Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_230 and PfGW456L13_231 are separated by 48 nucleotides PfGW456L13_231 and PfGW456L13_232 are separated by 73 nucleotides PfGW456L13_232 and PfGW456L13_233 are separated by 129 nucleotides
PfGW456L13_230 - Potassium efflux system KefA protein / Small-conductance mechanosensitive channel, at 273,172 to 276,540
_230
PfGW456L13_231 - Selenoprotein O and cysteine-containing homologs, at 276,589 to 278,052
_231
PfGW456L13_232 - Thioredoxin, at 278,126 to 278,560
_232
PfGW456L13_233 - Chromosome (plasmid) partitioning protein ParA, at 278,690 to 279,460
_233
Position (kb) 276
277
278
279 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 275.594 kb on - strand, within PfGW456L13_230 at 275.620 kb on + strand, within PfGW456L13_230 at 275.620 kb on + strand, within PfGW456L13_230 at 275.621 kb on - strand, within PfGW456L13_230 at 275.809 kb on + strand, within PfGW456L13_230 at 275.809 kb on + strand, within PfGW456L13_230 at 275.809 kb on + strand, within PfGW456L13_230 at 275.810 kb on - strand, within PfGW456L13_230 at 275.810 kb on - strand, within PfGW456L13_230 at 275.810 kb on - strand, within PfGW456L13_230 at 275.810 kb on - strand, within PfGW456L13_230 at 275.810 kb on - strand, within PfGW456L13_230 at 275.858 kb on + strand, within PfGW456L13_230 at 275.858 kb on + strand, within PfGW456L13_230 at 275.859 kb on - strand, within PfGW456L13_230 at 276.259 kb on + strand at 276.259 kb on + strand at 276.259 kb on + strand at 276.259 kb on + strand at 276.260 kb on - strand at 276.418 kb on + strand at 276.445 kb on + strand at 276.445 kb on + strand at 276.445 kb on + strand at 276.446 kb on - strand at 276.446 kb on - strand at 276.446 kb on - strand at 276.446 kb on - strand at 276.446 kb on - strand at 276.446 kb on - strand at 276.679 kb on - strand at 276.841 kb on + strand, within PfGW456L13_231 at 276.841 kb on + strand, within PfGW456L13_231 at 276.841 kb on + strand, within PfGW456L13_231 at 276.842 kb on - strand, within PfGW456L13_231 at 276.842 kb on - strand, within PfGW456L13_231 at 276.842 kb on - strand, within PfGW456L13_231 at 276.889 kb on + strand, within PfGW456L13_231 at 276.889 kb on + strand, within PfGW456L13_231 at 276.890 kb on - strand, within PfGW456L13_231 at 276.890 kb on - strand, within PfGW456L13_231 at 276.890 kb on - strand, within PfGW456L13_231 at 276.890 kb on - strand, within PfGW456L13_231 at 276.890 kb on - strand, within PfGW456L13_231 at 277.030 kb on - strand, within PfGW456L13_231 at 277.056 kb on - strand, within PfGW456L13_231 at 277.153 kb on + strand, within PfGW456L13_231 at 277.154 kb on - strand, within PfGW456L13_231 at 277.160 kb on - strand, within PfGW456L13_231 at 277.162 kb on + strand, within PfGW456L13_231 at 277.162 kb on + strand, within PfGW456L13_231 at 277.162 kb on + strand, within PfGW456L13_231 at 277.163 kb on - strand, within PfGW456L13_231 at 277.163 kb on - strand, within PfGW456L13_231 at 277.163 kb on - strand, within PfGW456L13_231 at 277.312 kb on + strand, within PfGW456L13_231 at 277.312 kb on + strand, within PfGW456L13_231 at 277.312 kb on + strand, within PfGW456L13_231 at 277.313 kb on - strand, within PfGW456L13_231 at 277.313 kb on - strand, within PfGW456L13_231 at 277.556 kb on - strand, within PfGW456L13_231 at 277.579 kb on + strand, within PfGW456L13_231 at 277.579 kb on + strand, within PfGW456L13_231 at 277.655 kb on + strand, within PfGW456L13_231 at 277.655 kb on + strand, within PfGW456L13_231 at 277.655 kb on + strand, within PfGW456L13_231 at 277.684 kb on + strand, within PfGW456L13_231 at 277.684 kb on + strand, within PfGW456L13_231 at 277.684 kb on + strand, within PfGW456L13_231 at 277.685 kb on - strand, within PfGW456L13_231 at 277.792 kb on + strand, within PfGW456L13_231 at 277.792 kb on + strand, within PfGW456L13_231 at 277.792 kb on + strand, within PfGW456L13_231 at 277.792 kb on + strand, within PfGW456L13_231 at 277.793 kb on - strand, within PfGW456L13_231 at 277.793 kb on - strand, within PfGW456L13_231 at 277.793 kb on - strand, within PfGW456L13_231 at 277.793 kb on - strand, within PfGW456L13_231 at 277.870 kb on + strand, within PfGW456L13_231 at 277.870 kb on + strand, within PfGW456L13_231 at 277.870 kb on + strand, within PfGW456L13_231 at 277.870 kb on + strand, within PfGW456L13_231 at 277.870 kb on + strand, within PfGW456L13_231 at 277.870 kb on + strand, within PfGW456L13_231 at 277.870 kb on + strand, within PfGW456L13_231 at 277.870 kb on + strand, within PfGW456L13_231 at 277.870 kb on + strand, within PfGW456L13_231 at 277.870 kb on + strand, within PfGW456L13_231 at 277.871 kb on - strand, within PfGW456L13_231 at 277.871 kb on - strand, within PfGW456L13_231 at 277.871 kb on - strand, within PfGW456L13_231 at 277.871 kb on - strand, within PfGW456L13_231 at 277.885 kb on + strand, within PfGW456L13_231 at 277.885 kb on + strand, within PfGW456L13_231 at 277.886 kb on - strand, within PfGW456L13_231 at 277.886 kb on - strand, within PfGW456L13_231 at 277.886 kb on - strand, within PfGW456L13_231 at 277.886 kb on - strand, within PfGW456L13_231 at 277.928 kb on - strand at 277.996 kb on + strand at 277.996 kb on + strand at 277.997 kb on - strand at 277.997 kb on - strand at 278.092 kb on + strand at 278.093 kb on - strand at 278.093 kb on - strand at 278.270 kb on + strand, within PfGW456L13_232 at 278.270 kb on + strand, within PfGW456L13_232 at 278.545 kb on + strand at 278.545 kb on + strand at 278.633 kb on + strand at 278.633 kb on + strand at 278.633 kb on + strand at 278.633 kb on + strand at 278.633 kb on + strand at 278.634 kb on - strand at 278.771 kb on - strand, within PfGW456L13_233 at 278.814 kb on + strand, within PfGW456L13_233 at 278.814 kb on + strand, within PfGW456L13_233 at 278.815 kb on - strand, within PfGW456L13_233 at 278.971 kb on - strand, within PfGW456L13_233
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 275,594 - PfGW456L13_230 0.72 -0.7 275,620 + PfGW456L13_230 0.73 +0.0 275,620 + PfGW456L13_230 0.73 +1.0 275,621 - PfGW456L13_230 0.73 +0.4 275,809 + PfGW456L13_230 0.78 +0.6 275,809 + PfGW456L13_230 0.78 +1.0 275,809 + PfGW456L13_230 0.78 +0.2 275,810 - PfGW456L13_230 0.78 +0.2 275,810 - PfGW456L13_230 0.78 -1.6 275,810 - PfGW456L13_230 0.78 -2.7 275,810 - PfGW456L13_230 0.78 -1.1 275,810 - PfGW456L13_230 0.78 -2.8 275,858 + PfGW456L13_230 0.80 -1.5 275,858 + PfGW456L13_230 0.80 -0.3 275,859 - PfGW456L13_230 0.80 -1.4 276,259 + -1.8 276,259 + -0.6 276,259 + +0.7 276,259 + -0.3 276,260 - -2.2 276,418 + +1.7 276,445 + -1.4 276,445 + -1.0 276,445 + -1.7 276,446 - -0.5 276,446 - +0.0 276,446 - +0.5 276,446 - +0.5 276,446 - +0.3 276,446 - -2.1 276,679 - -0.8 276,841 + PfGW456L13_231 0.17 -0.3 276,841 + PfGW456L13_231 0.17 +0.7 276,841 + PfGW456L13_231 0.17 +0.8 276,842 - PfGW456L13_231 0.17 +2.0 276,842 - PfGW456L13_231 0.17 +0.6 276,842 - PfGW456L13_231 0.17 -1.3 276,889 + PfGW456L13_231 0.20 +1.6 276,889 + PfGW456L13_231 0.20 +1.1 276,890 - PfGW456L13_231 0.21 -2.5 276,890 - PfGW456L13_231 0.21 +1.1 276,890 - PfGW456L13_231 0.21 -0.5 276,890 - PfGW456L13_231 0.21 -1.1 276,890 - PfGW456L13_231 0.21 -0.7 277,030 - PfGW456L13_231 0.30 +0.9 277,056 - PfGW456L13_231 0.32 -1.7 277,153 + PfGW456L13_231 0.39 +0.9 277,154 - PfGW456L13_231 0.39 -0.2 277,160 - PfGW456L13_231 0.39 -1.9 277,162 + PfGW456L13_231 0.39 -1.1 277,162 + PfGW456L13_231 0.39 -1.4 277,162 + PfGW456L13_231 0.39 +0.5 277,163 - PfGW456L13_231 0.39 -0.5 277,163 - PfGW456L13_231 0.39 -0.5 277,163 - PfGW456L13_231 0.39 -0.1 277,312 + PfGW456L13_231 0.49 -1.9 277,312 + PfGW456L13_231 0.49 +0.3 277,312 + PfGW456L13_231 0.49 +0.3 277,313 - PfGW456L13_231 0.49 -0.2 277,313 - PfGW456L13_231 0.49 -0.7 277,556 - PfGW456L13_231 0.66 +0.1 277,579 + PfGW456L13_231 0.68 -3.4 277,579 + PfGW456L13_231 0.68 +1.5 277,655 + PfGW456L13_231 0.73 -0.6 277,655 + PfGW456L13_231 0.73 -0.5 277,655 + PfGW456L13_231 0.73 -1.4 277,684 + PfGW456L13_231 0.75 +0.3 277,684 + PfGW456L13_231 0.75 -0.1 277,684 + PfGW456L13_231 0.75 -1.5 277,685 - PfGW456L13_231 0.75 +0.2 277,792 + PfGW456L13_231 0.82 -0.7 277,792 + PfGW456L13_231 0.82 -2.5 277,792 + PfGW456L13_231 0.82 +0.1 277,792 + PfGW456L13_231 0.82 +0.9 277,793 - PfGW456L13_231 0.82 -0.6 277,793 - PfGW456L13_231 0.82 +0.3 277,793 - PfGW456L13_231 0.82 -0.6 277,793 - PfGW456L13_231 0.82 -0.0 277,870 + PfGW456L13_231 0.88 -0.2 277,870 + PfGW456L13_231 0.88 +0.7 277,870 + PfGW456L13_231 0.88 -1.4 277,870 + PfGW456L13_231 0.88 -1.1 277,870 + PfGW456L13_231 0.88 -1.4 277,870 + PfGW456L13_231 0.88 -1.2 277,870 + PfGW456L13_231 0.88 -1.7 277,870 + PfGW456L13_231 0.88 -1.4 277,870 + PfGW456L13_231 0.88 +0.5 277,870 + PfGW456L13_231 0.88 +1.3 277,871 - PfGW456L13_231 0.88 +0.1 277,871 - PfGW456L13_231 0.88 +0.9 277,871 - PfGW456L13_231 0.88 -0.1 277,871 - PfGW456L13_231 0.88 +1.2 277,885 + PfGW456L13_231 0.89 -0.6 277,885 + PfGW456L13_231 0.89 +0.0 277,886 - PfGW456L13_231 0.89 -0.1 277,886 - PfGW456L13_231 0.89 -0.6 277,886 - PfGW456L13_231 0.89 -1.1 277,886 - PfGW456L13_231 0.89 +1.3 277,928 - +0.7 277,996 + -0.9 277,996 + +0.2 277,997 - +0.9 277,997 - -0.4 278,092 + +1.1 278,093 - -2.1 278,093 - -0.3 278,270 + PfGW456L13_232 0.33 +0.1 278,270 + PfGW456L13_232 0.33 -1.5 278,545 + -0.7 278,545 + +0.1 278,633 + +2.5 278,633 + -0.0 278,633 + -0.7 278,633 + -0.6 278,633 + -0.5 278,634 - +1.7 278,771 - PfGW456L13_233 0.11 +0.9 278,814 + PfGW456L13_233 0.16 +0.5 278,814 + PfGW456L13_233 0.16 -2.2 278,815 - PfGW456L13_233 0.16 +0.2 278,971 - PfGW456L13_233 0.36 -1.9
Or see this region's nucleotide sequence