Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS04135 and CA265_RS04140 are separated by 295 nucleotides CA265_RS04140 and CA265_RS04145 are separated by 9 nucleotides
CA265_RS04135: CA265_RS04135 - uroporphyrinogen-III C-methyltransferase, at 995,430 to 996,224
_RS04135
CA265_RS04140: CA265_RS04140 - glycogen synthase, at 996,520 to 997,932
_RS04140
CA265_RS04145: CA265_RS04145 - glucose-1-phosphate adenylyltransferase, at 997,942 to 999,210
_RS04145
Position (kb) 996
997
998 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 995.560 kb on - strand, within CA265_RS04135 at 995.585 kb on - strand, within CA265_RS04135 at 995.587 kb on + strand, within CA265_RS04135 at 995.588 kb on - strand, within CA265_RS04135 at 995.686 kb on - strand, within CA265_RS04135 at 995.686 kb on - strand, within CA265_RS04135 at 995.761 kb on + strand, within CA265_RS04135 at 995.779 kb on - strand, within CA265_RS04135 at 995.779 kb on - strand, within CA265_RS04135 at 995.783 kb on + strand, within CA265_RS04135 at 995.798 kb on + strand, within CA265_RS04135 at 995.856 kb on + strand, within CA265_RS04135 at 995.926 kb on + strand, within CA265_RS04135 at 995.927 kb on - strand, within CA265_RS04135 at 995.928 kb on + strand, within CA265_RS04135 at 995.931 kb on - strand, within CA265_RS04135 at 995.965 kb on + strand, within CA265_RS04135 at 995.984 kb on - strand, within CA265_RS04135 at 996.035 kb on - strand, within CA265_RS04135 at 996.056 kb on + strand, within CA265_RS04135 at 996.158 kb on - strand at 996.166 kb on + strand at 996.303 kb on - strand at 996.333 kb on + strand at 996.333 kb on + strand at 996.340 kb on - strand at 996.340 kb on - strand at 996.346 kb on + strand at 996.358 kb on - strand at 996.367 kb on + strand at 996.411 kb on - strand at 996.411 kb on - strand at 996.413 kb on - strand at 996.413 kb on - strand at 996.415 kb on - strand at 996.420 kb on - strand at 996.534 kb on + strand at 996.534 kb on + strand at 996.534 kb on + strand at 996.536 kb on + strand at 996.584 kb on + strand at 996.618 kb on - strand at 996.664 kb on - strand, within CA265_RS04140 at 996.691 kb on + strand, within CA265_RS04140 at 996.692 kb on - strand, within CA265_RS04140 at 996.692 kb on - strand, within CA265_RS04140 at 996.692 kb on - strand, within CA265_RS04140 at 996.816 kb on - strand, within CA265_RS04140 at 996.823 kb on + strand, within CA265_RS04140 at 996.824 kb on - strand, within CA265_RS04140 at 996.835 kb on - strand, within CA265_RS04140 at 996.882 kb on - strand, within CA265_RS04140 at 996.936 kb on - strand, within CA265_RS04140 at 996.945 kb on + strand, within CA265_RS04140 at 996.968 kb on - strand, within CA265_RS04140 at 997.042 kb on - strand, within CA265_RS04140 at 997.052 kb on - strand, within CA265_RS04140 at 997.052 kb on - strand, within CA265_RS04140 at 997.052 kb on - strand, within CA265_RS04140 at 997.055 kb on + strand, within CA265_RS04140 at 997.111 kb on - strand, within CA265_RS04140 at 997.241 kb on + strand, within CA265_RS04140 at 997.242 kb on - strand, within CA265_RS04140 at 997.244 kb on + strand, within CA265_RS04140 at 997.311 kb on - strand, within CA265_RS04140 at 997.571 kb on - strand, within CA265_RS04140 at 997.572 kb on + strand, within CA265_RS04140 at 997.573 kb on - strand, within CA265_RS04140 at 997.573 kb on - strand, within CA265_RS04140 at 997.606 kb on + strand, within CA265_RS04140 at 997.606 kb on + strand, within CA265_RS04140 at 997.677 kb on - strand, within CA265_RS04140 at 997.696 kb on - strand, within CA265_RS04140 at 997.696 kb on - strand, within CA265_RS04140 at 997.726 kb on - strand, within CA265_RS04140 at 997.737 kb on + strand, within CA265_RS04140 at 997.737 kb on + strand, within CA265_RS04140 at 997.738 kb on - strand, within CA265_RS04140 at 997.738 kb on - strand, within CA265_RS04140 at 997.738 kb on - strand, within CA265_RS04140 at 997.822 kb on + strand at 997.822 kb on + strand at 997.825 kb on - strand at 997.903 kb on + strand at 997.904 kb on - strand at 997.906 kb on - strand at 997.914 kb on - strand at 997.936 kb on + strand at 997.965 kb on + strand at 997.990 kb on - strand at 998.048 kb on - strand at 998.057 kb on + strand at 998.122 kb on - strand, within CA265_RS04145 at 998.159 kb on - strand, within CA265_RS04145 at 998.193 kb on + strand, within CA265_RS04145 at 998.194 kb on - strand, within CA265_RS04145 at 998.216 kb on + strand, within CA265_RS04145 at 998.217 kb on - strand, within CA265_RS04145 at 998.265 kb on + strand, within CA265_RS04145 at 998.265 kb on + strand, within CA265_RS04145 at 998.297 kb on - strand, within CA265_RS04145 at 998.303 kb on + strand, within CA265_RS04145 at 998.304 kb on - strand, within CA265_RS04145 at 998.541 kb on + strand, within CA265_RS04145 at 998.566 kb on + strand, within CA265_RS04145 at 998.566 kb on + strand, within CA265_RS04145 at 998.567 kb on - strand, within CA265_RS04145 at 998.595 kb on + strand, within CA265_RS04145 at 998.596 kb on - strand, within CA265_RS04145 at 998.601 kb on - strand, within CA265_RS04145 at 998.672 kb on + strand, within CA265_RS04145 at 998.678 kb on - strand, within CA265_RS04145 at 998.683 kb on + strand, within CA265_RS04145 at 998.693 kb on - strand, within CA265_RS04145 at 998.693 kb on - strand, within CA265_RS04145 at 998.739 kb on - strand, within CA265_RS04145 at 998.760 kb on + strand, within CA265_RS04145 at 998.769 kb on + strand, within CA265_RS04145 at 998.871 kb on + strand, within CA265_RS04145 at 998.872 kb on - strand, within CA265_RS04145 at 998.875 kb on - strand, within CA265_RS04145 at 998.891 kb on + strand, within CA265_RS04145 at 998.891 kb on + strand, within CA265_RS04145
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 995,560 - CA265_RS04135 0.16 +0.5 995,585 - CA265_RS04135 0.19 -1.6 995,587 + CA265_RS04135 0.20 -1.1 995,588 - CA265_RS04135 0.20 -0.2 995,686 - CA265_RS04135 0.32 +0.5 995,686 - CA265_RS04135 0.32 -0.7 995,761 + CA265_RS04135 0.42 +1.2 995,779 - CA265_RS04135 0.44 +0.3 995,779 - CA265_RS04135 0.44 +1.2 995,783 + CA265_RS04135 0.44 -1.2 995,798 + CA265_RS04135 0.46 -0.3 995,856 + CA265_RS04135 0.54 -1.5 995,926 + CA265_RS04135 0.62 +0.7 995,927 - CA265_RS04135 0.63 -0.7 995,928 + CA265_RS04135 0.63 +0.2 995,931 - CA265_RS04135 0.63 +0.1 995,965 + CA265_RS04135 0.67 +0.0 995,984 - CA265_RS04135 0.70 -1.0 996,035 - CA265_RS04135 0.76 +0.3 996,056 + CA265_RS04135 0.79 -0.3 996,158 - +0.3 996,166 + -0.4 996,303 - -1.6 996,333 + -1.9 996,333 + +1.3 996,340 - +0.6 996,340 - -0.9 996,346 + -1.2 996,358 - -2.2 996,367 + -1.2 996,411 - -0.4 996,411 - +1.3 996,413 - -1.2 996,413 - -0.1 996,415 - -0.5 996,420 - +1.0 996,534 + -2.2 996,534 + -2.2 996,534 + -0.2 996,536 + -1.7 996,584 + -0.7 996,618 - -1.9 996,664 - CA265_RS04140 0.10 -1.4 996,691 + CA265_RS04140 0.12 -0.7 996,692 - CA265_RS04140 0.12 -2.7 996,692 - CA265_RS04140 0.12 -1.8 996,692 - CA265_RS04140 0.12 -2.5 996,816 - CA265_RS04140 0.21 -2.2 996,823 + CA265_RS04140 0.21 -1.8 996,824 - CA265_RS04140 0.22 -1.7 996,835 - CA265_RS04140 0.22 -1.0 996,882 - CA265_RS04140 0.26 -2.7 996,936 - CA265_RS04140 0.29 -1.7 996,945 + CA265_RS04140 0.30 -1.9 996,968 - CA265_RS04140 0.32 -1.3 997,042 - CA265_RS04140 0.37 +0.5 997,052 - CA265_RS04140 0.38 -2.6 997,052 - CA265_RS04140 0.38 -2.5 997,052 - CA265_RS04140 0.38 -1.5 997,055 + CA265_RS04140 0.38 -0.5 997,111 - CA265_RS04140 0.42 -4.0 997,241 + CA265_RS04140 0.51 -1.6 997,242 - CA265_RS04140 0.51 -1.6 997,244 + CA265_RS04140 0.51 -0.8 997,311 - CA265_RS04140 0.56 -1.7 997,571 - CA265_RS04140 0.74 -2.4 997,572 + CA265_RS04140 0.74 -1.5 997,573 - CA265_RS04140 0.75 -2.2 997,573 - CA265_RS04140 0.75 -0.4 997,606 + CA265_RS04140 0.77 -0.7 997,606 + CA265_RS04140 0.77 -1.4 997,677 - CA265_RS04140 0.82 -0.2 997,696 - CA265_RS04140 0.83 -1.2 997,696 - CA265_RS04140 0.83 -2.3 997,726 - CA265_RS04140 0.85 -1.0 997,737 + CA265_RS04140 0.86 -0.5 997,737 + CA265_RS04140 0.86 -0.9 997,738 - CA265_RS04140 0.86 -1.2 997,738 - CA265_RS04140 0.86 -2.5 997,738 - CA265_RS04140 0.86 -1.4 997,822 + -2.7 997,822 + -3.0 997,825 - -1.2 997,903 + -2.5 997,904 - -0.8 997,906 - -0.7 997,914 - -2.8 997,936 + +1.5 997,965 + -1.2 997,990 - -1.6 998,048 - -1.6 998,057 + +0.8 998,122 - CA265_RS04145 0.14 -0.9 998,159 - CA265_RS04145 0.17 -0.7 998,193 + CA265_RS04145 0.20 +0.8 998,194 - CA265_RS04145 0.20 -0.8 998,216 + CA265_RS04145 0.22 -0.7 998,217 - CA265_RS04145 0.22 -1.3 998,265 + CA265_RS04145 0.25 -1.8 998,265 + CA265_RS04145 0.25 -2.5 998,297 - CA265_RS04145 0.28 -1.2 998,303 + CA265_RS04145 0.28 +2.0 998,304 - CA265_RS04145 0.29 -0.7 998,541 + CA265_RS04145 0.47 -0.2 998,566 + CA265_RS04145 0.49 +0.0 998,566 + CA265_RS04145 0.49 -1.4 998,567 - CA265_RS04145 0.49 -0.8 998,595 + CA265_RS04145 0.51 -2.7 998,596 - CA265_RS04145 0.52 -0.6 998,601 - CA265_RS04145 0.52 -2.8 998,672 + CA265_RS04145 0.58 -0.1 998,678 - CA265_RS04145 0.58 -0.8 998,683 + CA265_RS04145 0.58 -0.3 998,693 - CA265_RS04145 0.59 -1.1 998,693 - CA265_RS04145 0.59 +0.2 998,739 - CA265_RS04145 0.63 -1.8 998,760 + CA265_RS04145 0.64 -0.7 998,769 + CA265_RS04145 0.65 -1.5 998,871 + CA265_RS04145 0.73 -2.8 998,872 - CA265_RS04145 0.73 -1.9 998,875 - CA265_RS04145 0.74 -1.6 998,891 + CA265_RS04145 0.75 -0.2 998,891 + CA265_RS04145 0.75 -2.3
Or see this region's nucleotide sequence