Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_05655 and OLJFJH_05660 are separated by 243 nucleotides OLJFJH_05660 and OLJFJH_05665 are separated by 3 nucleotides OLJFJH_05665 and OLJFJH_05670 are separated by 59 nucleotides OLJFJH_05670 and OLJFJH_05675 are separated by 191 nucleotides
OLJFJH_05655: OLJFJH_05655 - relaxase/mobilization nuclease domain-containing protein, at 1,150,577 to 1,151,707
_05655
OLJFJH_05660: OLJFJH_05660 - DUF4755 domain-containing protein, at 1,151,951 to 1,152,535
_05660
OLJFJH_05665: OLJFJH_05665 - hypothetical protein, at 1,152,539 to 1,152,919
_05665
OLJFJH_05670: OLJFJH_05670 - hypothetical protein, at 1,152,979 to 1,153,716
_05670
OLJFJH_05675: OLJFJH_05675 - hypothetical protein, at 1,153,908 to 1,154,327
_05675
Position (kb) 1152
1153 Strain fitness (log2 ratio) -1
0
1
2 at 1151.982 kb on - strand at 1152.027 kb on + strand, within OLJFJH_05660 at 1152.115 kb on + strand, within OLJFJH_05660 at 1152.116 kb on - strand, within OLJFJH_05660 at 1152.119 kb on - strand, within OLJFJH_05660 at 1152.149 kb on - strand, within OLJFJH_05660 at 1152.239 kb on - strand, within OLJFJH_05660 at 1152.424 kb on + strand, within OLJFJH_05660 at 1152.571 kb on + strand at 1152.619 kb on + strand, within OLJFJH_05665 at 1152.713 kb on - strand, within OLJFJH_05665 at 1152.713 kb on - strand, within OLJFJH_05665 at 1152.847 kb on + strand, within OLJFJH_05665 at 1152.903 kb on + strand at 1152.903 kb on + strand at 1153.262 kb on + strand, within OLJFJH_05670 at 1153.304 kb on + strand, within OLJFJH_05670 at 1153.468 kb on + strand, within OLJFJH_05670 at 1153.688 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:28;Samp:16-3 remove 1,151,982 - -1.2 1,152,027 + OLJFJH_05660 0.13 +0.2 1,152,115 + OLJFJH_05660 0.28 +0.4 1,152,116 - OLJFJH_05660 0.28 +0.7 1,152,119 - OLJFJH_05660 0.29 -0.7 1,152,149 - OLJFJH_05660 0.34 +2.1 1,152,239 - OLJFJH_05660 0.49 +0.9 1,152,424 + OLJFJH_05660 0.81 -0.9 1,152,571 + +1.3 1,152,619 + OLJFJH_05665 0.21 +1.0 1,152,713 - OLJFJH_05665 0.46 -1.4 1,152,713 - OLJFJH_05665 0.46 -0.6 1,152,847 + OLJFJH_05665 0.81 -0.9 1,152,903 + -1.0 1,152,903 + -1.0 1,153,262 + OLJFJH_05670 0.38 +0.3 1,153,304 + OLJFJH_05670 0.44 -0.7 1,153,468 + OLJFJH_05670 0.66 +2.0 1,153,688 - -0.6
Or see this region's nucleotide sequence