Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_12895 and AO356_12900 are separated by 78 nucleotides AO356_12900 and AO356_12905 are separated by 199 nucleotides AO356_12905 and AO356_12910 overlap by 14 nucleotides
AO356_12895: AO356_12895 - polyphosphate kinase, at 2,935,176 to 2,937,392
_12895
AO356_12900: AO356_12900 - exopolyphosphatase, at 2,937,471 to 2,938,973
_12900
AO356_12905: AO356_12905 - amino acid ABC transporter ATP-binding protein, at 2,939,173 to 2,939,910
_12905
AO356_12910: AO356_12910 - amino acid ABC transporter permease, at 2,939,897 to 2,940,547
_12910
Position (kb)
2937
2938
2939 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2936.598 kb on + strand, within AO356_12895 at 2936.598 kb on + strand, within AO356_12895 at 2936.598 kb on + strand, within AO356_12895 at 2936.598 kb on + strand, within AO356_12895 at 2936.598 kb on + strand, within AO356_12895 at 2936.598 kb on + strand, within AO356_12895 at 2936.598 kb on + strand, within AO356_12895 at 2936.598 kb on + strand, within AO356_12895 at 2936.598 kb on + strand, within AO356_12895 at 2936.599 kb on - strand, within AO356_12895 at 2936.599 kb on - strand, within AO356_12895 at 2936.599 kb on - strand, within AO356_12895 at 2936.673 kb on + strand, within AO356_12895 at 2936.697 kb on + strand, within AO356_12895 at 2936.697 kb on + strand, within AO356_12895 at 2936.697 kb on + strand, within AO356_12895 at 2936.697 kb on + strand, within AO356_12895 at 2936.698 kb on - strand, within AO356_12895 at 2936.698 kb on - strand, within AO356_12895 at 2936.698 kb on - strand, within AO356_12895 at 2936.698 kb on - strand, within AO356_12895 at 2936.698 kb on - strand, within AO356_12895 at 2936.698 kb on - strand, within AO356_12895 at 2936.698 kb on - strand, within AO356_12895 at 2936.698 kb on - strand, within AO356_12895 at 2936.721 kb on + strand, within AO356_12895 at 2936.721 kb on + strand, within AO356_12895 at 2936.721 kb on + strand, within AO356_12895 at 2936.721 kb on + strand, within AO356_12895 at 2936.730 kb on + strand, within AO356_12895 at 2936.730 kb on + strand, within AO356_12895 at 2936.731 kb on - strand, within AO356_12895 at 2936.731 kb on - strand, within AO356_12895 at 2936.731 kb on - strand, within AO356_12895 at 2936.967 kb on + strand, within AO356_12895 at 2936.967 kb on + strand, within AO356_12895 at 2936.967 kb on + strand, within AO356_12895 at 2936.967 kb on + strand, within AO356_12895 at 2936.967 kb on + strand, within AO356_12895 at 2936.968 kb on - strand, within AO356_12895 at 2936.968 kb on - strand, within AO356_12895 at 2936.968 kb on - strand, within AO356_12895 at 2936.968 kb on - strand, within AO356_12895 at 2936.968 kb on - strand, within AO356_12895 at 2936.968 kb on - strand, within AO356_12895 at 2936.968 kb on - strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.064 kb on + strand, within AO356_12895 at 2937.065 kb on - strand, within AO356_12895 at 2937.065 kb on - strand, within AO356_12895 at 2937.065 kb on - strand, within AO356_12895 at 2937.065 kb on - strand, within AO356_12895 at 2937.065 kb on - strand, within AO356_12895 at 2937.065 kb on - strand, within AO356_12895 at 2937.065 kb on - strand, within AO356_12895 at 2937.065 kb on - strand, within AO356_12895 at 2937.108 kb on + strand, within AO356_12895 at 2937.108 kb on + strand, within AO356_12895 at 2937.108 kb on + strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.109 kb on - strand, within AO356_12895 at 2937.249 kb on + strand at 2937.249 kb on + strand at 2937.249 kb on + strand at 2937.280 kb on + strand at 2937.280 kb on + strand at 2937.281 kb on - strand at 2937.281 kb on - strand at 2937.281 kb on - strand at 2937.297 kb on + strand at 2937.297 kb on + strand at 2937.298 kb on - strand at 2937.298 kb on - strand at 2937.298 kb on - strand at 2937.298 kb on - strand at 2937.391 kb on - strand at 2937.391 kb on - strand at 2937.462 kb on + strand at 2937.463 kb on - strand at 2937.463 kb on - strand at 2937.463 kb on - strand at 2937.670 kb on - strand, within AO356_12900 at 2937.719 kb on + strand, within AO356_12900 at 2937.719 kb on + strand, within AO356_12900 at 2937.720 kb on - strand, within AO356_12900 at 2937.756 kb on + strand, within AO356_12900 at 2937.757 kb on - strand, within AO356_12900 at 2937.817 kb on + strand, within AO356_12900 at 2937.817 kb on + strand, within AO356_12900 at 2937.842 kb on - strand, within AO356_12900 at 2937.997 kb on + strand, within AO356_12900 at 2938.067 kb on - strand, within AO356_12900 at 2938.459 kb on + strand, within AO356_12900 at 2938.600 kb on + strand, within AO356_12900 at 2938.601 kb on - strand, within AO356_12900 at 2939.714 kb on + strand, within AO356_12905 at 2939.715 kb on - strand, within AO356_12905 at 2939.873 kb on + strand at 2939.873 kb on + strand at 2939.874 kb on - strand at 2939.874 kb on - strand at 2939.874 kb on - strand at 2939.874 kb on - strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.876 kb on + strand at 2939.877 kb on - strand at 2939.877 kb on - strand at 2939.877 kb on - strand at 2939.877 kb on - strand at 2939.877 kb on - strand at 2939.877 kb on - strand at 2939.877 kb on - strand at 2939.877 kb on - strand at 2939.877 kb on - strand at 2939.880 kb on + strand at 2939.880 kb on + strand at 2939.880 kb on + strand at 2939.881 kb on - strand at 2939.881 kb on - strand at 2939.881 kb on - strand at 2939.881 kb on - strand at 2939.881 kb on - strand at 2939.881 kb on - strand at 2939.881 kb on - strand at 2939.892 kb on + strand at 2939.898 kb on + strand at 2939.898 kb on + strand at 2939.898 kb on + strand at 2939.898 kb on + strand at 2939.898 kb on + strand at 2939.898 kb on + strand at 2939.898 kb on + strand at 2939.898 kb on + strand at 2939.898 kb on + strand at 2939.898 kb on + strand at 2939.898 kb on + strand at 2939.899 kb on - strand at 2939.899 kb on - strand at 2939.899 kb on - strand at 2939.967 kb on + strand, within AO356_12910
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 2,936,598 + AO356_12895 0.64 +1.4 2,936,598 + AO356_12895 0.64 +0.8 2,936,598 + AO356_12895 0.64 +1.3 2,936,598 + AO356_12895 0.64 +0.2 2,936,598 + AO356_12895 0.64 +1.0 2,936,598 + AO356_12895 0.64 +0.9 2,936,598 + AO356_12895 0.64 +0.9 2,936,598 + AO356_12895 0.64 +1.2 2,936,598 + AO356_12895 0.64 +0.7 2,936,599 - AO356_12895 0.64 +0.6 2,936,599 - AO356_12895 0.64 +0.4 2,936,599 - AO356_12895 0.64 +0.7 2,936,673 + AO356_12895 0.68 +1.0 2,936,697 + AO356_12895 0.69 +1.1 2,936,697 + AO356_12895 0.69 +1.1 2,936,697 + AO356_12895 0.69 +0.9 2,936,697 + AO356_12895 0.69 +0.8 2,936,698 - AO356_12895 0.69 +1.0 2,936,698 - AO356_12895 0.69 +1.5 2,936,698 - AO356_12895 0.69 +1.1 2,936,698 - AO356_12895 0.69 +0.4 2,936,698 - AO356_12895 0.69 +1.3 2,936,698 - AO356_12895 0.69 +1.1 2,936,698 - AO356_12895 0.69 +1.5 2,936,698 - AO356_12895 0.69 +0.7 2,936,721 + AO356_12895 0.70 +1.0 2,936,721 + AO356_12895 0.70 +0.9 2,936,721 + AO356_12895 0.70 +1.1 2,936,721 + AO356_12895 0.70 +1.1 2,936,730 + AO356_12895 0.70 +1.1 2,936,730 + AO356_12895 0.70 +0.7 2,936,731 - AO356_12895 0.70 +1.5 2,936,731 - AO356_12895 0.70 +0.8 2,936,731 - AO356_12895 0.70 +1.2 2,936,967 + AO356_12895 0.81 +1.3 2,936,967 + AO356_12895 0.81 +0.6 2,936,967 + AO356_12895 0.81 +0.9 2,936,967 + AO356_12895 0.81 +0.9 2,936,967 + AO356_12895 0.81 -0.5 2,936,968 - AO356_12895 0.81 +0.9 2,936,968 - AO356_12895 0.81 +0.2 2,936,968 - AO356_12895 0.81 +0.4 2,936,968 - AO356_12895 0.81 +0.9 2,936,968 - AO356_12895 0.81 +1.0 2,936,968 - AO356_12895 0.81 +0.7 2,936,968 - AO356_12895 0.81 +0.9 2,937,064 + AO356_12895 0.85 +0.8 2,937,064 + AO356_12895 0.85 +1.3 2,937,064 + AO356_12895 0.85 +1.2 2,937,064 + AO356_12895 0.85 +0.6 2,937,064 + AO356_12895 0.85 +1.2 2,937,064 + AO356_12895 0.85 +0.7 2,937,064 + AO356_12895 0.85 +1.4 2,937,064 + AO356_12895 0.85 +1.1 2,937,064 + AO356_12895 0.85 +0.6 2,937,064 + AO356_12895 0.85 +1.5 2,937,064 + AO356_12895 0.85 +0.8 2,937,065 - AO356_12895 0.85 +1.5 2,937,065 - AO356_12895 0.85 +1.0 2,937,065 - AO356_12895 0.85 +0.5 2,937,065 - AO356_12895 0.85 +0.6 2,937,065 - AO356_12895 0.85 +1.3 2,937,065 - AO356_12895 0.85 +0.8 2,937,065 - AO356_12895 0.85 +1.2 2,937,065 - AO356_12895 0.85 +0.8 2,937,108 + AO356_12895 0.87 +1.1 2,937,108 + AO356_12895 0.87 +1.0 2,937,108 + AO356_12895 0.87 +1.3 2,937,109 - AO356_12895 0.87 +1.0 2,937,109 - AO356_12895 0.87 +1.1 2,937,109 - AO356_12895 0.87 +0.6 2,937,109 - AO356_12895 0.87 +0.7 2,937,109 - AO356_12895 0.87 +0.7 2,937,109 - AO356_12895 0.87 -0.1 2,937,109 - AO356_12895 0.87 +0.3 2,937,109 - AO356_12895 0.87 +0.4 2,937,109 - AO356_12895 0.87 +1.0 2,937,109 - AO356_12895 0.87 +0.8 2,937,109 - AO356_12895 0.87 +0.8 2,937,109 - AO356_12895 0.87 +0.9 2,937,249 + +1.2 2,937,249 + +1.4 2,937,249 + +0.7 2,937,280 + +0.5 2,937,280 + +1.2 2,937,281 - +1.6 2,937,281 - +1.7 2,937,281 - +0.9 2,937,297 + +1.2 2,937,297 + +0.9 2,937,298 - +1.1 2,937,298 - +0.5 2,937,298 - +1.2 2,937,298 - +2.3 2,937,391 - -1.0 2,937,391 - +0.2 2,937,462 + -0.5 2,937,463 - +0.2 2,937,463 - +0.7 2,937,463 - +0.4 2,937,670 - AO356_12900 0.13 -0.3 2,937,719 + AO356_12900 0.17 -1.3 2,937,719 + AO356_12900 0.17 +0.2 2,937,720 - AO356_12900 0.17 -2.4 2,937,756 + AO356_12900 0.19 +1.8 2,937,757 - AO356_12900 0.19 -0.6 2,937,817 + AO356_12900 0.23 -1.6 2,937,817 + AO356_12900 0.23 -0.2 2,937,842 - AO356_12900 0.25 +0.9 2,937,997 + AO356_12900 0.35 -0.6 2,938,067 - AO356_12900 0.40 +0.5 2,938,459 + AO356_12900 0.66 +0.2 2,938,600 + AO356_12900 0.75 -0.1 2,938,601 - AO356_12900 0.75 -0.6 2,939,714 + AO356_12905 0.73 +0.3 2,939,715 - AO356_12905 0.73 +1.0 2,939,873 + +0.6 2,939,873 + +0.5 2,939,874 - -0.8 2,939,874 - -0.9 2,939,874 - -0.1 2,939,874 - +0.2 2,939,876 + +0.9 2,939,876 + +0.9 2,939,876 + -1.2 2,939,876 + +0.9 2,939,876 + -0.7 2,939,876 + +0.1 2,939,876 + +0.4 2,939,876 + +0.1 2,939,876 + +0.2 2,939,876 + +0.4 2,939,876 + +0.9 2,939,876 + +0.9 2,939,876 + -1.3 2,939,876 + -0.5 2,939,876 + -0.5 2,939,877 - +0.4 2,939,877 - +0.1 2,939,877 - -1.6 2,939,877 - -0.5 2,939,877 - -0.3 2,939,877 - +1.1 2,939,877 - -0.2 2,939,877 - +0.4 2,939,877 - -0.1 2,939,880 + -0.2 2,939,880 + +0.5 2,939,880 + +0.9 2,939,881 - +0.1 2,939,881 - -0.3 2,939,881 - +1.7 2,939,881 - +0.3 2,939,881 - +0.1 2,939,881 - +0.9 2,939,881 - +0.4 2,939,892 + -1.2 2,939,898 + +0.3 2,939,898 + +0.7 2,939,898 + -0.6 2,939,898 + +0.5 2,939,898 + +0.6 2,939,898 + +0.5 2,939,898 + +0.2 2,939,898 + +0.4 2,939,898 + +0.7 2,939,898 + +0.3 2,939,898 + +0.0 2,939,899 - +0.5 2,939,899 - -1.7 2,939,899 - -0.7 2,939,967 + AO356_12910 0.11 +0.1
Or see this region's nucleotide sequence