Experiment: casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS08050 and EX31_RS08055 are separated by 134 nucleotides EX31_RS08055 and EX31_RS08060 are separated by 217 nucleotides
EX31_RS08050: EX31_RS08050 - cell division protein FtsP, at 100,705 to 102,120
_RS08050
EX31_RS08055: EX31_RS08055 - 1-acylglycerol-3-phosphate O-acyltransferase, at 102,255 to 102,992
_RS08055
EX31_RS08060: EX31_RS08060 - DNA topoisomerase IV subunit A, at 103,210 to 105,483
_RS08060
Position (kb) 102
103 Strain fitness (log2 ratio) -2
-1
0
1
2 at 101.268 kb on + strand, within EX31_RS08050 at 101.316 kb on + strand, within EX31_RS08050 at 101.326 kb on - strand, within EX31_RS08050 at 101.459 kb on + strand, within EX31_RS08050 at 101.459 kb on + strand, within EX31_RS08050 at 101.460 kb on - strand, within EX31_RS08050 at 101.460 kb on - strand, within EX31_RS08050 at 101.460 kb on - strand, within EX31_RS08050 at 101.460 kb on - strand, within EX31_RS08050 at 101.480 kb on - strand, within EX31_RS08050 at 101.569 kb on - strand, within EX31_RS08050 at 101.569 kb on - strand, within EX31_RS08050 at 101.591 kb on + strand, within EX31_RS08050 at 101.592 kb on - strand, within EX31_RS08050 at 101.661 kb on - strand, within EX31_RS08050 at 101.699 kb on + strand, within EX31_RS08050 at 101.821 kb on - strand, within EX31_RS08050 at 101.821 kb on - strand, within EX31_RS08050 at 101.849 kb on + strand, within EX31_RS08050 at 101.849 kb on + strand, within EX31_RS08050 at 101.849 kb on + strand, within EX31_RS08050 at 101.853 kb on + strand, within EX31_RS08050 at 101.853 kb on + strand, within EX31_RS08050 at 101.854 kb on - strand, within EX31_RS08050 at 101.900 kb on + strand, within EX31_RS08050 at 101.900 kb on + strand, within EX31_RS08050 at 101.900 kb on + strand, within EX31_RS08050 at 101.900 kb on + strand, within EX31_RS08050 at 101.901 kb on - strand, within EX31_RS08050 at 101.901 kb on - strand, within EX31_RS08050 at 101.901 kb on - strand, within EX31_RS08050 at 101.901 kb on - strand, within EX31_RS08050 at 101.910 kb on + strand, within EX31_RS08050 at 102.020 kb on - strand at 102.020 kb on - strand at 102.020 kb on - strand at 102.052 kb on + strand at 102.052 kb on + strand at 102.053 kb on - strand at 102.053 kb on - strand at 102.053 kb on - strand at 102.120 kb on + strand at 102.120 kb on + strand at 102.120 kb on + strand at 102.121 kb on - strand at 102.121 kb on - strand at 102.121 kb on - strand at 102.121 kb on - strand at 102.144 kb on + strand at 102.145 kb on - strand at 102.152 kb on - strand at 102.152 kb on - strand at 102.197 kb on + strand at 102.197 kb on + strand at 102.197 kb on + strand at 102.197 kb on + strand at 102.198 kb on - strand at 102.198 kb on - strand at 102.198 kb on - strand at 102.198 kb on - strand at 102.198 kb on - strand at 102.198 kb on - strand at 102.232 kb on - strand at 102.245 kb on - strand at 102.245 kb on - strand at 102.245 kb on - strand at 102.246 kb on + strand at 102.250 kb on + strand at 102.251 kb on - strand at 102.251 kb on - strand at 102.251 kb on - strand at 102.254 kb on - strand at 102.254 kb on - strand at 102.256 kb on + strand at 102.257 kb on - strand at 103.004 kb on - strand at 103.004 kb on - strand at 103.010 kb on - strand at 103.010 kb on - strand at 103.010 kb on - strand at 103.063 kb on - strand at 103.063 kb on - strand at 103.063 kb on - strand at 103.099 kb on - strand at 103.099 kb on - strand at 103.105 kb on - strand at 103.105 kb on - strand at 103.105 kb on - strand at 103.199 kb on + strand at 103.211 kb on + strand at 103.211 kb on + strand at 103.212 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (C) remove 101,268 + EX31_RS08050 0.40 +0.2 101,316 + EX31_RS08050 0.43 -1.6 101,326 - EX31_RS08050 0.44 +0.9 101,459 + EX31_RS08050 0.53 -1.9 101,459 + EX31_RS08050 0.53 -0.0 101,460 - EX31_RS08050 0.53 -1.5 101,460 - EX31_RS08050 0.53 +0.7 101,460 - EX31_RS08050 0.53 -2.3 101,460 - EX31_RS08050 0.53 -1.1 101,480 - EX31_RS08050 0.55 -0.3 101,569 - EX31_RS08050 0.61 +0.1 101,569 - EX31_RS08050 0.61 -0.6 101,591 + EX31_RS08050 0.63 -1.4 101,592 - EX31_RS08050 0.63 +1.4 101,661 - EX31_RS08050 0.68 +0.4 101,699 + EX31_RS08050 0.70 +1.1 101,821 - EX31_RS08050 0.79 +0.6 101,821 - EX31_RS08050 0.79 +0.8 101,849 + EX31_RS08050 0.81 +0.7 101,849 + EX31_RS08050 0.81 +0.7 101,849 + EX31_RS08050 0.81 +1.7 101,853 + EX31_RS08050 0.81 -0.2 101,853 + EX31_RS08050 0.81 -0.4 101,854 - EX31_RS08050 0.81 -1.1 101,900 + EX31_RS08050 0.84 +1.7 101,900 + EX31_RS08050 0.84 +1.7 101,900 + EX31_RS08050 0.84 +1.5 101,900 + EX31_RS08050 0.84 +0.4 101,901 - EX31_RS08050 0.84 +0.2 101,901 - EX31_RS08050 0.84 -1.1 101,901 - EX31_RS08050 0.84 -0.6 101,901 - EX31_RS08050 0.84 -0.7 101,910 + EX31_RS08050 0.85 +0.3 102,020 - -0.9 102,020 - +2.3 102,020 - +2.1 102,052 + -0.1 102,052 + -0.4 102,053 - +1.1 102,053 - +1.7 102,053 - +0.7 102,120 + -1.6 102,120 + +1.0 102,120 + +1.3 102,121 - +0.7 102,121 - +1.1 102,121 - -0.5 102,121 - -1.3 102,144 + -0.2 102,145 - +0.1 102,152 - +1.7 102,152 - -2.4 102,197 + -0.8 102,197 + -1.8 102,197 + -1.6 102,197 + +0.1 102,198 - +0.7 102,198 - +0.6 102,198 - -0.1 102,198 - +0.1 102,198 - +1.2 102,198 - -0.3 102,232 - -1.2 102,245 - +1.0 102,245 - +1.3 102,245 - +0.1 102,246 + +0.1 102,250 + +1.7 102,251 - +0.1 102,251 - -0.3 102,251 - -0.0 102,254 - -0.3 102,254 - +0.6 102,256 + +1.7 102,257 - +0.3 103,004 - -0.0 103,004 - +1.7 103,010 - +1.7 103,010 - +0.5 103,010 - -0.8 103,063 - +0.5 103,063 - -0.8 103,063 - +0.2 103,099 - -0.1 103,099 - -0.5 103,105 - -0.3 103,105 - -1.5 103,105 - -0.5 103,199 + -0.1 103,211 + -0.4 103,211 + +0.2 103,212 - -0.0
Or see this region's nucleotide sequence