Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00910 and AO356_00915 are separated by 373 nucleotides AO356_00915 and AO356_00920 are separated by 288 nucleotides AO356_00920 and AO356_00925 are separated by 67 nucleotides AO356_00925 and AO356_00930 are separated by 156 nucleotides AO356_00930 and AO356_00935 are separated by 129 nucleotides
AO356_00910: AO356_00910 - threonine--tRNA ligase, at 210,411 to 212,333
_00910
AO356_00915: AO356_00915 - hypothetical protein, at 212,707 to 213,009
_00915
AO356_00920: AO356_00920 - cold-shock protein, at 213,298 to 213,510
_00920
AO356_00925: AO356_00925 - hypothetical protein, at 213,578 to 213,892
_00925
AO356_00930: AO356_00930 - hypothetical protein, at 214,049 to 214,354
_00930
AO356_00935: AO356_00935 - hypothetical protein, at 214,484 to 214,681
_00935
Position (kb) 213
214 Strain fitness (log2 ratio) -1
0
1 at 212.571 kb on - strand at 212.571 kb on - strand at 212.718 kb on + strand at 212.800 kb on - strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.803 kb on + strand, within AO356_00915 at 212.804 kb on - strand, within AO356_00915 at 212.804 kb on - strand, within AO356_00915 at 212.804 kb on - strand, within AO356_00915 at 212.804 kb on - strand, within AO356_00915 at 212.804 kb on - strand, within AO356_00915 at 212.804 kb on - strand, within AO356_00915 at 212.804 kb on - strand, within AO356_00915 at 212.804 kb on - strand, within AO356_00915 at 212.804 kb on - strand, within AO356_00915 at 212.804 kb on - strand, within AO356_00915 at 212.896 kb on + strand, within AO356_00915 at 212.910 kb on + strand, within AO356_00915 at 213.012 kb on - strand at 213.043 kb on + strand at 213.073 kb on + strand at 213.073 kb on + strand at 213.073 kb on + strand at 213.074 kb on - strand at 213.074 kb on - strand at 213.074 kb on - strand at 213.077 kb on + strand at 213.077 kb on + strand at 213.077 kb on + strand at 213.077 kb on + strand at 213.077 kb on + strand at 213.078 kb on - strand at 213.129 kb on + strand at 213.225 kb on - strand at 213.230 kb on - strand at 213.264 kb on + strand at 213.264 kb on + strand at 213.265 kb on - strand at 213.265 kb on - strand at 213.275 kb on + strand at 213.276 kb on - strand at 213.277 kb on + strand at 213.392 kb on + strand, within AO356_00920 at 213.392 kb on + strand, within AO356_00920 at 213.481 kb on - strand, within AO356_00920 at 213.509 kb on - strand at 213.706 kb on + strand, within AO356_00925 at 213.865 kb on + strand at 213.866 kb on - strand at 213.915 kb on + strand at 213.916 kb on - strand at 214.038 kb on - strand at 214.053 kb on + strand at 214.053 kb on + strand at 214.054 kb on - strand at 214.054 kb on - strand at 214.065 kb on + strand at 214.066 kb on - strand at 214.108 kb on - strand, within AO356_00930 at 214.108 kb on - strand, within AO356_00930 at 214.108 kb on - strand, within AO356_00930 at 214.108 kb on - strand, within AO356_00930 at 214.108 kb on - strand, within AO356_00930 at 214.108 kb on - strand, within AO356_00930 at 214.156 kb on - strand, within AO356_00930 at 214.236 kb on + strand, within AO356_00930 at 214.236 kb on + strand, within AO356_00930 at 214.236 kb on + strand, within AO356_00930 at 214.237 kb on - strand, within AO356_00930 at 214.237 kb on - strand, within AO356_00930 at 214.271 kb on - strand, within AO356_00930 at 214.346 kb on + strand at 214.347 kb on - strand at 214.347 kb on - strand at 214.412 kb on + strand at 214.413 kb on - strand at 214.413 kb on - strand at 214.413 kb on - strand at 214.446 kb on + strand at 214.446 kb on + strand at 214.456 kb on + strand at 214.456 kb on + strand at 214.457 kb on - strand at 214.457 kb on - strand at 214.499 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 212,571 - +0.2 212,571 - +1.1 212,718 + -1.2 212,800 - AO356_00915 0.31 +0.1 212,803 + AO356_00915 0.32 +1.0 212,803 + AO356_00915 0.32 -0.5 212,803 + AO356_00915 0.32 +0.4 212,803 + AO356_00915 0.32 +0.3 212,803 + AO356_00915 0.32 -0.4 212,803 + AO356_00915 0.32 -0.9 212,803 + AO356_00915 0.32 -0.1 212,803 + AO356_00915 0.32 +0.5 212,803 + AO356_00915 0.32 +0.2 212,803 + AO356_00915 0.32 +0.2 212,803 + AO356_00915 0.32 -0.0 212,803 + AO356_00915 0.32 +0.6 212,804 - AO356_00915 0.32 +0.6 212,804 - AO356_00915 0.32 +0.8 212,804 - AO356_00915 0.32 -0.5 212,804 - AO356_00915 0.32 +0.3 212,804 - AO356_00915 0.32 -0.0 212,804 - AO356_00915 0.32 +0.1 212,804 - AO356_00915 0.32 +0.9 212,804 - AO356_00915 0.32 -0.4 212,804 - AO356_00915 0.32 +0.7 212,804 - AO356_00915 0.32 -0.2 212,896 + AO356_00915 0.62 +0.9 212,910 + AO356_00915 0.67 -0.1 213,012 - +0.5 213,043 + +0.2 213,073 + -0.1 213,073 + +1.0 213,073 + -0.2 213,074 - +0.5 213,074 - -0.9 213,074 - -0.4 213,077 + -0.7 213,077 + -0.1 213,077 + +0.6 213,077 + -0.4 213,077 + -0.3 213,078 - -0.2 213,129 + +0.8 213,225 - -0.1 213,230 - +0.4 213,264 + -0.6 213,264 + -0.5 213,265 - +0.5 213,265 - -0.5 213,275 + +0.5 213,276 - -1.0 213,277 + -0.3 213,392 + AO356_00920 0.44 -0.6 213,392 + AO356_00920 0.44 -1.2 213,481 - AO356_00920 0.86 +0.2 213,509 - +0.6 213,706 + AO356_00925 0.41 +0.3 213,865 + +0.1 213,866 - +0.6 213,915 + -1.2 213,916 - +0.1 214,038 - -1.7 214,053 + +0.4 214,053 + -0.1 214,054 - -0.6 214,054 - -0.9 214,065 + +0.7 214,066 - +0.4 214,108 - AO356_00930 0.19 +0.4 214,108 - AO356_00930 0.19 +1.2 214,108 - AO356_00930 0.19 -0.1 214,108 - AO356_00930 0.19 +0.9 214,108 - AO356_00930 0.19 +0.5 214,108 - AO356_00930 0.19 +0.2 214,156 - AO356_00930 0.35 -0.1 214,236 + AO356_00930 0.61 -0.3 214,236 + AO356_00930 0.61 +0.0 214,236 + AO356_00930 0.61 -1.0 214,237 - AO356_00930 0.61 +0.3 214,237 - AO356_00930 0.61 +0.5 214,271 - AO356_00930 0.73 +0.3 214,346 + -0.5 214,347 - +0.7 214,347 - +0.2 214,412 + +0.2 214,413 - -0.1 214,413 - +1.1 214,413 - +0.6 214,446 + -0.1 214,446 + +0.7 214,456 + -0.3 214,456 + +0.3 214,457 - -0.5 214,457 - -0.9 214,499 - +1.0
Or see this region's nucleotide sequence