Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS24010 and EX31_RS24015 are separated by 603 nucleotides EX31_RS24015 and EX31_RS24020 are separated by 11 nucleotides
EX31_RS24010: EX31_RS24010 - GNAT family N-acetyltransferase, at 569,151 to 569,687
_RS24010
EX31_RS24015: EX31_RS24015 - ABC transporter permease, at 570,291 to 571,286
_RS24015
EX31_RS24020: EX31_RS24020 - ATP-binding cassette domain-containing protein, at 571,298 to 572,779
_RS24020
Position (kb) 570
571
572 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 569.320 kb on + strand, within EX31_RS24010 at 569.320 kb on + strand, within EX31_RS24010 at 569.320 kb on + strand, within EX31_RS24010 at 569.531 kb on + strand, within EX31_RS24010 at 569.531 kb on + strand, within EX31_RS24010 at 569.583 kb on + strand, within EX31_RS24010 at 569.626 kb on - strand, within EX31_RS24010 at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.670 kb on + strand at 569.671 kb on - strand at 569.671 kb on - strand at 569.671 kb on - strand at 569.671 kb on - strand at 569.671 kb on - strand at 569.671 kb on - strand at 569.671 kb on - strand at 569.672 kb on + strand at 569.672 kb on + strand at 569.672 kb on + strand at 569.672 kb on + strand at 569.673 kb on - strand at 569.673 kb on - strand at 569.673 kb on - strand at 570.158 kb on - strand at 570.274 kb on + strand at 570.275 kb on - strand at 570.276 kb on + strand at 570.276 kb on + strand at 570.277 kb on - strand at 570.305 kb on + strand at 570.305 kb on + strand at 570.305 kb on + strand at 570.306 kb on - strand at 570.306 kb on - strand at 570.307 kb on + strand at 570.307 kb on + strand at 570.307 kb on + strand at 570.307 kb on + strand at 570.307 kb on + strand at 570.307 kb on + strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.308 kb on - strand at 570.337 kb on - strand at 570.361 kb on + strand at 570.361 kb on + strand at 570.362 kb on - strand at 570.364 kb on + strand at 570.365 kb on - strand at 570.440 kb on + strand, within EX31_RS24015 at 570.441 kb on - strand, within EX31_RS24015 at 570.441 kb on - strand, within EX31_RS24015 at 570.474 kb on - strand, within EX31_RS24015 at 570.476 kb on - strand, within EX31_RS24015 at 570.589 kb on + strand, within EX31_RS24015 at 570.590 kb on - strand, within EX31_RS24015 at 570.590 kb on - strand, within EX31_RS24015 at 570.661 kb on + strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.662 kb on - strand, within EX31_RS24015 at 570.693 kb on - strand, within EX31_RS24015 at 570.693 kb on - strand, within EX31_RS24015 at 570.693 kb on - strand, within EX31_RS24015 at 570.807 kb on + strand, within EX31_RS24015 at 570.808 kb on - strand, within EX31_RS24015 at 570.808 kb on - strand, within EX31_RS24015 at 570.836 kb on - strand, within EX31_RS24015 at 570.841 kb on + strand, within EX31_RS24015 at 570.841 kb on + strand, within EX31_RS24015 at 570.841 kb on + strand, within EX31_RS24015 at 570.841 kb on + strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.842 kb on - strand, within EX31_RS24015 at 570.947 kb on + strand, within EX31_RS24015 at 570.965 kb on + strand, within EX31_RS24015 at 570.965 kb on + strand, within EX31_RS24015 at 570.966 kb on - strand, within EX31_RS24015 at 571.053 kb on + strand, within EX31_RS24015 at 571.160 kb on + strand, within EX31_RS24015 at 571.161 kb on - strand, within EX31_RS24015 at 571.220 kb on + strand at 571.220 kb on + strand at 571.220 kb on + strand at 571.221 kb on - strand at 571.221 kb on - strand at 571.221 kb on - strand at 571.221 kb on - strand at 571.324 kb on - strand at 571.324 kb on - strand at 571.324 kb on - strand at 571.328 kb on + strand at 571.328 kb on + strand at 571.329 kb on - strand at 571.329 kb on - strand at 571.329 kb on - strand at 571.331 kb on + strand at 571.332 kb on - strand at 571.389 kb on - strand at 571.389 kb on - strand at 571.443 kb on + strand at 571.443 kb on + strand at 571.443 kb on + strand at 571.443 kb on + strand at 571.444 kb on - strand at 571.444 kb on - strand at 571.447 kb on + strand, within EX31_RS24020 at 571.448 kb on - strand, within EX31_RS24020 at 571.646 kb on + strand, within EX31_RS24020 at 571.647 kb on - strand, within EX31_RS24020 at 571.657 kb on + strand, within EX31_RS24020 at 571.796 kb on + strand, within EX31_RS24020 at 571.796 kb on + strand, within EX31_RS24020 at 571.796 kb on + strand, within EX31_RS24020 at 571.796 kb on + strand, within EX31_RS24020 at 571.797 kb on - strand, within EX31_RS24020 at 571.872 kb on - strand, within EX31_RS24020 at 571.970 kb on + strand, within EX31_RS24020 at 571.970 kb on + strand, within EX31_RS24020 at 572.018 kb on + strand, within EX31_RS24020 at 572.062 kb on + strand, within EX31_RS24020 at 572.063 kb on - strand, within EX31_RS24020 at 572.164 kb on + strand, within EX31_RS24020 at 572.165 kb on - strand, within EX31_RS24020 at 572.165 kb on - strand, within EX31_RS24020 at 572.206 kb on + strand, within EX31_RS24020 at 572.206 kb on + strand, within EX31_RS24020 at 572.207 kb on - strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.210 kb on + strand, within EX31_RS24020 at 572.211 kb on - strand, within EX31_RS24020
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 569,320 + EX31_RS24010 0.31 -1.5 569,320 + EX31_RS24010 0.31 +0.7 569,320 + EX31_RS24010 0.31 +0.6 569,531 + EX31_RS24010 0.71 -0.1 569,531 + EX31_RS24010 0.71 +1.0 569,583 + EX31_RS24010 0.80 +0.0 569,626 - EX31_RS24010 0.88 -0.1 569,670 + -0.9 569,670 + +0.6 569,670 + -1.6 569,670 + +0.1 569,670 + -0.4 569,670 + +0.6 569,670 + +0.2 569,670 + +2.1 569,670 + +0.6 569,670 + -1.1 569,670 + +0.6 569,670 + -0.5 569,670 + +1.3 569,670 + -1.0 569,670 + +1.9 569,670 + -0.1 569,670 + +1.6 569,671 - -0.7 569,671 - -0.7 569,671 - -0.7 569,671 - -0.5 569,671 - +0.9 569,671 - +2.2 569,671 - +1.2 569,672 + +1.5 569,672 + +0.4 569,672 + -1.7 569,672 + +0.3 569,673 - -0.7 569,673 - +0.1 569,673 - -1.1 570,158 - +0.1 570,274 + -2.0 570,275 - +1.4 570,276 + -1.8 570,276 + -0.6 570,277 - -1.1 570,305 + +1.7 570,305 + +2.8 570,305 + -2.8 570,306 - +1.2 570,306 - +1.0 570,307 + +0.3 570,307 + +0.9 570,307 + +0.9 570,307 + -0.5 570,307 + +0.9 570,307 + -0.1 570,308 - +0.4 570,308 - -1.1 570,308 - +0.1 570,308 - -0.1 570,308 - +2.1 570,308 - +0.9 570,308 - -0.7 570,308 - +2.4 570,308 - +1.3 570,308 - +1.9 570,308 - +2.3 570,308 - -1.0 570,308 - +0.7 570,308 - +2.9 570,337 - +1.3 570,361 + -0.7 570,361 + +0.0 570,362 - -1.5 570,364 + -1.1 570,365 - -0.4 570,440 + EX31_RS24015 0.15 -0.7 570,441 - EX31_RS24015 0.15 -0.6 570,441 - EX31_RS24015 0.15 -1.5 570,474 - EX31_RS24015 0.18 -2.3 570,476 - EX31_RS24015 0.19 +0.5 570,589 + EX31_RS24015 0.30 -2.0 570,590 - EX31_RS24015 0.30 +0.1 570,590 - EX31_RS24015 0.30 -1.3 570,661 + EX31_RS24015 0.37 +0.3 570,662 - EX31_RS24015 0.37 +1.1 570,662 - EX31_RS24015 0.37 +0.2 570,662 - EX31_RS24015 0.37 +1.6 570,662 - EX31_RS24015 0.37 +0.7 570,662 - EX31_RS24015 0.37 +1.5 570,662 - EX31_RS24015 0.37 -1.5 570,662 - EX31_RS24015 0.37 +0.0 570,662 - EX31_RS24015 0.37 +0.4 570,693 - EX31_RS24015 0.40 +0.4 570,693 - EX31_RS24015 0.40 +0.0 570,693 - EX31_RS24015 0.40 +1.2 570,807 + EX31_RS24015 0.52 +0.9 570,808 - EX31_RS24015 0.52 -0.7 570,808 - EX31_RS24015 0.52 -0.7 570,836 - EX31_RS24015 0.55 +0.4 570,841 + EX31_RS24015 0.55 +0.9 570,841 + EX31_RS24015 0.55 +1.7 570,841 + EX31_RS24015 0.55 +0.3 570,841 + EX31_RS24015 0.55 +0.0 570,842 - EX31_RS24015 0.55 -0.2 570,842 - EX31_RS24015 0.55 -0.5 570,842 - EX31_RS24015 0.55 +1.4 570,842 - EX31_RS24015 0.55 -1.3 570,842 - EX31_RS24015 0.55 -0.1 570,842 - EX31_RS24015 0.55 -0.0 570,842 - EX31_RS24015 0.55 -0.7 570,842 - EX31_RS24015 0.55 -1.3 570,842 - EX31_RS24015 0.55 +1.5 570,947 + EX31_RS24015 0.66 +0.6 570,965 + EX31_RS24015 0.68 +0.5 570,965 + EX31_RS24015 0.68 +0.4 570,966 - EX31_RS24015 0.68 -0.5 571,053 + EX31_RS24015 0.77 +0.9 571,160 + EX31_RS24015 0.87 +0.4 571,161 - EX31_RS24015 0.87 -1.0 571,220 + +0.3 571,220 + +0.9 571,220 + +1.9 571,221 - +0.0 571,221 - +2.3 571,221 - -1.7 571,221 - +1.4 571,324 - -1.6 571,324 - -1.5 571,324 - +0.7 571,328 + +0.9 571,328 + +0.3 571,329 - +0.4 571,329 - -0.3 571,329 - +1.6 571,331 + -1.5 571,332 - -2.7 571,389 - +1.2 571,389 - +0.5 571,443 + -1.3 571,443 + +0.9 571,443 + -0.1 571,443 + -1.7 571,444 - +0.9 571,444 - +1.1 571,447 + EX31_RS24020 0.10 +1.2 571,448 - EX31_RS24020 0.10 -0.1 571,646 + EX31_RS24020 0.23 -2.1 571,647 - EX31_RS24020 0.24 +0.2 571,657 + EX31_RS24020 0.24 +0.1 571,796 + EX31_RS24020 0.34 +1.9 571,796 + EX31_RS24020 0.34 -1.1 571,796 + EX31_RS24020 0.34 -3.2 571,796 + EX31_RS24020 0.34 -2.3 571,797 - EX31_RS24020 0.34 -0.4 571,872 - EX31_RS24020 0.39 -0.1 571,970 + EX31_RS24020 0.45 +1.0 571,970 + EX31_RS24020 0.45 -1.1 572,018 + EX31_RS24020 0.49 +1.7 572,062 + EX31_RS24020 0.52 +3.0 572,063 - EX31_RS24020 0.52 +0.9 572,164 + EX31_RS24020 0.58 -1.1 572,165 - EX31_RS24020 0.59 -1.1 572,165 - EX31_RS24020 0.59 -2.3 572,206 + EX31_RS24020 0.61 -1.1 572,206 + EX31_RS24020 0.61 -3.2 572,207 - EX31_RS24020 0.61 +0.4 572,210 + EX31_RS24020 0.62 -0.1 572,210 + EX31_RS24020 0.62 -0.1 572,210 + EX31_RS24020 0.62 +0.0 572,210 + EX31_RS24020 0.62 +0.6 572,210 + EX31_RS24020 0.62 -0.5 572,211 - EX31_RS24020 0.62 +0.3
Or see this region's nucleotide sequence