Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02806

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02804 and MPMX26_02805 are separated by 21 nucleotidesMPMX26_02805 and MPMX26_02806 are separated by 220 nucleotidesMPMX26_02806 and MPMX26_02807 are separated by 372 nucleotides MPMX26_02804: MPMX26_02804 - hypothetical protein, at 2,886,049 to 2,887,113 _02804 MPMX26_02805: MPMX26_02805 - Protein LemA, at 2,887,135 to 2,887,725 _02805 MPMX26_02806: MPMX26_02806 - hypothetical protein, at 2,887,946 to 2,888,809 _02806 MPMX26_02807: MPMX26_02807 - Glutamate synthase [NADPH] small chain, at 2,889,182 to 2,890,603 _02807 Position (kb) 2887 2888 2889Strain fitness (log2 ratio) -2 -1 0 1 2at 2886.949 kb on - strand, within MPMX26_02804at 2886.959 kb on - strand, within MPMX26_02804at 2886.989 kb on - strand, within MPMX26_02804at 2886.995 kb on - strand, within MPMX26_02804at 2887.028 kb on - strandat 2887.031 kb on - strandat 2887.031 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.049 kb on - strandat 2887.054 kb on - strandat 2887.054 kb on - strandat 2887.095 kb on - strandat 2887.152 kb on - strandat 2887.172 kb on - strandat 2887.179 kb on - strandat 2887.220 kb on - strand, within MPMX26_02805at 2887.228 kb on - strand, within MPMX26_02805at 2887.228 kb on - strand, within MPMX26_02805at 2887.228 kb on - strand, within MPMX26_02805at 2887.228 kb on - strand, within MPMX26_02805at 2887.228 kb on - strand, within MPMX26_02805at 2887.259 kb on - strand, within MPMX26_02805at 2887.266 kb on - strand, within MPMX26_02805at 2887.268 kb on - strand, within MPMX26_02805at 2887.276 kb on - strand, within MPMX26_02805at 2887.290 kb on - strand, within MPMX26_02805at 2887.311 kb on - strand, within MPMX26_02805at 2887.311 kb on - strand, within MPMX26_02805at 2887.321 kb on - strand, within MPMX26_02805at 2887.321 kb on - strand, within MPMX26_02805at 2887.327 kb on - strand, within MPMX26_02805at 2887.327 kb on - strand, within MPMX26_02805at 2887.367 kb on - strand, within MPMX26_02805at 2887.372 kb on - strand, within MPMX26_02805at 2887.512 kb on - strand, within MPMX26_02805at 2887.512 kb on - strand, within MPMX26_02805at 2887.551 kb on - strand, within MPMX26_02805at 2887.551 kb on - strand, within MPMX26_02805at 2887.551 kb on - strand, within MPMX26_02805at 2887.583 kb on - strand, within MPMX26_02805at 2887.588 kb on - strand, within MPMX26_02805at 2887.613 kb on - strand, within MPMX26_02805at 2887.636 kb on - strand, within MPMX26_02805at 2887.642 kb on - strand, within MPMX26_02805at 2887.642 kb on - strand, within MPMX26_02805at 2887.652 kb on - strand, within MPMX26_02805at 2887.661 kb on - strand, within MPMX26_02805at 2887.680 kb on - strandat 2887.687 kb on - strandat 2887.692 kb on - strandat 2887.693 kb on - strandat 2887.706 kb on - strandat 2888.177 kb on - strand, within MPMX26_02806at 2888.249 kb on - strand, within MPMX26_02806at 2888.659 kb on - strand, within MPMX26_02806at 2889.187 kb on + strandat 2889.195 kb on - strandat 2889.195 kb on - strandat 2889.195 kb on - strandat 2889.205 kb on - strandat 2889.205 kb on - strandat 2889.214 kb on - strandat 2889.248 kb on - strandat 2889.258 kb on - strandat 2889.258 kb on - strandat 2889.273 kb on - strandat 2889.273 kb on - strandat 2889.330 kb on - strand, within MPMX26_02807at 2889.342 kb on - strand, within MPMX26_02807at 2889.349 kb on - strand, within MPMX26_02807at 2889.349 kb on - strand, within MPMX26_02807at 2889.353 kb on - strand, within MPMX26_02807at 2889.353 kb on - strand, within MPMX26_02807at 2889.353 kb on - strand, within MPMX26_02807at 2889.363 kb on - strand, within MPMX26_02807at 2889.378 kb on - strand, within MPMX26_02807at 2889.378 kb on - strand, within MPMX26_02807at 2889.378 kb on - strand, within MPMX26_02807at 2889.378 kb on - strand, within MPMX26_02807at 2889.378 kb on - strand, within MPMX26_02807at 2889.426 kb on - strand, within MPMX26_02807at 2889.447 kb on - strand, within MPMX26_02807at 2889.447 kb on - strand, within MPMX26_02807at 2889.447 kb on - strand, within MPMX26_02807at 2889.455 kb on - strand, within MPMX26_02807at 2889.464 kb on - strand, within MPMX26_02807at 2889.465 kb on - strand, within MPMX26_02807at 2889.470 kb on - strand, within MPMX26_02807at 2889.470 kb on - strand, within MPMX26_02807at 2889.470 kb on - strand, within MPMX26_02807at 2889.470 kb on - strand, within MPMX26_02807at 2889.488 kb on - strand, within MPMX26_02807at 2889.494 kb on - strand, within MPMX26_02807at 2889.494 kb on - strand, within MPMX26_02807at 2889.494 kb on - strand, within MPMX26_02807at 2889.502 kb on - strand, within MPMX26_02807at 2889.504 kb on - strand, within MPMX26_02807at 2889.504 kb on - strand, within MPMX26_02807at 2889.511 kb on + strand, within MPMX26_02807at 2889.519 kb on - strand, within MPMX26_02807at 2889.527 kb on - strand, within MPMX26_02807at 2889.527 kb on - strand, within MPMX26_02807at 2889.527 kb on - strand, within MPMX26_02807at 2889.527 kb on - strand, within MPMX26_02807at 2889.575 kb on - strand, within MPMX26_02807at 2889.583 kb on - strand, within MPMX26_02807at 2889.619 kb on - strand, within MPMX26_02807at 2889.626 kb on - strand, within MPMX26_02807at 2889.651 kb on - strand, within MPMX26_02807at 2889.661 kb on - strand, within MPMX26_02807at 2889.661 kb on - strand, within MPMX26_02807at 2889.661 kb on - strand, within MPMX26_02807at 2889.661 kb on - strand, within MPMX26_02807at 2889.661 kb on - strand, within MPMX26_02807at 2889.661 kb on - strand, within MPMX26_02807at 2889.666 kb on - strand, within MPMX26_02807at 2889.666 kb on - strand, within MPMX26_02807at 2889.685 kb on - strand, within MPMX26_02807at 2889.695 kb on - strand, within MPMX26_02807at 2889.695 kb on - strand, within MPMX26_02807at 2889.695 kb on - strand, within MPMX26_02807at 2889.695 kb on - strand, within MPMX26_02807at 2889.697 kb on - strand, within MPMX26_02807at 2889.703 kb on - strand, within MPMX26_02807at 2889.703 kb on - strand, within MPMX26_02807at 2889.703 kb on - strand, within MPMX26_02807at 2889.703 kb on - strand, within MPMX26_02807at 2889.705 kb on - strand, within MPMX26_02807at 2889.713 kb on - strand, within MPMX26_02807at 2889.719 kb on - strand, within MPMX26_02807at 2889.724 kb on - strand, within MPMX26_02807at 2889.752 kb on - strand, within MPMX26_02807at 2889.757 kb on - strand, within MPMX26_02807at 2889.795 kb on - strand, within MPMX26_02807at 2889.795 kb on - strand, within MPMX26_02807

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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2,886,949 - MPMX26_02804 0.85 -0.6
2,886,959 - MPMX26_02804 0.85 +0.4
2,886,989 - MPMX26_02804 0.88 -0.6
2,886,995 - MPMX26_02804 0.89 -0.4
2,887,028 - +0.5
2,887,031 - +0.9
2,887,031 - +0.9
2,887,049 - -0.1
2,887,049 - +0.4
2,887,049 - +0.1
2,887,049 - +0.0
2,887,049 - -1.6
2,887,049 - -1.1
2,887,049 - -0.6
2,887,049 - +0.3
2,887,049 - -0.8
2,887,049 - +0.2
2,887,049 - +0.4
2,887,049 - +0.3
2,887,049 - -2.0
2,887,049 - +1.7
2,887,049 - +0.2
2,887,049 - -0.0
2,887,049 - -0.7
2,887,049 - +0.6
2,887,049 - +1.5
2,887,049 - -0.3
2,887,049 - -1.6
2,887,049 - +0.8
2,887,049 - +1.1
2,887,049 - +0.9
2,887,049 - -0.4
2,887,049 - -0.8
2,887,049 - -0.1
2,887,049 - +0.5
2,887,049 - +1.9
2,887,049 - -0.1
2,887,049 - -0.0
2,887,054 - -0.1
2,887,054 - -0.5
2,887,095 - -0.2
2,887,152 - +0.1
2,887,172 - -0.4
2,887,179 - -0.1
2,887,220 - MPMX26_02805 0.14 -1.0
2,887,228 - MPMX26_02805 0.16 -0.5
2,887,228 - MPMX26_02805 0.16 +1.0
2,887,228 - MPMX26_02805 0.16 -0.7
2,887,228 - MPMX26_02805 0.16 +0.9
2,887,228 - MPMX26_02805 0.16 -0.2
2,887,259 - MPMX26_02805 0.21 +0.3
2,887,266 - MPMX26_02805 0.22 +0.2
2,887,268 - MPMX26_02805 0.23 -0.4
2,887,276 - MPMX26_02805 0.24 -0.6
2,887,290 - MPMX26_02805 0.26 -0.6
2,887,311 - MPMX26_02805 0.30 -0.2
2,887,311 - MPMX26_02805 0.30 -0.7
2,887,321 - MPMX26_02805 0.31 -0.5
2,887,321 - MPMX26_02805 0.31 -1.2
2,887,327 - MPMX26_02805 0.32 +0.1
2,887,327 - MPMX26_02805 0.32 -0.1
2,887,367 - MPMX26_02805 0.39 -1.6
2,887,372 - MPMX26_02805 0.40 +0.5
2,887,512 - MPMX26_02805 0.64 -0.3
2,887,512 - MPMX26_02805 0.64 -1.1
2,887,551 - MPMX26_02805 0.70 -0.7
2,887,551 - MPMX26_02805 0.70 -0.6
2,887,551 - MPMX26_02805 0.70 -0.8
2,887,583 - MPMX26_02805 0.76 -1.5
2,887,588 - MPMX26_02805 0.77 +0.5
2,887,613 - MPMX26_02805 0.81 -0.2
2,887,636 - MPMX26_02805 0.85 -0.6
2,887,642 - MPMX26_02805 0.86 -0.6
2,887,642 - MPMX26_02805 0.86 -0.7
2,887,652 - MPMX26_02805 0.87 +0.9
2,887,661 - MPMX26_02805 0.89 -0.6
2,887,680 - -1.4
2,887,687 - -0.7
2,887,692 - +0.2
2,887,693 - -1.4
2,887,706 - -1.3
2,888,177 - MPMX26_02806 0.27 +0.2
2,888,249 - MPMX26_02806 0.35 -0.1
2,888,659 - MPMX26_02806 0.83 -0.3
2,889,187 + +0.2
2,889,195 - +0.1
2,889,195 - +0.8
2,889,195 - -0.6
2,889,205 - -0.8
2,889,205 - -0.2
2,889,214 - -0.9
2,889,248 - -0.7
2,889,258 - -0.1
2,889,258 - -0.1
2,889,273 - -0.1
2,889,273 - +0.8
2,889,330 - MPMX26_02807 0.10 -2.2
2,889,342 - MPMX26_02807 0.11 -0.1
2,889,349 - MPMX26_02807 0.12 -0.0
2,889,349 - MPMX26_02807 0.12 +0.5
2,889,353 - MPMX26_02807 0.12 -0.2
2,889,353 - MPMX26_02807 0.12 +0.8
2,889,353 - MPMX26_02807 0.12 +0.4
2,889,363 - MPMX26_02807 0.13 +0.4
2,889,378 - MPMX26_02807 0.14 +1.8
2,889,378 - MPMX26_02807 0.14 +0.7
2,889,378 - MPMX26_02807 0.14 +0.3
2,889,378 - MPMX26_02807 0.14 -0.4
2,889,378 - MPMX26_02807 0.14 -0.0
2,889,426 - MPMX26_02807 0.17 +0.0
2,889,447 - MPMX26_02807 0.19 +0.0
2,889,447 - MPMX26_02807 0.19 -0.2
2,889,447 - MPMX26_02807 0.19 -1.1
2,889,455 - MPMX26_02807 0.19 -0.5
2,889,464 - MPMX26_02807 0.20 -0.1
2,889,465 - MPMX26_02807 0.20 +0.4
2,889,470 - MPMX26_02807 0.20 +0.2
2,889,470 - MPMX26_02807 0.20 +0.1
2,889,470 - MPMX26_02807 0.20 -0.8
2,889,470 - MPMX26_02807 0.20 -0.4
2,889,488 - MPMX26_02807 0.22 +0.6
2,889,494 - MPMX26_02807 0.22 -0.4
2,889,494 - MPMX26_02807 0.22 -0.1
2,889,494 - MPMX26_02807 0.22 -0.8
2,889,502 - MPMX26_02807 0.23 +1.0
2,889,504 - MPMX26_02807 0.23 +0.3
2,889,504 - MPMX26_02807 0.23 +0.5
2,889,511 + MPMX26_02807 0.23 +0.5
2,889,519 - MPMX26_02807 0.24 -0.1
2,889,527 - MPMX26_02807 0.24 -0.1
2,889,527 - MPMX26_02807 0.24 +0.3
2,889,527 - MPMX26_02807 0.24 +0.1
2,889,527 - MPMX26_02807 0.24 -0.2
2,889,575 - MPMX26_02807 0.28 -0.4
2,889,583 - MPMX26_02807 0.28 +0.1
2,889,619 - MPMX26_02807 0.31 +0.2
2,889,626 - MPMX26_02807 0.31 +0.5
2,889,651 - MPMX26_02807 0.33 -0.1
2,889,661 - MPMX26_02807 0.34 +1.0
2,889,661 - MPMX26_02807 0.34 +0.0
2,889,661 - MPMX26_02807 0.34 +0.3
2,889,661 - MPMX26_02807 0.34 +0.4
2,889,661 - MPMX26_02807 0.34 +0.4
2,889,661 - MPMX26_02807 0.34 -0.8
2,889,666 - MPMX26_02807 0.34 -0.9
2,889,666 - MPMX26_02807 0.34 -0.6
2,889,685 - MPMX26_02807 0.35 -0.4
2,889,695 - MPMX26_02807 0.36 -0.4
2,889,695 - MPMX26_02807 0.36 -0.1
2,889,695 - MPMX26_02807 0.36 +0.3
2,889,695 - MPMX26_02807 0.36 +0.2
2,889,697 - MPMX26_02807 0.36 -0.2
2,889,703 - MPMX26_02807 0.37 -0.1
2,889,703 - MPMX26_02807 0.37 -0.0
2,889,703 - MPMX26_02807 0.37 -0.4
2,889,703 - MPMX26_02807 0.37 +0.3
2,889,705 - MPMX26_02807 0.37 +0.3
2,889,713 - MPMX26_02807 0.37 -0.0
2,889,719 - MPMX26_02807 0.38 -0.4
2,889,724 - MPMX26_02807 0.38 -0.4
2,889,752 - MPMX26_02807 0.40 -1.7
2,889,757 - MPMX26_02807 0.40 +0.1
2,889,795 - MPMX26_02807 0.43 -0.1
2,889,795 - MPMX26_02807 0.43 +0.3

Or see this region's nucleotide sequence