Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02385

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
2,507,197	+				-0.7
2,507,197	+				-1.2
2,507,197	+				+0.4
2,507,197	+				+0.5
2,507,198	-				-1.3
2,507,271	+				+0.6
2,507,271	+				-1.2
2,507,271	+				-1.9
2,507,271	+				-0.2
2,507,271	+				+0.2
2,507,271	+				+0.8
2,507,271	+				-1.2
2,507,271	+				-0.7
2,507,271	+				+0.8
2,507,271	+				-0.8
2,507,271	+				-0.2
2,507,271	+				-1.5
2,507,271	+				+1.4
2,507,271	+				-0.8
2,507,271	+				-0.1
2,507,271	+				-0.2
2,507,271	+				-2.0
2,507,271	+				-0.5
2,507,271	+				+0.2
2,507,271	+				-0.9
2,507,271	+				-0.1
2,507,272	-				-1.8
2,507,272	-				-2.2
2,507,272	-				-0.8
2,507,272	-				+1.6
2,507,286	+				+0.5
2,507,286	+				+0.0
2,507,286	+				+0.4
2,507,286	+				-0.6
2,507,286	+				-0.2
2,507,286	+				+1.3
2,507,286	+				-0.5
2,507,287	-				+0.2
2,507,287	-				-2.4
2,507,359	+		MPMX19_02383	0.18	+0.2
2,507,359	+		MPMX19_02383	0.18	-0.5
2,507,360	-		MPMX19_02383	0.18	-0.2
2,507,618	+				+0.0
2,507,618	+				-2.8
2,507,629	+				+0.0
2,507,630	-				-2.2
2,507,630	-				-0.4
2,507,630	-				+0.2
2,507,648	+				+0.8
2,507,649	-				-1.7
2,507,728	-		MPMX19_02384	0.19	-1.2
2,507,779	+		MPMX19_02384	0.31	-0.2
2,507,779	+		MPMX19_02384	0.31	-0.8
2,507,779	+		MPMX19_02384	0.31	-0.6
2,507,779	+		MPMX19_02384	0.31	-0.4
2,507,779	+		MPMX19_02384	0.31	+0.2
2,507,779	+		MPMX19_02384	0.31	+0.2
2,507,779	+		MPMX19_02384	0.31	+1.8
2,507,779	+		MPMX19_02384	0.31	+2.4
2,507,779	+		MPMX19_02384	0.31	-0.2
2,507,779	+		MPMX19_02384	0.31	-1.5
2,507,780	-		MPMX19_02384	0.32	+0.8
2,507,780	-		MPMX19_02384	0.32	+0.2
2,507,780	-		MPMX19_02384	0.32	+0.2
2,507,780	-		MPMX19_02384	0.32	+0.8
2,507,780	-		MPMX19_02384	0.32	-0.5
2,507,780	-		MPMX19_02384	0.32	-0.4
2,507,780	-		MPMX19_02384	0.32	-0.8
2,507,780	-		MPMX19_02384	0.32	+0.0
2,507,780	-		MPMX19_02384	0.32	-0.4
2,507,780	-		MPMX19_02384	0.32	-0.5
2,507,780	-		MPMX19_02384	0.32	-0.2
2,507,893	+		MPMX19_02384	0.60	+0.2
2,507,893	+		MPMX19_02384	0.60	-0.1
2,507,893	+		MPMX19_02384	0.60	+2.4
2,507,893	+		MPMX19_02384	0.60	-1.2
2,507,893	+		MPMX19_02384	0.60	-1.0
2,507,893	+		MPMX19_02384	0.60	+0.5
2,507,893	+		MPMX19_02384	0.60	-0.2
2,507,893	+		MPMX19_02384	0.60	+1.1
2,507,894	-		MPMX19_02384	0.60	-0.2
2,507,894	-		MPMX19_02384	0.60	-1.7
2,507,894	-		MPMX19_02384	0.60	+0.0
2,507,894	-		MPMX19_02384	0.60	-0.2
2,507,894	-		MPMX19_02384	0.60	+0.2
2,507,894	-		MPMX19_02384	0.60	-1.6
2,507,894	-		MPMX19_02384	0.60	+1.2
2,508,081	+				-0.8
2,508,082	-				-0.5
2,508,082	-				-0.2
2,508,282	+		MPMX19_02385	0.13	+0.3
2,508,282	+		MPMX19_02385	0.13	-0.2
2,508,282	+		MPMX19_02385	0.13	-2.0
2,508,282	+		MPMX19_02385	0.13	-1.8
2,508,282	+		MPMX19_02385	0.13	+0.8
2,508,282	+		MPMX19_02385	0.13	-1.2
2,508,282	+		MPMX19_02385	0.13	+0.5
2,508,282	+		MPMX19_02385	0.13	+1.1
2,508,282	+		MPMX19_02385	0.13	-0.4
2,508,282	+		MPMX19_02385	0.13	+0.6
2,508,282	+		MPMX19_02385	0.13	-0.3
2,508,282	+		MPMX19_02385	0.13	-1.0
2,508,282	+		MPMX19_02385	0.13	-0.6
2,508,282	+		MPMX19_02385	0.13	+1.4
2,508,282	+		MPMX19_02385	0.13	+0.8
2,508,283	-		MPMX19_02385	0.13	+1.0
2,508,283	-		MPMX19_02385	0.13	-1.2
2,508,283	-		MPMX19_02385	0.13	+0.4
2,508,283	-		MPMX19_02385	0.13	+0.8
2,508,283	-		MPMX19_02385	0.13	+0.4
2,508,283	-		MPMX19_02385	0.13	+0.3
2,508,283	-		MPMX19_02385	0.13	+0.3
2,508,283	-		MPMX19_02385	0.13	-1.1
2,508,283	-		MPMX19_02385	0.13	-0.2
2,508,283	-		MPMX19_02385	0.13	+0.4
2,508,283	-		MPMX19_02385	0.13	-0.2
2,508,408	+		MPMX19_02385	0.26	+0.8
2,508,408	+		MPMX19_02385	0.26	-1.0
2,508,408	+		MPMX19_02385	0.26	-0.8
2,508,408	+		MPMX19_02385	0.26	+0.8
2,508,408	+		MPMX19_02385	0.26	+0.5
2,508,408	+		MPMX19_02385	0.26	-0.5
2,508,408	+		MPMX19_02385	0.26	+0.8
2,508,408	+		MPMX19_02385	0.26	-0.8
2,508,408	+		MPMX19_02385	0.26	-0.8
2,508,408	+		MPMX19_02385	0.26	-0.1
2,508,408	+		MPMX19_02385	0.26	-0.0
2,508,408	+		MPMX19_02385	0.26	+0.1
2,508,408	+		MPMX19_02385	0.26	+0.3
2,508,408	+		MPMX19_02385	0.26	-0.1
2,508,409	-		MPMX19_02385	0.26	+2.2
2,508,409	-		MPMX19_02385	0.26	+0.8
2,508,409	-		MPMX19_02385	0.26	+0.0
2,508,409	-		MPMX19_02385	0.26	+0.5
2,508,409	-		MPMX19_02385	0.26	-0.2
2,508,513	+		MPMX19_02385	0.37	-0.8
2,508,513	+		MPMX19_02385	0.37	+0.4
2,508,513	+		MPMX19_02385	0.37	-0.2
2,508,513	+		MPMX19_02385	0.37	-0.6
2,508,513	+		MPMX19_02385	0.37	-1.5
2,508,513	+		MPMX19_02385	0.37	-0.2
2,508,513	+		MPMX19_02385	0.37	+0.2
2,508,513	+		MPMX19_02385	0.37	+1.0
2,508,513	+		MPMX19_02385	0.37	-1.2
2,508,513	+		MPMX19_02385	0.37	-0.2
2,508,514	-		MPMX19_02385	0.37	-1.0
2,508,514	-		MPMX19_02385	0.37	+1.4
2,508,514	-		MPMX19_02385	0.37	-0.5
2,508,514	-		MPMX19_02385	0.37	-0.5
2,508,547	+		MPMX19_02385	0.41	-0.7
2,508,547	+		MPMX19_02385	0.41	-2.0
2,508,547	+		MPMX19_02385	0.41	-0.8
2,508,547	+		MPMX19_02385	0.41	+0.8
2,508,547	+		MPMX19_02385	0.41	-0.2
2,508,547	+		MPMX19_02385	0.41	+0.2
2,508,547	+		MPMX19_02385	0.41	-0.5
2,508,547	+		MPMX19_02385	0.41	+1.2
2,508,548	-		MPMX19_02385	0.41	-0.4
2,508,548	-		MPMX19_02385	0.41	-0.4
2,508,548	-		MPMX19_02385	0.41	+0.1
2,509,011	+		MPMX19_02385	0.89	-0.4
2,509,011	+		MPMX19_02385	0.89	-0.5
2,509,011	+		MPMX19_02385	0.89	-0.5
2,509,011	+		MPMX19_02385	0.89	-0.4
2,509,011	+		MPMX19_02385	0.89	+0.3
2,509,012	-		MPMX19_02385	0.89	-2.5
2,509,012	-		MPMX19_02385	0.89	+2.8
2,509,012	-		MPMX19_02385	0.89	+2.1
2,509,203	+				-0.7
2,509,203	+				-1.2
2,509,203	+				-2.9
2,509,203	+				-0.4
2,509,203	+				+1.5
2,509,203	+				-1.2
2,509,204	-				-0.2
2,509,204	-				-0.9
2,509,204	-				-0.6
2,509,204	-				+0.4
2,509,204	-				-0.9
2,509,204	-				-1.1
2,509,204	-				-1.5
2,509,216	-				-0.4
2,509,224	+				+0.4
2,509,224	+				-0.8
2,509,224	+				+0.1
2,509,224	+				-1.4
2,509,224	+				+0.8
2,509,224	+				+0.0
2,509,224	+				+0.1
2,509,224	+				+0.2
2,509,224	+				+1.1
2,509,224	+				+0.2
2,509,224	+				-2.5
2,509,224	+				-0.6
2,509,225	-				-0.2
2,509,225	-				+0.0
2,509,225	-				-1.0
2,509,225	-				+1.3
2,509,225	-				-1.3
2,509,225	-				-0.2
2,509,225	-				-1.2
2,509,225	-				-0.5
2,509,251	+				+1.1
2,509,251	+				+0.3
2,509,251	+				-0.4
2,509,251	+				-0.1
2,509,251	+				+0.4
2,509,252	-				-1.4
2,509,252	-				-0.3
2,509,254	+				+0.1
2,509,254	+				-1.2
2,509,254	+				+0.8
2,509,254	+				+1.1
2,509,255	-				-0.0
2,509,255	-				+0.4
2,509,255	-				-2.0
2,509,289	+				+0.0
2,509,289	+				+0.4
2,509,289	+				-1.3
2,509,290	-				-1.4
2,509,290	-				-0.2
2,509,511	-		MPMX19_02386	0.10	-0.7
2,509,511	-		MPMX19_02386	0.10	-0.8
2,509,604	+		MPMX19_02386	0.16	+0.4
2,509,604	+		MPMX19_02386	0.16	-0.5
2,509,604	+		MPMX19_02386	0.16	-1.8
2,509,604	+		MPMX19_02386	0.16	-0.5
2,509,605	-		MPMX19_02386	0.16	+3.4
2,509,605	-		MPMX19_02386	0.16	+0.4
2,509,605	-		MPMX19_02386	0.16	-0.2
2,509,605	-		MPMX19_02386	0.16	-1.2
2,509,605	-		MPMX19_02386	0.16	+0.4
2,509,605	-		MPMX19_02386	0.16	-0.9
2,509,605	-		MPMX19_02386	0.16	-1.8
2,509,605	-		MPMX19_02386	0.16	+0.8
2,509,605	-		MPMX19_02386	0.16	-0.8
2,509,772	+		MPMX19_02386	0.25	-0.9
2,509,772	+		MPMX19_02386	0.25	+1.3
2,509,772	+		MPMX19_02386	0.25	-1.2
2,509,773	-		MPMX19_02386	0.25	-1.2
2,509,773	-		MPMX19_02386	0.25	-0.8
2,509,773	-		MPMX19_02386	0.25	+0.8
2,509,970	+		MPMX19_02386	0.36	-1.2
2,509,970	+		MPMX19_02386	0.36	-0.6
2,509,970	+		MPMX19_02386	0.36	+1.4
2,509,970	+		MPMX19_02386	0.36	-0.2
2,509,970	+		MPMX19_02386	0.36	+1.1
2,509,970	+		MPMX19_02386	0.36	+0.8
2,509,970	+		MPMX19_02386	0.36	+0.8
2,509,970	+		MPMX19_02386	0.36	+2.2
2,509,970	+		MPMX19_02386	0.36	+0.1
2,509,971	-		MPMX19_02386	0.36	-0.4
2,509,971	-		MPMX19_02386	0.36	+0.6
2,509,971	-		MPMX19_02386	0.36	+1.0
2,509,971	-		MPMX19_02386	0.36	+0.8
2,509,971	-		MPMX19_02386	0.36	-2.8
2,509,971	-		MPMX19_02386	0.36	+0.2
2,509,971	-		MPMX19_02386	0.36	-1.5
2,509,971	-		MPMX19_02386	0.36	-0.2
2,509,971	-		MPMX19_02386	0.36	-0.8
2,509,985	+		MPMX19_02386	0.37	+2.0
2,509,985	+		MPMX19_02386	0.37	-1.8
2,509,985	+		MPMX19_02386	0.37	+0.8
2,509,985	+		MPMX19_02386	0.37	-0.1
2,509,985	+		MPMX19_02386	0.37	-0.2
2,509,985	+		MPMX19_02386	0.37	-0.8
2,509,985	+		MPMX19_02386	0.37	+0.0
2,509,985	+		MPMX19_02386	0.37	+0.0
2,509,985	+		MPMX19_02386	0.37	+0.8
2,509,985	+		MPMX19_02386	0.37	+1.8
2,509,986	-		MPMX19_02386	0.37	+0.8
2,509,986	-		MPMX19_02386	0.37	-0.8
2,509,986	-		MPMX19_02386	0.37	-0.0
2,509,986	-		MPMX19_02386	0.37	+0.0
2,509,986	-		MPMX19_02386	0.37	-0.0
2,509,986	-		MPMX19_02386	0.37	-1.5
2,509,986	-		MPMX19_02386	0.37	+0.5
2,509,986	-		MPMX19_02386	0.37	+1.2
2,509,986	-		MPMX19_02386	0.37	+0.8
2,509,986	-		MPMX19_02386	0.37	-0.1
2,510,099	-		MPMX19_02386	0.43	+0.8