Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21635 and AO356_21640 are separated by 495 nucleotides AO356_21640 and AO356_21645 are separated by 11 nucleotides AO356_21645 and AO356_21650 are separated by 34 nucleotides
AO356_21635: AO356_21635 - ABC transporter substrate-binding protein, at 4,842,189 to 4,843,931
_21635
AO356_21640: AO356_21640 - acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] (from data) , at 4,844,427 to 4,845,608
_21640
AO356_21645: AO356_21645 - succinyl-CoA--3-ketoacid-CoA transferase, at 4,845,620 to 4,846,285
_21645
AO356_21650: AO356_21650 - succinyl-CoA--3-ketoacid-CoA transferase, at 4,846,320 to 4,847,018
_21650
Position (kb)
4844
4845
4846 Strain fitness (log2 ratio)
-1
0
1
2 at 4843.449 kb on + strand, within AO356_21635 at 4843.449 kb on + strand, within AO356_21635 at 4843.449 kb on + strand, within AO356_21635 at 4843.790 kb on + strand at 4843.790 kb on + strand at 4843.790 kb on + strand at 4843.790 kb on + strand at 4843.791 kb on - strand at 4843.791 kb on - strand at 4843.791 kb on - strand at 4843.791 kb on - strand at 4843.791 kb on - strand at 4843.818 kb on + strand at 4843.818 kb on + strand at 4843.819 kb on - strand at 4843.890 kb on + strand at 4843.890 kb on + strand at 4843.890 kb on + strand at 4843.890 kb on + strand at 4843.929 kb on + strand at 4843.929 kb on + strand at 4843.930 kb on - strand at 4843.930 kb on - strand at 4844.054 kb on + strand at 4844.054 kb on + strand at 4844.054 kb on + strand at 4844.054 kb on + strand at 4844.054 kb on + strand at 4844.054 kb on + strand at 4844.054 kb on + strand at 4844.054 kb on + strand at 4844.054 kb on + strand at 4844.055 kb on - strand at 4844.055 kb on - strand at 4844.055 kb on - strand at 4844.055 kb on - strand at 4844.055 kb on - strand at 4844.055 kb on - strand at 4844.055 kb on - strand at 4844.055 kb on - strand at 4844.055 kb on - strand at 4844.055 kb on - strand at 4844.058 kb on + strand at 4844.058 kb on + strand at 4844.059 kb on - strand at 4844.118 kb on + strand at 4844.118 kb on + strand at 4844.118 kb on + strand at 4844.118 kb on + strand at 4844.118 kb on + strand at 4844.118 kb on + strand at 4844.118 kb on + strand at 4844.118 kb on + strand at 4844.118 kb on + strand at 4844.119 kb on - strand at 4844.119 kb on - strand at 4844.119 kb on - strand at 4844.119 kb on - strand at 4844.119 kb on - strand at 4844.119 kb on - strand at 4844.119 kb on - strand at 4844.119 kb on - strand at 4844.119 kb on - strand at 4844.122 kb on + strand at 4844.182 kb on + strand at 4844.182 kb on + strand at 4844.182 kb on + strand at 4844.182 kb on + strand at 4844.182 kb on + strand at 4844.186 kb on + strand at 4844.228 kb on - strand at 4844.319 kb on + strand at 4844.773 kb on + strand, within AO356_21640 at 4844.794 kb on - strand, within AO356_21640 at 4845.106 kb on + strand, within AO356_21640 at 4845.107 kb on - strand, within AO356_21640 at 4845.107 kb on - strand, within AO356_21640 at 4845.107 kb on - strand, within AO356_21640 at 4845.145 kb on + strand, within AO356_21640 at 4845.146 kb on - strand, within AO356_21640 at 4846.182 kb on + strand, within AO356_21645 at 4846.182 kb on + strand, within AO356_21645 at 4846.182 kb on + strand, within AO356_21645 at 4846.182 kb on + strand, within AO356_21645 at 4846.183 kb on - strand, within AO356_21645 at 4846.183 kb on - strand, within AO356_21645 at 4846.183 kb on - strand, within AO356_21645 at 4846.183 kb on - strand, within AO356_21645 at 4846.183 kb on - strand at 4846.224 kb on + strand at 4846.224 kb on + strand at 4846.224 kb on + strand at 4846.224 kb on + strand at 4846.224 kb on + strand at 4846.225 kb on - strand at 4846.225 kb on - strand at 4846.227 kb on + strand at 4846.227 kb on + strand at 4846.291 kb on + strand at 4846.325 kb on + strand at 4846.325 kb on + strand at 4846.325 kb on + strand at 4846.326 kb on - strand at 4846.384 kb on + strand at 4846.385 kb on - strand at 4846.385 kb on - strand at 4846.385 kb on - strand at 4846.385 kb on - strand at 4846.385 kb on - strand at 4846.510 kb on + strand, within AO356_21650 at 4846.510 kb on + strand, within AO356_21650 at 4846.511 kb on - strand, within AO356_21650
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 4,843,449 + AO356_21635 0.72 +0.4 4,843,449 + AO356_21635 0.72 -1.0 4,843,449 + AO356_21635 0.72 +0.6 4,843,790 + +0.0 4,843,790 + -0.4 4,843,790 + +0.1 4,843,790 + +0.6 4,843,791 - -0.5 4,843,791 - +1.8 4,843,791 - -1.6 4,843,791 - -0.3 4,843,791 - +0.2 4,843,818 + -0.4 4,843,818 + +0.9 4,843,819 - +0.1 4,843,890 + +1.2 4,843,890 + -0.0 4,843,890 + -0.4 4,843,890 + -0.6 4,843,929 + -0.5 4,843,929 + +0.1 4,843,930 - -0.1 4,843,930 - +1.1 4,844,054 + +0.8 4,844,054 + +0.8 4,844,054 + +0.2 4,844,054 + +0.7 4,844,054 + +0.3 4,844,054 + -0.1 4,844,054 + +1.6 4,844,054 + -0.2 4,844,054 + -0.5 4,844,055 - +0.3 4,844,055 - -0.3 4,844,055 - +0.4 4,844,055 - -0.2 4,844,055 - -0.0 4,844,055 - +0.6 4,844,055 - -0.1 4,844,055 - +0.1 4,844,055 - -0.2 4,844,055 - -0.5 4,844,058 + -0.2 4,844,058 + +0.5 4,844,059 - +0.4 4,844,118 + -0.2 4,844,118 + +0.4 4,844,118 + +0.3 4,844,118 + +0.2 4,844,118 + -0.7 4,844,118 + -1.0 4,844,118 + -0.9 4,844,118 + +0.6 4,844,118 + +0.7 4,844,119 - +0.5 4,844,119 - -0.8 4,844,119 - -0.5 4,844,119 - -0.6 4,844,119 - +0.2 4,844,119 - -1.3 4,844,119 - -0.8 4,844,119 - +0.1 4,844,119 - +1.2 4,844,122 + +1.2 4,844,182 + +0.7 4,844,182 + +0.8 4,844,182 + +0.1 4,844,182 + -0.6 4,844,182 + -0.1 4,844,186 + +0.6 4,844,228 - -0.1 4,844,319 + +0.7 4,844,773 + AO356_21640 0.29 -0.4 4,844,794 - AO356_21640 0.31 -0.8 4,845,106 + AO356_21640 0.57 -1.2 4,845,107 - AO356_21640 0.58 +0.4 4,845,107 - AO356_21640 0.58 -1.7 4,845,107 - AO356_21640 0.58 -1.0 4,845,145 + AO356_21640 0.61 -0.6 4,845,146 - AO356_21640 0.61 -1.0 4,846,182 + AO356_21645 0.84 -0.1 4,846,182 + AO356_21645 0.84 +1.1 4,846,182 + AO356_21645 0.84 -0.5 4,846,182 + AO356_21645 0.84 -0.4 4,846,183 - AO356_21645 0.85 +0.9 4,846,183 - AO356_21645 0.85 +0.2 4,846,183 - AO356_21645 0.85 -0.1 4,846,183 - AO356_21645 0.85 +1.4 4,846,183 - -0.4 4,846,224 + -0.9 4,846,224 + -1.7 4,846,224 + -0.1 4,846,224 + -0.2 4,846,224 + -0.4 4,846,225 - +0.1 4,846,225 - -0.8 4,846,227 + -1.1 4,846,227 + -1.6 4,846,291 + -1.1 4,846,325 + +0.4 4,846,325 + -0.2 4,846,325 + +0.1 4,846,326 - +0.7 4,846,384 + -0.6 4,846,385 - -0.3 4,846,385 - +0.9 4,846,385 - -0.5 4,846,385 - -0.2 4,846,385 - -0.3 4,846,510 + AO356_21650 0.27 -0.4 4,846,510 + AO356_21650 0.27 -0.7 4,846,511 - AO356_21650 0.27 +0.6
Or see this region's nucleotide sequence