Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00597

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00595 and MPMX26_00596 are separated by 20 nucleotidesMPMX26_00596 and MPMX26_00597 are separated by 3 nucleotidesMPMX26_00597 and MPMX26_00598 are separated by 111 nucleotidesMPMX26_00598 and MPMX26_00599 are separated by 92 nucleotides MPMX26_00595: MPMX26_00595 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 628,227 to 629,192 _00595 MPMX26_00596: MPMX26_00596 - Ribosomal RNA small subunit methyltransferase A, at 629,213 to 630,025 _00596 MPMX26_00597: MPMX26_00597 - Bis(5'-nucleosyl)-tetraphosphatase, symmetrical, at 630,029 to 630,871 _00597 MPMX26_00598: MPMX26_00598 - hypothetical protein, at 630,983 to 631,432 _00598 MPMX26_00599: MPMX26_00599 - Holin-like protein CidB, at 631,525 to 632,193 _00599 Position (kb) 630 631Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 629.228 kb on + strandat 629.848 kb on + strand, within MPMX26_00596at 630.062 kb on + strandat 630.067 kb on + strandat 630.067 kb on + strandat 630.072 kb on + strandat 630.072 kb on + strandat 630.109 kb on + strandat 630.161 kb on + strand, within MPMX26_00597at 630.219 kb on + strand, within MPMX26_00597at 630.219 kb on + strand, within MPMX26_00597at 630.237 kb on + strand, within MPMX26_00597at 630.251 kb on + strand, within MPMX26_00597at 630.292 kb on + strand, within MPMX26_00597at 630.317 kb on + strand, within MPMX26_00597at 630.317 kb on + strand, within MPMX26_00597at 630.337 kb on + strand, within MPMX26_00597at 630.358 kb on + strand, within MPMX26_00597at 630.389 kb on + strand, within MPMX26_00597at 630.423 kb on + strand, within MPMX26_00597at 630.428 kb on + strand, within MPMX26_00597at 630.441 kb on + strand, within MPMX26_00597at 630.454 kb on + strand, within MPMX26_00597at 630.460 kb on + strand, within MPMX26_00597at 630.488 kb on + strand, within MPMX26_00597at 630.488 kb on + strand, within MPMX26_00597at 630.512 kb on + strand, within MPMX26_00597at 630.512 kb on + strand, within MPMX26_00597at 630.512 kb on + strand, within MPMX26_00597at 630.512 kb on + strand, within MPMX26_00597at 630.514 kb on + strand, within MPMX26_00597at 630.524 kb on + strand, within MPMX26_00597at 630.524 kb on + strand, within MPMX26_00597at 630.524 kb on + strand, within MPMX26_00597at 630.524 kb on + strand, within MPMX26_00597at 630.524 kb on + strand, within MPMX26_00597at 630.573 kb on + strand, within MPMX26_00597at 630.573 kb on + strand, within MPMX26_00597at 630.590 kb on + strand, within MPMX26_00597at 630.599 kb on + strand, within MPMX26_00597at 630.599 kb on + strand, within MPMX26_00597at 630.609 kb on + strand, within MPMX26_00597at 630.626 kb on + strand, within MPMX26_00597at 630.722 kb on + strand, within MPMX26_00597at 630.740 kb on + strand, within MPMX26_00597at 630.740 kb on + strand, within MPMX26_00597at 630.740 kb on + strand, within MPMX26_00597at 630.740 kb on + strand, within MPMX26_00597at 630.740 kb on + strand, within MPMX26_00597at 630.740 kb on + strand, within MPMX26_00597at 630.740 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.748 kb on + strand, within MPMX26_00597at 630.782 kb on + strand, within MPMX26_00597at 630.788 kb on + strandat 630.856 kb on + strandat 630.866 kb on + strandat 630.866 kb on + strandat 630.866 kb on + strandat 630.892 kb on + strandat 630.994 kb on - strandat 631.154 kb on - strand, within MPMX26_00598at 631.159 kb on - strand, within MPMX26_00598at 631.168 kb on - strand, within MPMX26_00598at 631.168 kb on - strand, within MPMX26_00598at 631.201 kb on - strand, within MPMX26_00598at 631.239 kb on - strand, within MPMX26_00598at 631.239 kb on - strand, within MPMX26_00598at 631.239 kb on - strand, within MPMX26_00598at 631.246 kb on - strand, within MPMX26_00598at 631.246 kb on - strand, within MPMX26_00598at 631.262 kb on - strand, within MPMX26_00598at 631.364 kb on - strand, within MPMX26_00598at 631.364 kb on - strand, within MPMX26_00598at 631.385 kb on - strand, within MPMX26_00598at 631.385 kb on - strand, within MPMX26_00598at 631.385 kb on - strand, within MPMX26_00598at 631.638 kb on - strand, within MPMX26_00599at 631.638 kb on - strand, within MPMX26_00599at 631.638 kb on - strand, within MPMX26_00599at 631.671 kb on - strand, within MPMX26_00599at 631.671 kb on - strand, within MPMX26_00599at 631.671 kb on - strand, within MPMX26_00599at 631.671 kb on - strand, within MPMX26_00599at 631.671 kb on - strand, within MPMX26_00599at 631.701 kb on - strand, within MPMX26_00599at 631.776 kb on - strand, within MPMX26_00599at 631.776 kb on - strand, within MPMX26_00599at 631.806 kb on - strand, within MPMX26_00599at 631.845 kb on - strand, within MPMX26_00599at 631.845 kb on - strand, within MPMX26_00599

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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629,228 + +1.0
629,848 + MPMX26_00596 0.78 +2.5
630,062 + -1.5
630,067 + -0.9
630,067 + -2.8
630,072 + -1.3
630,072 + -2.0
630,109 + -1.0
630,161 + MPMX26_00597 0.16 -2.3
630,219 + MPMX26_00597 0.23 -0.1
630,219 + MPMX26_00597 0.23 -0.3
630,237 + MPMX26_00597 0.25 -0.1
630,251 + MPMX26_00597 0.26 -1.8
630,292 + MPMX26_00597 0.31 -0.3
630,317 + MPMX26_00597 0.34 -2.5
630,317 + MPMX26_00597 0.34 -1.8
630,337 + MPMX26_00597 0.37 +0.2
630,358 + MPMX26_00597 0.39 +0.4
630,389 + MPMX26_00597 0.43 -3.1
630,423 + MPMX26_00597 0.47 -0.6
630,428 + MPMX26_00597 0.47 -1.4
630,441 + MPMX26_00597 0.49 +0.5
630,454 + MPMX26_00597 0.50 +0.5
630,460 + MPMX26_00597 0.51 -0.0
630,488 + MPMX26_00597 0.54 -1.5
630,488 + MPMX26_00597 0.54 -1.0
630,512 + MPMX26_00597 0.57 -0.8
630,512 + MPMX26_00597 0.57 -1.4
630,512 + MPMX26_00597 0.57 +0.2
630,512 + MPMX26_00597 0.57 -1.3
630,514 + MPMX26_00597 0.58 -1.2
630,524 + MPMX26_00597 0.59 +0.1
630,524 + MPMX26_00597 0.59 -3.4
630,524 + MPMX26_00597 0.59 -1.2
630,524 + MPMX26_00597 0.59 -0.8
630,524 + MPMX26_00597 0.59 -0.5
630,573 + MPMX26_00597 0.65 +1.1
630,573 + MPMX26_00597 0.65 -0.6
630,590 + MPMX26_00597 0.67 -1.5
630,599 + MPMX26_00597 0.68 -1.3
630,599 + MPMX26_00597 0.68 -1.7
630,609 + MPMX26_00597 0.69 -0.6
630,626 + MPMX26_00597 0.71 -0.7
630,722 + MPMX26_00597 0.82 -2.4
630,740 + MPMX26_00597 0.84 +1.3
630,740 + MPMX26_00597 0.84 -1.7
630,740 + MPMX26_00597 0.84 +0.5
630,740 + MPMX26_00597 0.84 +0.4
630,740 + MPMX26_00597 0.84 -2.8
630,740 + MPMX26_00597 0.84 -2.0
630,740 + MPMX26_00597 0.84 -1.2
630,748 + MPMX26_00597 0.85 +1.5
630,748 + MPMX26_00597 0.85 -1.2
630,748 + MPMX26_00597 0.85 -0.8
630,748 + MPMX26_00597 0.85 -2.4
630,748 + MPMX26_00597 0.85 -1.6
630,748 + MPMX26_00597 0.85 -1.0
630,748 + MPMX26_00597 0.85 +0.2
630,748 + MPMX26_00597 0.85 -0.8
630,748 + MPMX26_00597 0.85 -2.9
630,748 + MPMX26_00597 0.85 -2.4
630,748 + MPMX26_00597 0.85 -2.0
630,748 + MPMX26_00597 0.85 -1.7
630,748 + MPMX26_00597 0.85 -0.2
630,748 + MPMX26_00597 0.85 -3.0
630,748 + MPMX26_00597 0.85 -1.9
630,748 + MPMX26_00597 0.85 -0.7
630,748 + MPMX26_00597 0.85 -0.9
630,782 + MPMX26_00597 0.89 -2.1
630,788 + -1.2
630,856 + -0.4
630,866 + +0.2
630,866 + +0.4
630,866 + +0.5
630,892 + +0.3
630,994 - -0.8
631,154 - MPMX26_00598 0.38 +0.1
631,159 - MPMX26_00598 0.39 -0.2
631,168 - MPMX26_00598 0.41 +0.7
631,168 - MPMX26_00598 0.41 -0.2
631,201 - MPMX26_00598 0.48 -0.4
631,239 - MPMX26_00598 0.57 -0.1
631,239 - MPMX26_00598 0.57 +0.8
631,239 - MPMX26_00598 0.57 -0.5
631,246 - MPMX26_00598 0.58 -1.3
631,246 - MPMX26_00598 0.58 -0.3
631,262 - MPMX26_00598 0.62 +1.0
631,364 - MPMX26_00598 0.85 +0.7
631,364 - MPMX26_00598 0.85 -0.7
631,385 - MPMX26_00598 0.89 -0.4
631,385 - MPMX26_00598 0.89 -0.2
631,385 - MPMX26_00598 0.89 -0.4
631,638 - MPMX26_00599 0.17 -0.9
631,638 - MPMX26_00599 0.17 +0.6
631,638 - MPMX26_00599 0.17 +0.1
631,671 - MPMX26_00599 0.22 +3.6
631,671 - MPMX26_00599 0.22 -1.2
631,671 - MPMX26_00599 0.22 -0.1
631,671 - MPMX26_00599 0.22 +0.2
631,671 - MPMX26_00599 0.22 -0.9
631,701 - MPMX26_00599 0.26 +0.1
631,776 - MPMX26_00599 0.38 -1.4
631,776 - MPMX26_00599 0.38 +0.6
631,806 - MPMX26_00599 0.42 +0.6
631,845 - MPMX26_00599 0.48 +0.1
631,845 - MPMX26_00599 0.48 -1.8

Or see this region's nucleotide sequence