Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03360 and CA264_03365 are separated by 196 nucleotides CA264_03365 and CA264_03370 are separated by 10 nucleotides CA264_03370 and CA264_03375 are separated by 149 nucleotides
CA264_03360: CA264_03360 - hypothetical protein, at 787,276 to 788,832
_03360
CA264_03365: CA264_03365 - hypothetical protein, at 789,029 to 789,229
_03365
CA264_03370: CA264_03370 - hypothetical protein, at 789,240 to 789,671
_03370
CA264_03375: CA264_03375 - hypothetical protein, at 789,821 to 790,390
_03375
Position (kb) 789
790 Strain fitness (log2 ratio) -2
-1
0
1
2 at 788.103 kb on + strand, within CA264_03360 at 788.103 kb on + strand, within CA264_03360 at 788.103 kb on + strand, within CA264_03360 at 788.104 kb on - strand, within CA264_03360 at 788.106 kb on - strand, within CA264_03360 at 788.113 kb on + strand, within CA264_03360 at 788.113 kb on + strand, within CA264_03360 at 788.113 kb on + strand, within CA264_03360 at 788.114 kb on - strand, within CA264_03360 at 788.114 kb on - strand, within CA264_03360 at 788.114 kb on - strand, within CA264_03360 at 788.147 kb on + strand, within CA264_03360 at 788.147 kb on + strand, within CA264_03360 at 788.184 kb on + strand, within CA264_03360 at 788.388 kb on - strand, within CA264_03360 at 788.438 kb on + strand, within CA264_03360 at 788.439 kb on - strand, within CA264_03360 at 788.511 kb on + strand, within CA264_03360 at 788.567 kb on + strand, within CA264_03360 at 788.579 kb on + strand, within CA264_03360 at 788.729 kb on + strand at 788.821 kb on + strand at 788.843 kb on + strand at 788.874 kb on + strand at 788.918 kb on - strand at 788.918 kb on - strand at 788.979 kb on - strand at 788.997 kb on + strand at 789.012 kb on + strand at 789.015 kb on - strand at 789.027 kb on + strand at 789.161 kb on + strand, within CA264_03365 at 789.193 kb on + strand, within CA264_03365 at 789.197 kb on + strand, within CA264_03365 at 789.228 kb on - strand at 789.241 kb on + strand at 789.305 kb on + strand, within CA264_03370 at 789.305 kb on + strand, within CA264_03370 at 789.305 kb on + strand, within CA264_03370 at 789.333 kb on - strand, within CA264_03370 at 789.335 kb on - strand, within CA264_03370 at 789.337 kb on + strand, within CA264_03370 at 789.338 kb on - strand, within CA264_03370 at 789.338 kb on - strand, within CA264_03370 at 789.370 kb on + strand, within CA264_03370 at 789.370 kb on + strand, within CA264_03370 at 789.377 kb on - strand, within CA264_03370 at 789.583 kb on + strand, within CA264_03370 at 789.583 kb on + strand, within CA264_03370 at 789.588 kb on + strand, within CA264_03370 at 789.589 kb on - strand, within CA264_03370 at 789.589 kb on - strand, within CA264_03370 at 789.671 kb on + strand at 789.684 kb on + strand at 789.685 kb on - strand at 789.688 kb on + strand at 789.688 kb on + strand at 789.688 kb on + strand at 789.688 kb on + strand at 789.688 kb on + strand at 789.688 kb on + strand at 789.689 kb on - strand at 789.689 kb on - strand at 789.689 kb on - strand at 789.689 kb on - strand at 789.689 kb on - strand at 789.689 kb on - strand at 789.689 kb on - strand at 789.719 kb on - strand at 789.753 kb on - strand at 789.769 kb on + strand at 789.770 kb on - strand at 789.809 kb on + strand at 789.809 kb on + strand at 789.809 kb on + strand at 789.810 kb on - strand at 789.811 kb on + strand at 789.892 kb on + strand, within CA264_03375 at 789.893 kb on - strand, within CA264_03375 at 789.907 kb on - strand, within CA264_03375 at 789.907 kb on - strand, within CA264_03375 at 789.912 kb on - strand, within CA264_03375 at 789.913 kb on + strand, within CA264_03375 at 789.972 kb on + strand, within CA264_03375 at 789.973 kb on - strand, within CA264_03375 at 789.973 kb on - strand, within CA264_03375 at 789.996 kb on + strand, within CA264_03375 at 789.997 kb on - strand, within CA264_03375 at 790.213 kb on + strand, within CA264_03375 at 790.214 kb on - strand, within CA264_03375
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 788,103 + CA264_03360 0.53 -0.6 788,103 + CA264_03360 0.53 +1.4 788,103 + CA264_03360 0.53 +0.7 788,104 - CA264_03360 0.53 +2.5 788,106 - CA264_03360 0.53 +1.4 788,113 + CA264_03360 0.54 -0.5 788,113 + CA264_03360 0.54 -0.6 788,113 + CA264_03360 0.54 +0.2 788,114 - CA264_03360 0.54 -0.7 788,114 - CA264_03360 0.54 -0.7 788,114 - CA264_03360 0.54 +0.8 788,147 + CA264_03360 0.56 +0.1 788,147 + CA264_03360 0.56 +1.0 788,184 + CA264_03360 0.58 +0.4 788,388 - CA264_03360 0.71 +0.1 788,438 + CA264_03360 0.75 -0.4 788,439 - CA264_03360 0.75 -0.6 788,511 + CA264_03360 0.79 -0.8 788,567 + CA264_03360 0.83 -2.2 788,579 + CA264_03360 0.84 -0.4 788,729 + +0.9 788,821 + +1.0 788,843 + -0.1 788,874 + -2.0 788,918 - -0.0 788,918 - -0.1 788,979 - +0.1 788,997 + +0.2 789,012 + -0.5 789,015 - -0.1 789,027 + -1.0 789,161 + CA264_03365 0.66 +1.0 789,193 + CA264_03365 0.82 -0.5 789,197 + CA264_03365 0.84 -1.5 789,228 - +0.1 789,241 + +0.3 789,305 + CA264_03370 0.15 -0.3 789,305 + CA264_03370 0.15 -0.1 789,305 + CA264_03370 0.15 -0.5 789,333 - CA264_03370 0.22 -0.0 789,335 - CA264_03370 0.22 +0.1 789,337 + CA264_03370 0.22 -0.0 789,338 - CA264_03370 0.23 -0.2 789,338 - CA264_03370 0.23 -0.8 789,370 + CA264_03370 0.30 -0.0 789,370 + CA264_03370 0.30 -0.0 789,377 - CA264_03370 0.32 -0.2 789,583 + CA264_03370 0.79 -0.9 789,583 + CA264_03370 0.79 -0.1 789,588 + CA264_03370 0.81 -0.1 789,589 - CA264_03370 0.81 -0.3 789,589 - CA264_03370 0.81 -0.6 789,671 + +0.2 789,684 + +0.3 789,685 - -0.3 789,688 + -2.0 789,688 + +0.4 789,688 + -0.5 789,688 + +0.6 789,688 + -0.3 789,688 + -0.4 789,689 - +1.0 789,689 - -0.7 789,689 - +1.0 789,689 - +0.5 789,689 - +1.0 789,689 - +0.8 789,689 - -1.2 789,719 - -2.0 789,753 - -0.8 789,769 + +0.3 789,770 - -0.1 789,809 + +0.0 789,809 + -0.6 789,809 + -1.4 789,810 - -0.0 789,811 + +0.5 789,892 + CA264_03375 0.12 +0.4 789,893 - CA264_03375 0.13 -1.0 789,907 - CA264_03375 0.15 -1.1 789,907 - CA264_03375 0.15 -0.9 789,912 - CA264_03375 0.16 -1.1 789,913 + CA264_03375 0.16 -0.7 789,972 + CA264_03375 0.26 -0.0 789,973 - CA264_03375 0.27 -0.2 789,973 - CA264_03375 0.27 -1.4 789,996 + CA264_03375 0.31 -0.0 789,997 - CA264_03375 0.31 -0.4 790,213 + CA264_03375 0.69 -0.5 790,214 - CA264_03375 0.69 -0.2
Or see this region's nucleotide sequence