Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27500 and AO356_27505 are separated by 193 nucleotides AO356_27505 and AO356_27510 are separated by 58 nucleotides AO356_27510 and AO356_27515 are separated by 215 nucleotides
AO356_27500: AO356_27500 - amino acid permease, at 6,267,358 to 6,268,806
_27500
AO356_27505: AO356_27505 - transcriptional regulator, at 6,269,000 to 6,269,740
_27505
AO356_27510: AO356_27510 - AraC family transcriptional regulator, at 6,269,799 to 6,270,767
_27510
AO356_27515: AO356_27515 - 4-aminobutyrate aminotransferase, at 6,270,983 to 6,272,356
_27515
Position (kb)
6269
6270
6271 Strain fitness (log2 ratio)
-1
0
1 at 6268.799 kb on - strand at 6268.821 kb on - strand at 6268.825 kb on + strand at 6268.825 kb on + strand at 6268.825 kb on + strand at 6268.826 kb on - strand at 6268.826 kb on - strand at 6268.842 kb on - strand at 6268.914 kb on + strand at 6269.001 kb on + strand at 6269.061 kb on + strand at 6269.061 kb on + strand at 6269.290 kb on - strand, within AO356_27505 at 6269.290 kb on - strand, within AO356_27505 at 6269.320 kb on - strand, within AO356_27505 at 6269.523 kb on + strand, within AO356_27505 at 6269.523 kb on + strand, within AO356_27505 at 6269.524 kb on - strand, within AO356_27505 at 6269.897 kb on - strand, within AO356_27510 at 6269.996 kb on - strand, within AO356_27510 at 6269.996 kb on - strand, within AO356_27510 at 6270.139 kb on + strand, within AO356_27510 at 6270.140 kb on - strand, within AO356_27510 at 6270.140 kb on - strand, within AO356_27510 at 6270.161 kb on + strand, within AO356_27510 at 6270.425 kb on + strand, within AO356_27510 at 6270.663 kb on - strand, within AO356_27510 at 6270.691 kb on + strand at 6270.691 kb on + strand at 6270.919 kb on + strand at 6271.034 kb on - strand at 6271.178 kb on + strand, within AO356_27515 at 6271.178 kb on + strand, within AO356_27515 at 6271.178 kb on + strand, within AO356_27515 at 6271.178 kb on + strand, within AO356_27515 at 6271.179 kb on - strand, within AO356_27515 at 6271.363 kb on + strand, within AO356_27515 at 6271.363 kb on + strand, within AO356_27515 at 6271.363 kb on + strand, within AO356_27515 at 6271.364 kb on - strand, within AO356_27515 at 6271.364 kb on - strand, within AO356_27515 at 6271.565 kb on + strand, within AO356_27515 at 6271.565 kb on + strand, within AO356_27515
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 6,268,799 - -0.1 6,268,821 - -1.5 6,268,825 + -0.7 6,268,825 + +0.2 6,268,825 + +0.2 6,268,826 - -0.4 6,268,826 - -0.4 6,268,842 - +0.5 6,268,914 + +0.1 6,269,001 + -0.8 6,269,061 + +0.1 6,269,061 + +0.4 6,269,290 - AO356_27505 0.39 +1.0 6,269,290 - AO356_27505 0.39 +0.8 6,269,320 - AO356_27505 0.43 -0.0 6,269,523 + AO356_27505 0.71 -0.3 6,269,523 + AO356_27505 0.71 -0.1 6,269,524 - AO356_27505 0.71 +0.6 6,269,897 - AO356_27510 0.10 +0.1 6,269,996 - AO356_27510 0.20 -0.0 6,269,996 - AO356_27510 0.20 -0.0 6,270,139 + AO356_27510 0.35 -0.4 6,270,140 - AO356_27510 0.35 +0.1 6,270,140 - AO356_27510 0.35 -1.2 6,270,161 + AO356_27510 0.37 +1.6 6,270,425 + AO356_27510 0.65 -0.1 6,270,663 - AO356_27510 0.89 +0.8 6,270,691 + -0.6 6,270,691 + +0.6 6,270,919 + -0.2 6,271,034 - -0.5 6,271,178 + AO356_27515 0.14 +1.0 6,271,178 + AO356_27515 0.14 +0.4 6,271,178 + AO356_27515 0.14 -0.1 6,271,178 + AO356_27515 0.14 -0.1 6,271,179 - AO356_27515 0.14 +0.3 6,271,363 + AO356_27515 0.28 -0.1 6,271,363 + AO356_27515 0.28 +0.7 6,271,363 + AO356_27515 0.28 +0.3 6,271,364 - AO356_27515 0.28 -0.6 6,271,364 - AO356_27515 0.28 -1.6 6,271,565 + AO356_27515 0.42 +0.3 6,271,565 + AO356_27515 0.42 +0.6
Or see this region's nucleotide sequence