Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11415

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
2,587,163	+				+0.9
2,587,164	-				+0.4
2,587,223	+				-0.9
2,587,239	+				-2.6
2,587,271	+				-2.1
2,587,271	+				-2.2
2,587,271	+				-1.7
2,587,271	+				-1.3
2,587,271	+				-1.6
2,587,271	+				-1.1
2,587,271	+				-0.3
2,587,272	-				-0.1
2,587,272	-				+0.2
2,587,272	-				+2.6
2,587,312	+				-0.8
2,587,313	-				-2.8
2,587,316	+				-2.0
2,587,316	+				-0.3
2,587,316	+				-0.7
2,587,316	+				+1.6
2,587,316	+				-3.2
2,587,316	+				-0.8
2,587,317	-				-0.2
2,587,317	-				-1.0
2,587,317	-				-1.8
2,587,317	-				-0.3
2,587,317	-				-2.7
2,587,317	-				-0.9
2,587,361	+				-0.8
2,587,361	+				-1.0
2,587,361	+				-0.9
2,587,361	+				-0.5
2,587,362	-				-0.8
2,587,362	-				-0.4
2,587,372	-				-1.8
2,587,596	-		AO356_11410	0.79	-0.0
2,587,596	-		AO356_11410	0.79	-0.8
2,587,702	+				-2.4
2,587,702	+				-0.7
2,587,702	+				-1.7
2,587,703	-				+0.6
2,587,703	-				+1.1
2,587,703	-				+1.1
2,587,749	-				-0.5
2,587,756	-				+0.8
2,587,783	-				-0.9
2,587,869	+				-3.3
2,587,869	+				-1.9
2,587,869	+				-1.7
2,587,870	-				+0.3
2,587,870	-				+0.1
2,587,870	-				-0.5
2,587,870	-				-0.4
2,587,870	-				-0.4
2,587,936	+				-3.0
2,587,937	-				-1.2
2,587,937	-				+0.2
2,587,937	-				+0.4
2,587,945	+				-1.1
2,587,972	+				-1.8
2,587,987	+				-1.8
2,588,008	+				-1.3
2,588,008	+				-2.5
2,588,011	+				-2.1
2,588,011	+				-2.5
2,588,011	+				-1.9
2,588,083	+				-1.9
2,588,083	+				-1.9
2,588,084	-				-1.6
2,588,084	-				-2.8
2,588,084	-				-1.8
2,588,084	-				-1.5
2,588,130	+				-1.4
2,588,131	-				-1.2
2,588,131	-				-3.1
2,588,155	+				-2.5
2,588,155	+				-1.4
2,588,155	+				-1.6
2,588,155	+				-2.4
2,588,156	-				-2.2
2,588,156	-				-1.7
2,588,156	-				-2.6
2,588,156	-				-0.9
2,588,156	-				-0.9
2,588,156	-				-1.3
2,588,156	-				-1.8
2,588,156	-				-3.2
2,588,165	+				-1.1
2,588,186	+				-3.6
2,588,186	+				-1.5
2,588,186	+				-1.0
2,588,186	+				-4.1
2,588,186	+				-1.6
2,588,186	+				-1.8
2,588,186	+				-1.3
2,588,186	+				-1.0
2,588,186	+				-3.1
2,588,186	+				-2.6
2,588,186	+				-3.4
2,588,187	-				-1.8
2,588,187	-				-3.1
2,588,187	-				-1.5
2,588,187	-				-2.9
2,588,189	-				-1.8
2,588,189	-				-0.8
2,588,189	-				-0.4
2,588,314	+		AO356_11415	0.17	-1.2
2,588,314	+		AO356_11415	0.17	-3.4
2,588,405	+		AO356_11415	0.23	-3.5
2,588,405	+		AO356_11415	0.23	-3.1
2,588,405	+		AO356_11415	0.23	-3.1
2,588,405	+		AO356_11415	0.23	-1.4
2,588,406	-		AO356_11415	0.23	-3.8
2,588,406	-		AO356_11415	0.23	-2.4
2,588,406	-		AO356_11415	0.23	-3.5
2,588,406	-		AO356_11415	0.23	-0.8
2,588,779	+		AO356_11415	0.51	-2.7
2,588,780	-		AO356_11415	0.51	-0.4
2,588,891	+		AO356_11415	0.59	-1.1
2,588,891	+		AO356_11415	0.59	-2.6
2,588,892	-		AO356_11415	0.60	-1.8
2,589,005	+		AO356_11415	0.68	-2.8
2,589,107	+		AO356_11415	0.76	-2.7
2,589,108	-		AO356_11415	0.76	-1.3
2,589,108	-		AO356_11415	0.76	-0.6
2,589,156	+		AO356_11415	0.79	-1.6
2,589,156	+		AO356_11415	0.79	-2.6
2,589,157	-		AO356_11415	0.79	-2.5
2,589,157	-		AO356_11415	0.79	-1.3
2,589,157	-		AO356_11415	0.79	-1.7
2,589,157	-		AO356_11415	0.79	-1.5
2,589,157	-		AO356_11415	0.79	-2.5
2,589,157	-		AO356_11415	0.79	-1.1
2,589,157	-		AO356_11415	0.79	-0.6
2,589,157	-		AO356_11415	0.79	-1.3
2,589,157	-		AO356_11415	0.79	-2.1
2,589,157	-		AO356_11415	0.79	-3.7
2,589,157	-		AO356_11415	0.79	-2.6
2,589,408	-				-2.3
2,589,408	-				-1.9
2,589,425	+				-3.4
2,589,425	+				-1.7
2,589,425	+				-0.7
2,589,425	+				-1.0
2,589,425	+				-2.0
2,589,425	+				-1.3
2,589,425	+				-3.0
2,589,425	+				-1.9
2,589,425	+				-2.4
2,589,425	+				-1.0
2,589,425	+				-2.2
2,589,425	+				-1.8
2,589,426	-				-1.2
2,589,426	-				+0.4
2,589,426	-				-0.2
2,589,426	-				-1.8
2,589,426	-				-2.8
2,589,426	-				-2.0
2,589,446	+				-1.0
2,589,446	+				-0.3
2,589,446	+				-0.2
2,589,446	+				-0.8
2,589,446	+				+0.0
2,589,447	-				+4.6
2,589,447	-				+5.1
2,589,447	-				+3.7
2,589,447	-				+4.1
2,589,447	-				+4.2
2,589,447	-				+4.0
2,589,447	-				+4.5
2,589,447	-				+4.3
2,589,488	+				+4.5
2,589,489	-				+4.8
2,589,489	-				+4.8
2,589,489	-				+4.4
2,589,561	-				+4.1
2,589,699	+		AO356_11420	0.14	+5.8
2,589,699	+		AO356_11420	0.14	+5.3
2,589,699	+		AO356_11420	0.14	+5.4
2,589,700	-		AO356_11420	0.14	+5.0
2,589,700	-		AO356_11420	0.14	+4.9
2,589,700	-		AO356_11420	0.14	+5.3
2,589,700	-		AO356_11420	0.14	+5.1
2,589,783	+		AO356_11420	0.19	+5.6
2,589,783	+		AO356_11420	0.19	+5.7
2,589,783	+		AO356_11420	0.19	+6.2
2,589,783	+		AO356_11420	0.19	+5.1
2,589,783	+		AO356_11420	0.19	+5.0
2,589,783	+		AO356_11420	0.19	+5.6
2,589,783	+		AO356_11420	0.19	+5.4
2,589,783	+		AO356_11420	0.19	+5.6
2,589,784	-		AO356_11420	0.19	+5.6
2,589,784	-		AO356_11420	0.19	+5.1
2,589,784	-		AO356_11420	0.19	+4.5
2,589,784	-		AO356_11420	0.19	+5.2
2,589,784	-		AO356_11420	0.19	+5.0
2,590,010	+		AO356_11420	0.31	+5.3
2,590,011	-		AO356_11420	0.31	+5.5
2,590,011	-		AO356_11420	0.31	+5.8
2,590,011	-		AO356_11420	0.31	+5.5
2,590,011	-		AO356_11420	0.31	+5.5
2,590,248	-		AO356_11420	0.45	+5.6
2,590,402	+		AO356_11420	0.53	+5.3