Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02574

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02572 and MPMX26_02573 are separated by 128 nucleotidesMPMX26_02573 and MPMX26_02574 are separated by 3 nucleotidesMPMX26_02574 and MPMX26_02575 are separated by 13 nucleotidesMPMX26_02575 and MPMX26_02576 are separated by 135 nucleotides MPMX26_02572: MPMX26_02572 - hypothetical protein, at 2,664,202 to 2,665,629 _02572 MPMX26_02573: MPMX26_02573 - Ribosomal RNA small subunit methyltransferase J, at 2,665,758 to 2,666,558 _02573 MPMX26_02574: MPMX26_02574 - Undecaprenyl-diphosphatase, at 2,666,562 to 2,667,386 _02574 MPMX26_02575: MPMX26_02575 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 2,667,400 to 2,668,065 _02575 MPMX26_02576: MPMX26_02576 - Protein YrdA, at 2,668,201 to 2,668,731 _02576 Position (kb) 2666 2667 2668Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2665.841 kb on - strand, within MPMX26_02573at 2665.901 kb on - strand, within MPMX26_02573at 2665.941 kb on - strand, within MPMX26_02573at 2665.941 kb on - strand, within MPMX26_02573at 2665.946 kb on - strand, within MPMX26_02573at 2665.997 kb on - strand, within MPMX26_02573at 2666.036 kb on - strand, within MPMX26_02573at 2666.052 kb on - strand, within MPMX26_02573at 2666.052 kb on - strand, within MPMX26_02573at 2666.052 kb on - strand, within MPMX26_02573at 2666.060 kb on - strand, within MPMX26_02573at 2666.132 kb on - strand, within MPMX26_02573at 2666.148 kb on - strand, within MPMX26_02573at 2666.148 kb on - strand, within MPMX26_02573at 2666.148 kb on - strand, within MPMX26_02573at 2666.148 kb on - strand, within MPMX26_02573at 2666.159 kb on - strand, within MPMX26_02573at 2666.198 kb on - strand, within MPMX26_02573at 2666.246 kb on - strand, within MPMX26_02573at 2666.246 kb on - strand, within MPMX26_02573at 2666.246 kb on - strand, within MPMX26_02573at 2666.246 kb on - strand, within MPMX26_02573at 2666.398 kb on - strand, within MPMX26_02573at 2666.398 kb on - strand, within MPMX26_02573at 2666.398 kb on - strand, within MPMX26_02573at 2666.415 kb on - strand, within MPMX26_02573at 2666.502 kb on - strandat 2666.504 kb on - strandat 2666.507 kb on - strandat 2666.507 kb on - strandat 2666.507 kb on - strandat 2666.507 kb on - strandat 2666.507 kb on - strandat 2666.512 kb on - strandat 2666.512 kb on - strandat 2666.517 kb on - strandat 2666.517 kb on - strandat 2666.517 kb on - strandat 2666.517 kb on - strandat 2666.517 kb on - strandat 2666.517 kb on - strandat 2666.517 kb on - strandat 2666.522 kb on - strandat 2666.522 kb on - strandat 2666.522 kb on - strandat 2666.529 kb on - strandat 2666.529 kb on - strandat 2666.529 kb on - strandat 2666.534 kb on - strandat 2666.540 kb on - strandat 2666.540 kb on - strandat 2666.568 kb on - strandat 2666.594 kb on - strandat 2666.604 kb on - strandat 2666.769 kb on - strand, within MPMX26_02574at 2666.769 kb on - strand, within MPMX26_02574at 2666.780 kb on - strand, within MPMX26_02574at 2666.793 kb on - strand, within MPMX26_02574at 2666.806 kb on - strand, within MPMX26_02574at 2666.806 kb on - strand, within MPMX26_02574at 2666.849 kb on - strand, within MPMX26_02574at 2666.919 kb on - strand, within MPMX26_02574at 2666.923 kb on - strand, within MPMX26_02574at 2666.923 kb on - strand, within MPMX26_02574at 2666.924 kb on - strand, within MPMX26_02574at 2666.929 kb on - strand, within MPMX26_02574at 2667.009 kb on - strand, within MPMX26_02574at 2667.069 kb on - strand, within MPMX26_02574at 2667.088 kb on - strand, within MPMX26_02574at 2667.089 kb on - strand, within MPMX26_02574at 2667.089 kb on - strand, within MPMX26_02574at 2667.098 kb on - strand, within MPMX26_02574at 2667.167 kb on - strand, within MPMX26_02574at 2667.167 kb on - strand, within MPMX26_02574at 2667.167 kb on - strand, within MPMX26_02574at 2667.173 kb on - strand, within MPMX26_02574at 2667.188 kb on - strand, within MPMX26_02574at 2667.188 kb on - strand, within MPMX26_02574at 2667.207 kb on - strand, within MPMX26_02574at 2667.233 kb on - strand, within MPMX26_02574at 2667.253 kb on - strand, within MPMX26_02574at 2667.349 kb on - strandat 2667.369 kb on - strandat 2667.369 kb on - strandat 2667.388 kb on - strandat 2667.411 kb on - strandat 2667.412 kb on - strandat 2667.417 kb on - strandat 2668.112 kb on - strandat 2668.222 kb on - strandat 2668.232 kb on - strandat 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576at 2668.255 kb on - strand, within MPMX26_02576

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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2,665,841 - MPMX26_02573 0.10 -1.2
2,665,901 - MPMX26_02573 0.18 +0.5
2,665,941 - MPMX26_02573 0.23 -0.6
2,665,941 - MPMX26_02573 0.23 -0.4
2,665,946 - MPMX26_02573 0.23 -0.7
2,665,997 - MPMX26_02573 0.30 +2.5
2,666,036 - MPMX26_02573 0.35 -0.3
2,666,052 - MPMX26_02573 0.37 +0.5
2,666,052 - MPMX26_02573 0.37 -0.8
2,666,052 - MPMX26_02573 0.37 -1.4
2,666,060 - MPMX26_02573 0.38 -1.0
2,666,132 - MPMX26_02573 0.47 -0.6
2,666,148 - MPMX26_02573 0.49 +0.9
2,666,148 - MPMX26_02573 0.49 -0.6
2,666,148 - MPMX26_02573 0.49 -0.5
2,666,148 - MPMX26_02573 0.49 -0.8
2,666,159 - MPMX26_02573 0.50 -0.9
2,666,198 - MPMX26_02573 0.55 +0.2
2,666,246 - MPMX26_02573 0.61 -0.2
2,666,246 - MPMX26_02573 0.61 -0.8
2,666,246 - MPMX26_02573 0.61 -0.1
2,666,246 - MPMX26_02573 0.61 -1.3
2,666,398 - MPMX26_02573 0.80 -1.2
2,666,398 - MPMX26_02573 0.80 -0.3
2,666,398 - MPMX26_02573 0.80 -0.1
2,666,415 - MPMX26_02573 0.82 -0.1
2,666,502 - -0.7
2,666,504 - -1.6
2,666,507 - -2.3
2,666,507 - -1.2
2,666,507 - +0.1
2,666,507 - -0.2
2,666,507 - +0.9
2,666,512 - -0.9
2,666,512 - +1.5
2,666,517 - +0.9
2,666,517 - +1.1
2,666,517 - +1.1
2,666,517 - -2.3
2,666,517 - +0.1
2,666,517 - +0.7
2,666,517 - -1.8
2,666,522 - -0.6
2,666,522 - -0.9
2,666,522 - -0.6
2,666,529 - -0.9
2,666,529 - -0.7
2,666,529 - -1.1
2,666,534 - -0.7
2,666,540 - -0.8
2,666,540 - -1.4
2,666,568 - -0.5
2,666,594 - -1.3
2,666,604 - -1.5
2,666,769 - MPMX26_02574 0.25 -0.8
2,666,769 - MPMX26_02574 0.25 -1.2
2,666,780 - MPMX26_02574 0.26 -1.1
2,666,793 - MPMX26_02574 0.28 -2.5
2,666,806 - MPMX26_02574 0.30 -2.8
2,666,806 - MPMX26_02574 0.30 -1.9
2,666,849 - MPMX26_02574 0.35 -2.8
2,666,919 - MPMX26_02574 0.43 -2.8
2,666,923 - MPMX26_02574 0.44 -0.6
2,666,923 - MPMX26_02574 0.44 -0.9
2,666,924 - MPMX26_02574 0.44 -1.4
2,666,929 - MPMX26_02574 0.44 -2.8
2,667,009 - MPMX26_02574 0.54 -1.2
2,667,069 - MPMX26_02574 0.61 -0.5
2,667,088 - MPMX26_02574 0.64 -0.8
2,667,089 - MPMX26_02574 0.64 -2.2
2,667,089 - MPMX26_02574 0.64 -1.7
2,667,098 - MPMX26_02574 0.65 -2.1
2,667,167 - MPMX26_02574 0.73 -1.0
2,667,167 - MPMX26_02574 0.73 -1.9
2,667,167 - MPMX26_02574 0.73 +0.5
2,667,173 - MPMX26_02574 0.74 -1.7
2,667,188 - MPMX26_02574 0.76 -3.4
2,667,188 - MPMX26_02574 0.76 -2.0
2,667,207 - MPMX26_02574 0.78 -2.0
2,667,233 - MPMX26_02574 0.81 -1.8
2,667,253 - MPMX26_02574 0.84 -1.8
2,667,349 - -1.8
2,667,369 - -0.6
2,667,369 - -1.7
2,667,388 - -0.9
2,667,411 - -0.8
2,667,412 - +0.5
2,667,417 - -0.3
2,668,112 - +0.2
2,668,222 - +0.3
2,668,232 - +1.3
2,668,255 - MPMX26_02576 0.10 -0.0
2,668,255 - MPMX26_02576 0.10 +0.6
2,668,255 - MPMX26_02576 0.10 +0.1
2,668,255 - MPMX26_02576 0.10 +0.2
2,668,255 - MPMX26_02576 0.10 +0.7
2,668,255 - MPMX26_02576 0.10 -0.5
2,668,255 - MPMX26_02576 0.10 +1.2
2,668,255 - MPMX26_02576 0.10 -1.2

Or see this region's nucleotide sequence