Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4504 and PfGW456L13_4505 are separated by 28 nucleotides PfGW456L13_4505 and PfGW456L13_4506 are separated by 4 nucleotides PfGW456L13_4506 and PfGW456L13_4507 are separated by 17 nucleotides
PfGW456L13_4504 - Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6), at 5,037,595 to 5,038,308
_4504
PfGW456L13_4505 - Metal-dependent hydrolases of the beta-lactamase superfamily I, at 5,038,337 to 5,039,095
_4505
PfGW456L13_4506 - Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor, at 5,039,100 to 5,040,215
_4506
PfGW456L13_4507 - 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7), at 5,040,233 to 5,041,111
_4507
Position (kb)
5039
5040
5041 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5038.326 kb on - strand at 5038.326 kb on - strand at 5038.326 kb on - strand at 5038.326 kb on - strand at 5038.326 kb on - strand at 5038.330 kb on - strand at 5038.330 kb on - strand at 5038.330 kb on - strand at 5038.330 kb on - strand at 5038.346 kb on - strand at 5038.576 kb on - strand, within PfGW456L13_4505 at 5038.672 kb on - strand, within PfGW456L13_4505 at 5038.726 kb on - strand, within PfGW456L13_4505 at 5038.726 kb on - strand, within PfGW456L13_4505 at 5038.829 kb on - strand, within PfGW456L13_4505 at 5038.829 kb on - strand, within PfGW456L13_4505 at 5038.882 kb on - strand, within PfGW456L13_4505 at 5038.882 kb on - strand, within PfGW456L13_4505 at 5039.025 kb on - strand at 5039.025 kb on - strand at 5039.025 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.029 kb on - strand at 5039.033 kb on - strand at 5039.033 kb on - strand at 5039.033 kb on - strand at 5039.033 kb on - strand at 5039.069 kb on - strand at 5039.096 kb on - strand at 5039.096 kb on - strand at 5039.096 kb on - strand at 5039.336 kb on - strand, within PfGW456L13_4506 at 5039.336 kb on - strand, within PfGW456L13_4506 at 5039.336 kb on - strand, within PfGW456L13_4506 at 5039.336 kb on - strand, within PfGW456L13_4506 at 5039.336 kb on - strand, within PfGW456L13_4506 at 5039.339 kb on - strand, within PfGW456L13_4506 at 5039.339 kb on - strand, within PfGW456L13_4506 at 5039.339 kb on - strand, within PfGW456L13_4506 at 5039.339 kb on - strand, within PfGW456L13_4506 at 5039.541 kb on - strand, within PfGW456L13_4506 at 5039.541 kb on - strand, within PfGW456L13_4506 at 5039.660 kb on - strand, within PfGW456L13_4506 at 5039.660 kb on - strand, within PfGW456L13_4506 at 5039.660 kb on - strand, within PfGW456L13_4506 at 5039.673 kb on - strand, within PfGW456L13_4506 at 5039.673 kb on - strand, within PfGW456L13_4506 at 5040.131 kb on - strand at 5040.177 kb on - strand at 5040.177 kb on - strand at 5040.223 kb on - strand at 5040.223 kb on - strand at 5040.223 kb on - strand at 5040.715 kb on - strand, within PfGW456L13_4507 at 5040.793 kb on - strand, within PfGW456L13_4507 at 5040.793 kb on - strand, within PfGW456L13_4507 at 5040.793 kb on - strand, within PfGW456L13_4507 at 5040.793 kb on - strand, within PfGW456L13_4507 at 5041.149 kb on - strand at 5041.179 kb on + strand at 5041.179 kb on + strand at 5041.179 kb on + strand at 5041.179 kb on + strand at 5041.179 kb on + strand at 5041.180 kb on - strand at 5041.180 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 5,038,326 - +0.8 5,038,326 - -1.0 5,038,326 - +0.6 5,038,326 - -1.1 5,038,326 - -2.2 5,038,330 - +0.1 5,038,330 - +0.4 5,038,330 - +0.2 5,038,330 - +0.2 5,038,346 - -2.0 5,038,576 - PfGW456L13_4505 0.31 -0.5 5,038,672 - PfGW456L13_4505 0.44 +0.4 5,038,726 - PfGW456L13_4505 0.51 -0.2 5,038,726 - PfGW456L13_4505 0.51 -0.5 5,038,829 - PfGW456L13_4505 0.65 -0.4 5,038,829 - PfGW456L13_4505 0.65 +0.8 5,038,882 - PfGW456L13_4505 0.72 -0.5 5,038,882 - PfGW456L13_4505 0.72 +1.0 5,039,025 - -0.7 5,039,025 - -0.2 5,039,025 - -1.5 5,039,029 - +0.7 5,039,029 - -0.3 5,039,029 - -1.4 5,039,029 - +0.6 5,039,029 - +0.1 5,039,029 - +0.0 5,039,029 - +1.2 5,039,029 - +0.3 5,039,029 - -0.9 5,039,029 - +1.1 5,039,029 - +0.4 5,039,029 - +0.6 5,039,033 - +0.3 5,039,033 - +0.6 5,039,033 - +0.0 5,039,033 - -1.1 5,039,069 - -0.5 5,039,096 - +0.6 5,039,096 - -0.3 5,039,096 - -0.2 5,039,336 - PfGW456L13_4506 0.21 -0.8 5,039,336 - PfGW456L13_4506 0.21 -1.4 5,039,336 - PfGW456L13_4506 0.21 -1.3 5,039,336 - PfGW456L13_4506 0.21 +0.5 5,039,336 - PfGW456L13_4506 0.21 +0.3 5,039,339 - PfGW456L13_4506 0.21 +0.1 5,039,339 - PfGW456L13_4506 0.21 -2.4 5,039,339 - PfGW456L13_4506 0.21 -2.8 5,039,339 - PfGW456L13_4506 0.21 -2.0 5,039,541 - PfGW456L13_4506 0.40 -1.5 5,039,541 - PfGW456L13_4506 0.40 -2.6 5,039,660 - PfGW456L13_4506 0.50 -0.4 5,039,660 - PfGW456L13_4506 0.50 -1.8 5,039,660 - PfGW456L13_4506 0.50 -1.0 5,039,673 - PfGW456L13_4506 0.51 -1.1 5,039,673 - PfGW456L13_4506 0.51 -1.3 5,040,131 - -2.8 5,040,177 - -1.9 5,040,177 - +1.2 5,040,223 - -0.4 5,040,223 - -2.0 5,040,223 - -0.3 5,040,715 - PfGW456L13_4507 0.55 +0.2 5,040,793 - PfGW456L13_4507 0.64 -2.6 5,040,793 - PfGW456L13_4507 0.64 +0.3 5,040,793 - PfGW456L13_4507 0.64 -2.1 5,040,793 - PfGW456L13_4507 0.64 -0.8 5,041,149 - -0.4 5,041,179 + +0.4 5,041,179 + -1.1 5,041,179 + +0.6 5,041,179 + -1.0 5,041,179 + -1.0 5,041,180 - -0.5 5,041,180 - +0.6
Or see this region's nucleotide sequence