Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01761

Experiment: no stress control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01760 and MPMX26_01761 are separated by 307 nucleotidesMPMX26_01761 and MPMX26_01762 are separated by 41 nucleotidesMPMX26_01762 and MPMX26_01763 are separated by 51 nucleotides MPMX26_01760: MPMX26_01760 - Aminopeptidase N, at 1,816,915 to 1,819,521 _01760 MPMX26_01761: MPMX26_01761 - hypothetical protein, at 1,819,829 to 1,820,992 _01761 MPMX26_01762: MPMX26_01762 - Hydroxyethylthiazole kinase, at 1,821,034 to 1,821,864 _01762 MPMX26_01763: MPMX26_01763 - hypothetical protein, at 1,821,916 to 1,822,284 _01763 Position (kb) 1819 1820 1821Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1818.836 kb on - strand, within MPMX26_01760at 1818.888 kb on - strand, within MPMX26_01760at 1818.907 kb on - strand, within MPMX26_01760at 1819.021 kb on - strand, within MPMX26_01760at 1819.036 kb on - strand, within MPMX26_01760at 1819.041 kb on - strand, within MPMX26_01760at 1819.069 kb on - strand, within MPMX26_01760at 1819.069 kb on - strand, within MPMX26_01760at 1819.069 kb on - strand, within MPMX26_01760at 1819.069 kb on - strand, within MPMX26_01760at 1819.069 kb on - strand, within MPMX26_01760at 1819.069 kb on - strand, within MPMX26_01760at 1819.144 kb on - strand, within MPMX26_01760at 1819.149 kb on - strand, within MPMX26_01760at 1819.156 kb on - strand, within MPMX26_01760at 1819.186 kb on - strand, within MPMX26_01760at 1819.186 kb on - strand, within MPMX26_01760at 1819.196 kb on - strand, within MPMX26_01760at 1819.198 kb on - strand, within MPMX26_01760at 1819.198 kb on - strand, within MPMX26_01760at 1819.227 kb on - strand, within MPMX26_01760at 1819.227 kb on - strand, within MPMX26_01760at 1819.266 kb on - strandat 1819.297 kb on - strandat 1819.297 kb on - strandat 1819.347 kb on - strandat 1819.347 kb on - strandat 1819.417 kb on - strandat 1819.434 kb on - strandat 1819.444 kb on - strandat 1819.475 kb on - strandat 1819.497 kb on - strandat 1819.497 kb on - strandat 1819.497 kb on - strandat 1819.524 kb on - strandat 1819.524 kb on - strandat 1819.847 kb on + strandat 1819.847 kb on + strandat 1819.847 kb on + strandat 1819.847 kb on + strandat 1820.219 kb on + strand, within MPMX26_01761at 1820.303 kb on + strand, within MPMX26_01761at 1820.375 kb on + strand, within MPMX26_01761at 1820.437 kb on - strand, within MPMX26_01761at 1820.836 kb on - strand, within MPMX26_01761at 1820.933 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1821.072 kb on + strandat 1821.103 kb on + strandat 1821.103 kb on + strandat 1821.144 kb on + strand, within MPMX26_01762at 1821.144 kb on + strand, within MPMX26_01762at 1821.177 kb on + strand, within MPMX26_01762at 1821.186 kb on + strand, within MPMX26_01762at 1821.250 kb on + strand, within MPMX26_01762at 1821.266 kb on + strand, within MPMX26_01762at 1821.276 kb on + strand, within MPMX26_01762at 1821.276 kb on + strand, within MPMX26_01762at 1821.276 kb on + strand, within MPMX26_01762at 1821.282 kb on + strand, within MPMX26_01762at 1821.331 kb on + strand, within MPMX26_01762at 1821.331 kb on + strand, within MPMX26_01762at 1821.331 kb on + strand, within MPMX26_01762at 1821.331 kb on + strand, within MPMX26_01762at 1821.331 kb on + strand, within MPMX26_01762at 1821.339 kb on + strand, within MPMX26_01762at 1821.339 kb on + strand, within MPMX26_01762at 1821.358 kb on + strand, within MPMX26_01762at 1821.369 kb on + strand, within MPMX26_01762at 1821.400 kb on + strand, within MPMX26_01762at 1821.420 kb on + strand, within MPMX26_01762at 1821.430 kb on + strand, within MPMX26_01762at 1821.465 kb on + strand, within MPMX26_01762at 1821.465 kb on + strand, within MPMX26_01762at 1821.465 kb on + strand, within MPMX26_01762at 1821.465 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.484 kb on + strand, within MPMX26_01762at 1821.484 kb on + strand, within MPMX26_01762at 1821.486 kb on + strand, within MPMX26_01762at 1821.513 kb on + strand, within MPMX26_01762at 1821.513 kb on + strand, within MPMX26_01762at 1821.540 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.633 kb on + strand, within MPMX26_01762at 1821.640 kb on + strand, within MPMX26_01762at 1821.666 kb on + strand, within MPMX26_01762at 1821.673 kb on + strand, within MPMX26_01762at 1821.691 kb on + strand, within MPMX26_01762at 1821.930 kb on - strandat 1821.974 kb on - strand, within MPMX26_01763at 1821.974 kb on - strand, within MPMX26_01763

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
remove
1,818,836 - MPMX26_01760 0.74 +0.5
1,818,888 - MPMX26_01760 0.76 -0.3
1,818,907 - MPMX26_01760 0.76 +0.2
1,819,021 - MPMX26_01760 0.81 +1.5
1,819,036 - MPMX26_01760 0.81 +0.2
1,819,041 - MPMX26_01760 0.82 +0.0
1,819,069 - MPMX26_01760 0.83 +0.5
1,819,069 - MPMX26_01760 0.83 -1.8
1,819,069 - MPMX26_01760 0.83 +0.1
1,819,069 - MPMX26_01760 0.83 -0.5
1,819,069 - MPMX26_01760 0.83 +0.5
1,819,069 - MPMX26_01760 0.83 -0.9
1,819,144 - MPMX26_01760 0.86 +0.1
1,819,149 - MPMX26_01760 0.86 +0.0
1,819,156 - MPMX26_01760 0.86 +0.7
1,819,186 - MPMX26_01760 0.87 +0.3
1,819,186 - MPMX26_01760 0.87 +0.0
1,819,196 - MPMX26_01760 0.87 +1.5
1,819,198 - MPMX26_01760 0.88 -1.4
1,819,198 - MPMX26_01760 0.88 -0.1
1,819,227 - MPMX26_01760 0.89 -0.3
1,819,227 - MPMX26_01760 0.89 +0.2
1,819,266 - +0.5
1,819,297 - -0.0
1,819,297 - -0.6
1,819,347 - -0.2
1,819,347 - +0.7
1,819,417 - +0.9
1,819,434 - +0.1
1,819,444 - +0.4
1,819,475 - -0.8
1,819,497 - +0.3
1,819,497 - -1.0
1,819,497 - -0.7
1,819,524 - -0.9
1,819,524 - +0.4
1,819,847 + -0.7
1,819,847 + -1.9
1,819,847 + -1.4
1,819,847 + -0.9
1,820,219 + MPMX26_01761 0.34 -0.3
1,820,303 + MPMX26_01761 0.41 -0.6
1,820,375 + MPMX26_01761 0.47 -0.8
1,820,437 - MPMX26_01761 0.52 -1.3
1,820,836 - MPMX26_01761 0.87 -0.5
1,820,933 + -0.2
1,820,947 + +1.5
1,820,947 + -1.2
1,820,947 + +0.0
1,820,947 + -0.7
1,820,947 + +0.7
1,820,947 + -0.4
1,820,947 + -1.0
1,820,947 + -0.5
1,821,072 + +0.3
1,821,103 + -0.8
1,821,103 + -0.9
1,821,144 + MPMX26_01762 0.13 +0.5
1,821,144 + MPMX26_01762 0.13 +4.1
1,821,177 + MPMX26_01762 0.17 -1.9
1,821,186 + MPMX26_01762 0.18 -1.6
1,821,250 + MPMX26_01762 0.26 +0.1
1,821,266 + MPMX26_01762 0.28 +0.3
1,821,276 + MPMX26_01762 0.29 -0.6
1,821,276 + MPMX26_01762 0.29 -0.5
1,821,276 + MPMX26_01762 0.29 -0.5
1,821,282 + MPMX26_01762 0.30 -0.2
1,821,331 + MPMX26_01762 0.36 -0.6
1,821,331 + MPMX26_01762 0.36 -3.0
1,821,331 + MPMX26_01762 0.36 -0.9
1,821,331 + MPMX26_01762 0.36 +0.5
1,821,331 + MPMX26_01762 0.36 -1.0
1,821,339 + MPMX26_01762 0.37 -0.6
1,821,339 + MPMX26_01762 0.37 +0.1
1,821,358 + MPMX26_01762 0.39 -0.7
1,821,369 + MPMX26_01762 0.40 -0.8
1,821,400 + MPMX26_01762 0.44 -1.1
1,821,420 + MPMX26_01762 0.46 -1.6
1,821,430 + MPMX26_01762 0.48 -0.1
1,821,465 + MPMX26_01762 0.52 -0.2
1,821,465 + MPMX26_01762 0.52 -0.6
1,821,465 + MPMX26_01762 0.52 -0.3
1,821,465 + MPMX26_01762 0.52 -0.4
1,821,472 + MPMX26_01762 0.53 -0.6
1,821,472 + MPMX26_01762 0.53 +0.0
1,821,472 + MPMX26_01762 0.53 -1.3
1,821,472 + MPMX26_01762 0.53 -0.2
1,821,472 + MPMX26_01762 0.53 -1.3
1,821,472 + MPMX26_01762 0.53 -1.6
1,821,472 + MPMX26_01762 0.53 -0.9
1,821,472 + MPMX26_01762 0.53 +0.2
1,821,472 + MPMX26_01762 0.53 +0.5
1,821,472 + MPMX26_01762 0.53 -1.1
1,821,472 + MPMX26_01762 0.53 -0.6
1,821,484 + MPMX26_01762 0.54 -0.5
1,821,484 + MPMX26_01762 0.54 -1.1
1,821,486 + MPMX26_01762 0.54 -0.8
1,821,513 + MPMX26_01762 0.58 -0.7
1,821,513 + MPMX26_01762 0.58 +0.1
1,821,540 + MPMX26_01762 0.61 -1.5
1,821,603 + MPMX26_01762 0.68 -0.5
1,821,603 + MPMX26_01762 0.68 -1.1
1,821,603 + MPMX26_01762 0.68 -0.7
1,821,603 + MPMX26_01762 0.68 -1.0
1,821,603 + MPMX26_01762 0.68 -0.9
1,821,603 + MPMX26_01762 0.68 +1.1
1,821,633 + MPMX26_01762 0.72 -0.6
1,821,640 + MPMX26_01762 0.73 -0.8
1,821,666 + MPMX26_01762 0.76 -0.6
1,821,673 + MPMX26_01762 0.77 -0.6
1,821,691 + MPMX26_01762 0.79 -0.2
1,821,930 - -1.0
1,821,974 - MPMX26_01763 0.16 -0.1
1,821,974 - MPMX26_01763 0.16 +0.5

Or see this region's nucleotide sequence