Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4159 and PfGW456L13_4160 are separated by 396 nucleotides PfGW456L13_4160 and PfGW456L13_4161 are separated by 60 nucleotides PfGW456L13_4161 and PfGW456L13_4162 are separated by 4 nucleotides
PfGW456L13_4159 - Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 4,674,249 to 4,676,048
_4159
PfGW456L13_4160 - FIG00958237: hypothetical protein, at 4,676,445 to 4,676,723
_4160
PfGW456L13_4161 - 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase (EC 3.1.3.77), at 4,676,784 to 4,677,467
_4161
PfGW456L13_4162 - 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54), at 4,677,472 to 4,678,017
_4162
Position (kb)
4676
4677 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4675.687 kb on - strand, within PfGW456L13_4159 at 4675.687 kb on - strand, within PfGW456L13_4159 at 4675.687 kb on - strand, within PfGW456L13_4159 at 4675.712 kb on + strand, within PfGW456L13_4159 at 4675.712 kb on + strand, within PfGW456L13_4159 at 4675.713 kb on - strand, within PfGW456L13_4159 at 4675.874 kb on - strand at 4675.874 kb on - strand at 4675.884 kb on + strand at 4675.884 kb on + strand at 4675.884 kb on + strand at 4675.884 kb on + strand at 4675.884 kb on + strand at 4675.884 kb on + strand at 4676.060 kb on + strand at 4676.109 kb on + strand at 4676.109 kb on + strand at 4676.141 kb on + strand at 4676.141 kb on + strand at 4676.142 kb on - strand at 4676.142 kb on - strand at 4676.142 kb on - strand at 4676.142 kb on - strand at 4676.142 kb on - strand at 4676.163 kb on + strand at 4676.188 kb on + strand at 4676.189 kb on - strand at 4676.189 kb on - strand at 4676.408 kb on + strand at 4676.408 kb on + strand at 4676.408 kb on + strand at 4676.409 kb on - strand at 4676.577 kb on + strand, within PfGW456L13_4160 at 4676.578 kb on - strand, within PfGW456L13_4160 at 4676.709 kb on + strand at 4676.709 kb on + strand at 4676.709 kb on + strand at 4676.709 kb on + strand at 4676.709 kb on + strand at 4676.709 kb on + strand at 4676.710 kb on - strand at 4677.657 kb on - strand, within PfGW456L13_4162 at 4677.706 kb on + strand, within PfGW456L13_4162 at 4677.707 kb on - strand, within PfGW456L13_4162 at 4677.707 kb on - strand, within PfGW456L13_4162
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 4,675,687 - PfGW456L13_4159 0.80 +0.2 4,675,687 - PfGW456L13_4159 0.80 -1.1 4,675,687 - PfGW456L13_4159 0.80 +0.3 4,675,712 + PfGW456L13_4159 0.81 -1.7 4,675,712 + PfGW456L13_4159 0.81 -0.3 4,675,713 - PfGW456L13_4159 0.81 -0.2 4,675,874 - -0.4 4,675,874 - +1.9 4,675,884 + -0.1 4,675,884 + -1.0 4,675,884 + +0.3 4,675,884 + +1.0 4,675,884 + +1.0 4,675,884 + -2.3 4,676,060 + -1.0 4,676,109 + +0.3 4,676,109 + +0.6 4,676,141 + +0.1 4,676,141 + -0.6 4,676,142 - +0.6 4,676,142 - +0.3 4,676,142 - -0.4 4,676,142 - +0.7 4,676,142 - -0.0 4,676,163 + +0.7 4,676,188 + +0.3 4,676,189 - +0.6 4,676,189 - -1.0 4,676,408 + -0.1 4,676,408 + -0.3 4,676,408 + +0.8 4,676,409 - +0.4 4,676,577 + PfGW456L13_4160 0.47 -1.6 4,676,578 - PfGW456L13_4160 0.48 -0.3 4,676,709 + +1.2 4,676,709 + +0.8 4,676,709 + +1.0 4,676,709 + -3.7 4,676,709 + +0.2 4,676,709 + +1.3 4,676,710 - +0.2 4,677,657 - PfGW456L13_4162 0.34 -0.4 4,677,706 + PfGW456L13_4162 0.43 -1.2 4,677,707 - PfGW456L13_4162 0.43 +1.6 4,677,707 - PfGW456L13_4162 0.43 -1.6
Or see this region's nucleotide sequence