Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00633

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00632 and MPMX26_00633 are separated by 189 nucleotidesMPMX26_00633 and MPMX26_00634 are separated by 151 nucleotides MPMX26_00632: MPMX26_00632 - Acyl-CoA dehydrogenase, short-chain specific, at 673,786 to 674,958 _00632 MPMX26_00633: MPMX26_00633 - HTH-type transcriptional regulator BetI, at 675,148 to 675,744 _00633 MPMX26_00634: MPMX26_00634 - 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase, at 675,896 to 677,581 _00634 Position (kb) 675 676Strain fitness (log2 ratio) -1 0 1 2at 674.211 kb on - strand, within MPMX26_00632at 674.845 kb on - strandat 674.913 kb on - strandat 675.130 kb on + strandat 675.135 kb on + strandat 675.146 kb on + strandat 675.151 kb on + strandat 675.151 kb on + strandat 675.151 kb on + strandat 675.151 kb on + strandat 675.151 kb on + strandat 675.151 kb on + strandat 675.151 kb on + strandat 675.177 kb on + strandat 675.177 kb on + strandat 675.177 kb on + strandat 675.177 kb on + strandat 675.177 kb on + strandat 675.182 kb on + strandat 675.222 kb on + strand, within MPMX26_00633at 675.222 kb on + strand, within MPMX26_00633at 675.222 kb on + strand, within MPMX26_00633at 675.222 kb on + strand, within MPMX26_00633at 675.222 kb on + strand, within MPMX26_00633at 675.222 kb on + strand, within MPMX26_00633at 675.250 kb on + strand, within MPMX26_00633at 675.264 kb on + strand, within MPMX26_00633at 675.264 kb on + strand, within MPMX26_00633at 675.264 kb on + strand, within MPMX26_00633at 675.264 kb on + strand, within MPMX26_00633at 675.264 kb on + strand, within MPMX26_00633at 675.264 kb on + strand, within MPMX26_00633at 675.264 kb on + strand, within MPMX26_00633at 675.387 kb on + strand, within MPMX26_00633at 675.397 kb on + strand, within MPMX26_00633at 675.397 kb on + strand, within MPMX26_00633at 675.397 kb on + strand, within MPMX26_00633at 675.397 kb on + strand, within MPMX26_00633at 675.433 kb on + strand, within MPMX26_00633at 675.433 kb on + strand, within MPMX26_00633at 675.448 kb on + strand, within MPMX26_00633at 675.465 kb on + strand, within MPMX26_00633at 675.490 kb on + strand, within MPMX26_00633at 675.494 kb on + strand, within MPMX26_00633at 675.541 kb on + strand, within MPMX26_00633at 675.541 kb on + strand, within MPMX26_00633at 675.541 kb on + strand, within MPMX26_00633at 675.573 kb on + strand, within MPMX26_00633at 675.576 kb on + strand, within MPMX26_00633at 675.586 kb on + strand, within MPMX26_00633at 675.586 kb on + strand, within MPMX26_00633at 675.591 kb on + strand, within MPMX26_00633at 675.591 kb on + strand, within MPMX26_00633at 675.591 kb on + strand, within MPMX26_00633at 675.591 kb on + strand, within MPMX26_00633at 675.591 kb on + strand, within MPMX26_00633at 675.661 kb on + strand, within MPMX26_00633at 675.685 kb on + strandat 675.699 kb on + strandat 676.460 kb on - strand, within MPMX26_00634

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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674,211 - MPMX26_00632 0.36 +2.5
674,845 - -0.7
674,913 - +1.5
675,130 + +0.2
675,135 + -0.0
675,146 + +0.4
675,151 + +0.3
675,151 + -0.1
675,151 + -0.6
675,151 + +0.1
675,151 + +0.8
675,151 + -0.1
675,151 + +0.0
675,177 + +0.6
675,177 + +0.2
675,177 + +0.4
675,177 + -0.7
675,177 + -1.0
675,182 + +0.6
675,222 + MPMX26_00633 0.12 +0.3
675,222 + MPMX26_00633 0.12 -0.2
675,222 + MPMX26_00633 0.12 -1.5
675,222 + MPMX26_00633 0.12 +0.3
675,222 + MPMX26_00633 0.12 -0.8
675,222 + MPMX26_00633 0.12 +0.5
675,250 + MPMX26_00633 0.17 -0.8
675,264 + MPMX26_00633 0.19 +0.1
675,264 + MPMX26_00633 0.19 +0.1
675,264 + MPMX26_00633 0.19 -0.1
675,264 + MPMX26_00633 0.19 +0.4
675,264 + MPMX26_00633 0.19 -1.4
675,264 + MPMX26_00633 0.19 -0.1
675,264 + MPMX26_00633 0.19 +0.1
675,387 + MPMX26_00633 0.40 -0.3
675,397 + MPMX26_00633 0.42 +0.1
675,397 + MPMX26_00633 0.42 -1.4
675,397 + MPMX26_00633 0.42 +0.0
675,397 + MPMX26_00633 0.42 -0.3
675,433 + MPMX26_00633 0.48 +0.2
675,433 + MPMX26_00633 0.48 -0.3
675,448 + MPMX26_00633 0.50 -0.2
675,465 + MPMX26_00633 0.53 +0.6
675,490 + MPMX26_00633 0.57 +0.2
675,494 + MPMX26_00633 0.58 -0.7
675,541 + MPMX26_00633 0.66 -0.9
675,541 + MPMX26_00633 0.66 +0.6
675,541 + MPMX26_00633 0.66 +0.7
675,573 + MPMX26_00633 0.71 -0.3
675,576 + MPMX26_00633 0.72 -0.4
675,586 + MPMX26_00633 0.73 +0.2
675,586 + MPMX26_00633 0.73 +0.2
675,591 + MPMX26_00633 0.74 +0.2
675,591 + MPMX26_00633 0.74 +0.2
675,591 + MPMX26_00633 0.74 -0.4
675,591 + MPMX26_00633 0.74 -1.4
675,591 + MPMX26_00633 0.74 -0.9
675,661 + MPMX26_00633 0.86 -0.2
675,685 + -0.1
675,699 + -0.4
676,460 - MPMX26_00634 0.33 +2.2

Or see this region's nucleotide sequence