Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10535

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10530 and A4249_RS10535 are separated by 81 nucleotidesA4249_RS10535 and A4249_RS10540 are separated by 47 nucleotides A4249_RS10530: A4249_RS10530 - hypothetical protein, at 2,117,179 to 2,118,069 _RS10530 A4249_RS10535: A4249_RS10535 - DUF962 domain-containing protein, at 2,118,151 to 2,118,474 _RS10535 A4249_RS10540: A4249_RS10540 - DEAD/DEAH box helicase, at 2,118,522 to 2,120,420 _RS10540 Position (kb) 2118 2119Strain fitness (log2 ratio) -3 -2 -1 0 1at 2117.227 kb on - strandat 2117.228 kb on + strandat 2117.228 kb on + strandat 2117.228 kb on + strandat 2117.228 kb on + strandat 2117.228 kb on + strandat 2117.228 kb on + strandat 2117.229 kb on - strandat 2117.229 kb on - strandat 2117.229 kb on - strandat 2117.229 kb on - strandat 2117.229 kb on - strandat 2117.229 kb on - strandat 2117.229 kb on - strandat 2117.242 kb on + strandat 2117.242 kb on + strandat 2117.242 kb on + strandat 2117.242 kb on + strandat 2117.242 kb on + strandat 2117.242 kb on + strandat 2117.242 kb on + strandat 2117.243 kb on - strandat 2117.243 kb on - strandat 2117.243 kb on - strandat 2117.243 kb on - strandat 2117.243 kb on - strandat 2117.249 kb on + strandat 2117.318 kb on + strand, within A4249_RS10530at 2117.319 kb on - strand, within A4249_RS10530at 2117.319 kb on - strand, within A4249_RS10530at 2117.319 kb on - strand, within A4249_RS10530at 2117.337 kb on + strand, within A4249_RS10530at 2117.337 kb on + strand, within A4249_RS10530at 2117.337 kb on + strand, within A4249_RS10530at 2117.338 kb on - strand, within A4249_RS10530at 2117.338 kb on - strand, within A4249_RS10530at 2117.517 kb on + strand, within A4249_RS10530at 2117.517 kb on + strand, within A4249_RS10530at 2117.518 kb on - strand, within A4249_RS10530at 2117.546 kb on + strand, within A4249_RS10530at 2117.546 kb on + strand, within A4249_RS10530at 2117.546 kb on + strand, within A4249_RS10530at 2117.547 kb on - strand, within A4249_RS10530at 2117.547 kb on - strand, within A4249_RS10530at 2117.547 kb on - strand, within A4249_RS10530at 2117.645 kb on + strand, within A4249_RS10530at 2117.645 kb on + strand, within A4249_RS10530at 2117.645 kb on + strand, within A4249_RS10530at 2117.645 kb on + strand, within A4249_RS10530at 2117.645 kb on + strand, within A4249_RS10530at 2117.645 kb on + strand, within A4249_RS10530at 2117.645 kb on + strand, within A4249_RS10530at 2117.646 kb on - strand, within A4249_RS10530at 2117.646 kb on - strand, within A4249_RS10530at 2117.646 kb on - strand, within A4249_RS10530at 2117.646 kb on - strand, within A4249_RS10530at 2117.646 kb on - strand, within A4249_RS10530at 2117.646 kb on - strand, within A4249_RS10530at 2117.646 kb on - strand, within A4249_RS10530at 2117.646 kb on - strand, within A4249_RS10530at 2117.646 kb on - strand, within A4249_RS10530at 2117.666 kb on + strand, within A4249_RS10530at 2117.735 kb on + strand, within A4249_RS10530at 2117.735 kb on + strand, within A4249_RS10530at 2117.963 kb on + strand, within A4249_RS10530at 2117.963 kb on + strand, within A4249_RS10530at 2117.963 kb on + strand, within A4249_RS10530at 2117.963 kb on + strand, within A4249_RS10530at 2117.963 kb on + strand, within A4249_RS10530at 2117.963 kb on + strand, within A4249_RS10530at 2117.964 kb on - strand, within A4249_RS10530at 2117.964 kb on - strand, within A4249_RS10530at 2117.964 kb on - strand, within A4249_RS10530at 2117.964 kb on - strand, within A4249_RS10530at 2117.964 kb on - strand, within A4249_RS10530at 2117.964 kb on - strand, within A4249_RS10530at 2117.964 kb on - strand, within A4249_RS10530at 2118.111 kb on + strandat 2118.112 kb on - strandat 2118.112 kb on - strandat 2118.221 kb on + strand, within A4249_RS10535at 2118.222 kb on - strand, within A4249_RS10535at 2118.222 kb on - strand, within A4249_RS10535at 2118.222 kb on - strand, within A4249_RS10535at 2118.222 kb on - strand, within A4249_RS10535at 2118.413 kb on + strand, within A4249_RS10535at 2118.413 kb on + strand, within A4249_RS10535at 2118.413 kb on + strand, within A4249_RS10535at 2118.413 kb on + strand, within A4249_RS10535at 2118.413 kb on + strand, within A4249_RS10535at 2118.413 kb on + strand, within A4249_RS10535at 2118.413 kb on + strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.414 kb on - strand, within A4249_RS10535at 2118.416 kb on + strand, within A4249_RS10535at 2118.416 kb on + strand, within A4249_RS10535at 2118.417 kb on - strand, within A4249_RS10535at 2118.422 kb on + strand, within A4249_RS10535at 2118.422 kb on + strand, within A4249_RS10535at 2118.422 kb on + strand, within A4249_RS10535at 2118.422 kb on + strand, within A4249_RS10535at 2118.422 kb on + strand, within A4249_RS10535at 2118.422 kb on + strand, within A4249_RS10535at 2118.423 kb on - strand, within A4249_RS10535at 2118.423 kb on - strand, within A4249_RS10535at 2118.423 kb on - strand, within A4249_RS10535at 2118.423 kb on - strand, within A4249_RS10535at 2118.592 kb on + strandat 2118.592 kb on + strandat 2118.593 kb on - strandat 2118.593 kb on - strandat 2118.709 kb on + strandat 2118.709 kb on + strandat 2118.709 kb on + strandat 2118.710 kb on - strandat 2118.710 kb on - strandat 2118.710 kb on - strandat 2118.710 kb on - strandat 2118.710 kb on - strandat 2118.710 kb on - strandat 2118.710 kb on - strandat 2118.710 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,117,227 - +0.0
2,117,228 + +0.2
2,117,228 + -1.1
2,117,228 + +0.2
2,117,228 + -1.3
2,117,228 + -0.6
2,117,228 + +0.3
2,117,229 - +0.6
2,117,229 - +0.3
2,117,229 - -2.1
2,117,229 - -0.0
2,117,229 - -0.0
2,117,229 - +0.1
2,117,229 - +0.1
2,117,242 + +1.1
2,117,242 + -1.1
2,117,242 + -0.1
2,117,242 + -0.7
2,117,242 + -0.9
2,117,242 + +0.4
2,117,242 + +0.2
2,117,243 - +1.0
2,117,243 - -0.8
2,117,243 - +0.8
2,117,243 - -0.2
2,117,243 - +0.1
2,117,249 + +1.1
2,117,318 + A4249_RS10530 0.16 -0.5
2,117,319 - A4249_RS10530 0.16 +0.0
2,117,319 - A4249_RS10530 0.16 -0.0
2,117,319 - A4249_RS10530 0.16 -0.6
2,117,337 + A4249_RS10530 0.18 -0.6
2,117,337 + A4249_RS10530 0.18 +0.6
2,117,337 + A4249_RS10530 0.18 -0.1
2,117,338 - A4249_RS10530 0.18 -0.1
2,117,338 - A4249_RS10530 0.18 -0.5
2,117,517 + A4249_RS10530 0.38 +0.5
2,117,517 + A4249_RS10530 0.38 +0.6
2,117,518 - A4249_RS10530 0.38 -0.3
2,117,546 + A4249_RS10530 0.41 +0.9
2,117,546 + A4249_RS10530 0.41 -0.2
2,117,546 + A4249_RS10530 0.41 +1.3
2,117,547 - A4249_RS10530 0.41 -2.3
2,117,547 - A4249_RS10530 0.41 -0.7
2,117,547 - A4249_RS10530 0.41 -1.8
2,117,645 + A4249_RS10530 0.52 -0.5
2,117,645 + A4249_RS10530 0.52 +1.0
2,117,645 + A4249_RS10530 0.52 -1.0
2,117,645 + A4249_RS10530 0.52 -0.1
2,117,645 + A4249_RS10530 0.52 -1.1
2,117,645 + A4249_RS10530 0.52 -0.3
2,117,645 + A4249_RS10530 0.52 -0.8
2,117,646 - A4249_RS10530 0.52 +1.0
2,117,646 - A4249_RS10530 0.52 +0.0
2,117,646 - A4249_RS10530 0.52 -0.3
2,117,646 - A4249_RS10530 0.52 -0.1
2,117,646 - A4249_RS10530 0.52 +1.1
2,117,646 - A4249_RS10530 0.52 +0.3
2,117,646 - A4249_RS10530 0.52 -0.4
2,117,646 - A4249_RS10530 0.52 -0.3
2,117,646 - A4249_RS10530 0.52 -0.1
2,117,666 + A4249_RS10530 0.55 +0.1
2,117,735 + A4249_RS10530 0.62 -0.2
2,117,735 + A4249_RS10530 0.62 -2.5
2,117,963 + A4249_RS10530 0.88 -0.4
2,117,963 + A4249_RS10530 0.88 -1.2
2,117,963 + A4249_RS10530 0.88 -0.4
2,117,963 + A4249_RS10530 0.88 -0.3
2,117,963 + A4249_RS10530 0.88 -0.8
2,117,963 + A4249_RS10530 0.88 -0.4
2,117,964 - A4249_RS10530 0.88 +0.3
2,117,964 - A4249_RS10530 0.88 -0.9
2,117,964 - A4249_RS10530 0.88 -0.3
2,117,964 - A4249_RS10530 0.88 -0.8
2,117,964 - A4249_RS10530 0.88 -1.1
2,117,964 - A4249_RS10530 0.88 +1.0
2,117,964 - A4249_RS10530 0.88 +0.5
2,118,111 + -1.5
2,118,112 - -1.9
2,118,112 - -0.5
2,118,221 + A4249_RS10535 0.22 -0.9
2,118,222 - A4249_RS10535 0.22 -0.6
2,118,222 - A4249_RS10535 0.22 -0.9
2,118,222 - A4249_RS10535 0.22 -1.0
2,118,222 - A4249_RS10535 0.22 -0.0
2,118,413 + A4249_RS10535 0.81 -0.8
2,118,413 + A4249_RS10535 0.81 -0.0
2,118,413 + A4249_RS10535 0.81 -0.5
2,118,413 + A4249_RS10535 0.81 +1.3
2,118,413 + A4249_RS10535 0.81 -1.0
2,118,413 + A4249_RS10535 0.81 -3.1
2,118,413 + A4249_RS10535 0.81 +0.1
2,118,414 - A4249_RS10535 0.81 -0.7
2,118,414 - A4249_RS10535 0.81 -0.7
2,118,414 - A4249_RS10535 0.81 -0.4
2,118,414 - A4249_RS10535 0.81 -0.7
2,118,414 - A4249_RS10535 0.81 -1.7
2,118,414 - A4249_RS10535 0.81 +0.1
2,118,414 - A4249_RS10535 0.81 +0.2
2,118,414 - A4249_RS10535 0.81 +0.8
2,118,414 - A4249_RS10535 0.81 +1.0
2,118,414 - A4249_RS10535 0.81 -0.1
2,118,414 - A4249_RS10535 0.81 +0.5
2,118,414 - A4249_RS10535 0.81 -0.4
2,118,416 + A4249_RS10535 0.82 +0.0
2,118,416 + A4249_RS10535 0.82 -0.1
2,118,417 - A4249_RS10535 0.82 +0.1
2,118,422 + A4249_RS10535 0.84 +1.5
2,118,422 + A4249_RS10535 0.84 -0.2
2,118,422 + A4249_RS10535 0.84 -1.0
2,118,422 + A4249_RS10535 0.84 -0.3
2,118,422 + A4249_RS10535 0.84 +0.1
2,118,422 + A4249_RS10535 0.84 +1.1
2,118,423 - A4249_RS10535 0.84 -0.2
2,118,423 - A4249_RS10535 0.84 +0.3
2,118,423 - A4249_RS10535 0.84 -0.4
2,118,423 - A4249_RS10535 0.84 +0.0
2,118,592 + -0.3
2,118,592 + +0.8
2,118,593 - -0.6
2,118,593 - -0.9
2,118,709 + -0.4
2,118,709 + +0.9
2,118,709 + -0.1
2,118,710 - -0.1
2,118,710 - -0.0
2,118,710 - -0.2
2,118,710 - -0.4
2,118,710 - +0.1
2,118,710 - +0.1
2,118,710 - +0.2
2,118,710 - -0.3

Or see this region's nucleotide sequence