.6 787,879 - -0.3 788,023 - -0.7 788,030 + +0.1 788,120 + +0.5 788,161 - +2.0 788,422 + +0.0 788,468 - -0.3 788,523 - -0.5 788,532 - -1.5 788,614 + -0.3 788,622 - -0.7 788,662 - +0.2 788,701 + -0.1 788,745 + -0.9 788,745 + -1.4 788,753 - -0.2 788,766 + +0.3 788,774 - -1.3 788,805 + +0.5 788,906 + +0.1 788,939 + -1.1
Or see this region's nucleotide sequence