Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS22015 and EX31_RS22020 are separated by 41 nucleotides EX31_RS22020 and EX31_RS22025 are separated by 11 nucleotides EX31_RS22025 and EX31_RS22030 are separated by 248 nucleotides
EX31_RS22015: EX31_RS22015 - ABC transporter ATP-binding protein, at 147,894 to 148,670
_RS22015
EX31_RS22020: EX31_RS22020 - ABC transporter permease, at 148,712 to 149,476
_RS22020
EX31_RS22025: EX31_RS22025 - ABC transporter substrate-binding protein, at 149,488 to 150,501
_RS22025
EX31_RS22030: EX31_RS22030 - exonuclease subunit SbcC, at 150,750 to 153,998
_RS22030
Position (kb) 149
150
151 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 148.512 kb on + strand, within EX31_RS22015 at 148.523 kb on + strand, within EX31_RS22015 at 148.523 kb on + strand, within EX31_RS22015 at 148.523 kb on + strand, within EX31_RS22015 at 148.589 kb on + strand, within EX31_RS22015 at 148.591 kb on + strand, within EX31_RS22015 at 148.591 kb on + strand, within EX31_RS22015 at 148.591 kb on + strand, within EX31_RS22015 at 148.591 kb on + strand, within EX31_RS22015 at 148.591 kb on + strand, within EX31_RS22015 at 148.592 kb on - strand, within EX31_RS22015 at 148.660 kb on + strand at 148.682 kb on + strand at 148.682 kb on + strand at 148.683 kb on - strand at 148.683 kb on - strand at 148.683 kb on - strand at 148.683 kb on - strand at 148.684 kb on + strand at 148.684 kb on + strand at 148.685 kb on - strand at 148.809 kb on + strand, within EX31_RS22020 at 148.809 kb on + strand, within EX31_RS22020 at 148.809 kb on + strand, within EX31_RS22020 at 148.809 kb on + strand, within EX31_RS22020 at 148.809 kb on + strand, within EX31_RS22020 at 148.809 kb on + strand, within EX31_RS22020 at 148.809 kb on + strand, within EX31_RS22020 at 148.809 kb on + strand, within EX31_RS22020 at 148.810 kb on - strand, within EX31_RS22020 at 148.810 kb on - strand, within EX31_RS22020 at 148.810 kb on - strand, within EX31_RS22020 at 148.810 kb on - strand, within EX31_RS22020 at 148.810 kb on - strand, within EX31_RS22020 at 148.810 kb on - strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.813 kb on + strand, within EX31_RS22020 at 148.814 kb on - strand, within EX31_RS22020 at 148.814 kb on - strand, within EX31_RS22020 at 148.814 kb on - strand, within EX31_RS22020 at 148.825 kb on + strand, within EX31_RS22020 at 148.826 kb on - strand, within EX31_RS22020 at 148.984 kb on + strand, within EX31_RS22020 at 149.006 kb on + strand, within EX31_RS22020 at 149.007 kb on - strand, within EX31_RS22020 at 149.053 kb on - strand, within EX31_RS22020 at 149.119 kb on + strand, within EX31_RS22020 at 149.137 kb on + strand, within EX31_RS22020 at 149.137 kb on + strand, within EX31_RS22020 at 149.137 kb on + strand, within EX31_RS22020 at 149.137 kb on + strand, within EX31_RS22020 at 149.138 kb on - strand, within EX31_RS22020 at 149.138 kb on - strand, within EX31_RS22020 at 149.138 kb on - strand, within EX31_RS22020 at 149.138 kb on - strand, within EX31_RS22020 at 149.253 kb on - strand, within EX31_RS22020 at 149.451 kb on - strand at 149.451 kb on - strand at 149.498 kb on + strand at 149.499 kb on - strand at 149.559 kb on - strand at 149.604 kb on - strand, within EX31_RS22025 at 149.604 kb on - strand, within EX31_RS22025 at 149.604 kb on - strand, within EX31_RS22025 at 149.686 kb on - strand, within EX31_RS22025 at 149.724 kb on - strand, within EX31_RS22025 at 149.828 kb on + strand, within EX31_RS22025 at 149.828 kb on + strand, within EX31_RS22025 at 149.829 kb on - strand, within EX31_RS22025 at 149.829 kb on - strand, within EX31_RS22025 at 149.829 kb on - strand, within EX31_RS22025 at 149.829 kb on - strand, within EX31_RS22025 at 149.904 kb on + strand, within EX31_RS22025 at 149.904 kb on + strand, within EX31_RS22025 at 149.904 kb on + strand, within EX31_RS22025 at 149.904 kb on + strand, within EX31_RS22025 at 149.904 kb on + strand, within EX31_RS22025 at 149.904 kb on + strand, within EX31_RS22025 at 149.904 kb on + strand, within EX31_RS22025 at 149.904 kb on + strand, within EX31_RS22025 at 149.905 kb on - strand, within EX31_RS22025 at 149.905 kb on - strand, within EX31_RS22025 at 149.905 kb on - strand, within EX31_RS22025 at 149.905 kb on - strand, within EX31_RS22025 at 149.905 kb on - strand, within EX31_RS22025 at 149.905 kb on - strand, within EX31_RS22025 at 149.905 kb on - strand, within EX31_RS22025 at 149.907 kb on - strand, within EX31_RS22025 at 149.907 kb on - strand, within EX31_RS22025 at 149.907 kb on - strand, within EX31_RS22025 at 149.908 kb on + strand, within EX31_RS22025 at 149.908 kb on + strand, within EX31_RS22025 at 149.908 kb on + strand, within EX31_RS22025 at 149.908 kb on + strand, within EX31_RS22025 at 149.908 kb on + strand, within EX31_RS22025 at 149.909 kb on - strand, within EX31_RS22025 at 149.909 kb on - strand, within EX31_RS22025 at 150.003 kb on + strand, within EX31_RS22025 at 150.072 kb on + strand, within EX31_RS22025 at 150.072 kb on + strand, within EX31_RS22025 at 150.072 kb on + strand, within EX31_RS22025 at 150.073 kb on - strand, within EX31_RS22025 at 150.073 kb on - strand, within EX31_RS22025 at 150.073 kb on - strand, within EX31_RS22025 at 150.112 kb on + strand, within EX31_RS22025 at 150.113 kb on - strand, within EX31_RS22025 at 150.113 kb on - strand, within EX31_RS22025 at 150.123 kb on + strand, within EX31_RS22025 at 150.123 kb on + strand, within EX31_RS22025 at 150.124 kb on - strand, within EX31_RS22025 at 150.139 kb on - strand, within EX31_RS22025 at 150.329 kb on + strand, within EX31_RS22025 at 150.329 kb on + strand, within EX31_RS22025 at 150.329 kb on + strand, within EX31_RS22025 at 150.329 kb on + strand, within EX31_RS22025 at 150.329 kb on + strand, within EX31_RS22025 at 150.329 kb on + strand, within EX31_RS22025 at 150.329 kb on + strand, within EX31_RS22025 at 150.329 kb on + strand, within EX31_RS22025 at 150.329 kb on + strand, within EX31_RS22025 at 150.330 kb on - strand, within EX31_RS22025 at 150.330 kb on - strand, within EX31_RS22025 at 150.330 kb on - strand, within EX31_RS22025 at 150.330 kb on - strand, within EX31_RS22025 at 150.330 kb on - strand, within EX31_RS22025 at 150.330 kb on - strand, within EX31_RS22025 at 150.522 kb on - strand at 150.541 kb on + strand at 150.541 kb on + strand at 150.542 kb on - strand at 150.542 kb on - strand at 150.553 kb on + strand at 150.553 kb on + strand at 150.553 kb on + strand at 150.554 kb on - strand at 150.554 kb on - strand at 150.554 kb on - strand at 150.554 kb on - strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.555 kb on + strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.556 kb on - strand at 150.559 kb on + strand at 150.559 kb on + strand at 150.559 kb on + strand at 150.560 kb on - strand at 150.560 kb on - strand at 150.758 kb on + strand at 150.974 kb on + strand at 151.130 kb on - strand, within EX31_RS22030 at 151.168 kb on + strand, within EX31_RS22030 at 151.168 kb on + strand, within EX31_RS22030 at 151.169 kb on - strand, within EX31_RS22030 at 151.169 kb on - strand, within EX31_RS22030 at 151.169 kb on - strand, within EX31_RS22030 at 151.169 kb on - strand, within EX31_RS22030 at 151.169 kb on - strand, within EX31_RS22030 at 151.169 kb on - strand, within EX31_RS22030 at 151.169 kb on - strand, within EX31_RS22030 at 151.249 kb on + strand, within EX31_RS22030
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 148,512 + EX31_RS22015 0.80 +1.2 148,523 + EX31_RS22015 0.81 +0.9 148,523 + EX31_RS22015 0.81 -1.9 148,523 + EX31_RS22015 0.81 -1.4 148,589 + EX31_RS22015 0.89 -1.0 148,591 + EX31_RS22015 0.90 -0.5 148,591 + EX31_RS22015 0.90 +0.2 148,591 + EX31_RS22015 0.90 -0.6 148,591 + EX31_RS22015 0.90 -0.8 148,591 + EX31_RS22015 0.90 +0.5 148,592 - EX31_RS22015 0.90 -1.1 148,660 + +1.4 148,682 + +0.5 148,682 + -0.6 148,683 - +0.4 148,683 - -2.1 148,683 - -1.1 148,683 - -0.2 148,684 + -0.6 148,684 + +0.1 148,685 - +0.5 148,809 + EX31_RS22020 0.13 +1.4 148,809 + EX31_RS22020 0.13 +1.9 148,809 + EX31_RS22020 0.13 +1.5 148,809 + EX31_RS22020 0.13 +2.5 148,809 + EX31_RS22020 0.13 -0.1 148,809 + EX31_RS22020 0.13 -0.5 148,809 + EX31_RS22020 0.13 +0.9 148,809 + EX31_RS22020 0.13 -0.4 148,810 - EX31_RS22020 0.13 -2.1 148,810 - EX31_RS22020 0.13 +0.7 148,810 - EX31_RS22020 0.13 -0.4 148,810 - EX31_RS22020 0.13 -1.5 148,810 - EX31_RS22020 0.13 +1.8 148,810 - EX31_RS22020 0.13 -3.2 148,813 + EX31_RS22020 0.13 +0.4 148,813 + EX31_RS22020 0.13 +0.2 148,813 + EX31_RS22020 0.13 -0.7 148,813 + EX31_RS22020 0.13 +0.2 148,813 + EX31_RS22020 0.13 -0.0 148,813 + EX31_RS22020 0.13 +0.4 148,813 + EX31_RS22020 0.13 +0.4 148,813 + EX31_RS22020 0.13 -0.9 148,813 + EX31_RS22020 0.13 -1.4 148,813 + EX31_RS22020 0.13 +1.1 148,813 + EX31_RS22020 0.13 -0.4 148,814 - EX31_RS22020 0.13 +0.4 148,814 - EX31_RS22020 0.13 -0.4 148,814 - EX31_RS22020 0.13 +0.9 148,825 + EX31_RS22020 0.15 +1.4 148,826 - EX31_RS22020 0.15 +0.2 148,984 + EX31_RS22020 0.36 +0.2 149,006 + EX31_RS22020 0.38 +0.6 149,007 - EX31_RS22020 0.39 +0.8 149,053 - EX31_RS22020 0.45 +1.4 149,119 + EX31_RS22020 0.53 +0.5 149,137 + EX31_RS22020 0.56 +0.9 149,137 + EX31_RS22020 0.56 +1.4 149,137 + EX31_RS22020 0.56 -0.3 149,137 + EX31_RS22020 0.56 +0.1 149,138 - EX31_RS22020 0.56 -0.6 149,138 - EX31_RS22020 0.56 +0.2 149,138 - EX31_RS22020 0.56 +0.8 149,138 - EX31_RS22020 0.56 +0.9 149,253 - EX31_RS22020 0.71 -0.2 149,451 - -0.6 149,451 - +0.9 149,498 + +0.7 149,499 - -1.1 149,559 - +0.9 149,604 - EX31_RS22025 0.11 +1.9 149,604 - EX31_RS22025 0.11 -2.5 149,604 - EX31_RS22025 0.11 +1.3 149,686 - EX31_RS22025 0.20 +0.4 149,724 - EX31_RS22025 0.23 +0.4 149,828 + EX31_RS22025 0.34 +0.7 149,828 + EX31_RS22025 0.34 -1.9 149,829 - EX31_RS22025 0.34 -0.1 149,829 - EX31_RS22025 0.34 -2.2 149,829 - EX31_RS22025 0.34 -0.3 149,829 - EX31_RS22025 0.34 +1.4 149,904 + EX31_RS22025 0.41 +0.9 149,904 + EX31_RS22025 0.41 +1.4 149,904 + EX31_RS22025 0.41 +1.9 149,904 + EX31_RS22025 0.41 +0.0 149,904 + EX31_RS22025 0.41 -0.1 149,904 + EX31_RS22025 0.41 +0.1 149,904 + EX31_RS22025 0.41 +0.9 149,904 + EX31_RS22025 0.41 -1.1 149,905 - EX31_RS22025 0.41 +0.4 149,905 - EX31_RS22025 0.41 -0.1 149,905 - EX31_RS22025 0.41 +2.3 149,905 - EX31_RS22025 0.41 -0.6 149,905 - EX31_RS22025 0.41 -0.2 149,905 - EX31_RS22025 0.41 -0.6 149,905 - EX31_RS22025 0.41 -0.6 149,907 - EX31_RS22025 0.41 +0.9 149,907 - EX31_RS22025 0.41 -0.8 149,907 - EX31_RS22025 0.41 +0.9 149,908 + EX31_RS22025 0.41 -0.4 149,908 + EX31_RS22025 0.41 -0.6 149,908 + EX31_RS22025 0.41 -0.1 149,908 + EX31_RS22025 0.41 +0.8 149,908 + EX31_RS22025 0.41 -1.1 149,909 - EX31_RS22025 0.42 -0.6 149,909 - EX31_RS22025 0.42 -2.0 150,003 + EX31_RS22025 0.51 -0.6 150,072 + EX31_RS22025 0.58 +0.8 150,072 + EX31_RS22025 0.58 +1.2 150,072 + EX31_RS22025 0.58 -1.0 150,073 - EX31_RS22025 0.58 -0.1 150,073 - EX31_RS22025 0.58 -2.7 150,073 - EX31_RS22025 0.58 +1.8 150,112 + EX31_RS22025 0.62 +0.7 150,113 - EX31_RS22025 0.62 +0.0 150,113 - EX31_RS22025 0.62 +0.1 150,123 + EX31_RS22025 0.63 -0.9 150,123 + EX31_RS22025 0.63 -0.5 150,124 - EX31_RS22025 0.63 +0.7 150,139 - EX31_RS22025 0.64 +1.3 150,329 + EX31_RS22025 0.83 +1.0 150,329 + EX31_RS22025 0.83 +0.3 150,329 + EX31_RS22025 0.83 +0.5 150,329 + EX31_RS22025 0.83 -0.6 150,329 + EX31_RS22025 0.83 -2.2 150,329 + EX31_RS22025 0.83 +2.1 150,329 + EX31_RS22025 0.83 -1.4 150,329 + EX31_RS22025 0.83 +0.1 150,329 + EX31_RS22025 0.83 -0.5 150,330 - EX31_RS22025 0.83 -0.3 150,330 - EX31_RS22025 0.83 -0.6 150,330 - EX31_RS22025 0.83 +0.2 150,330 - EX31_RS22025 0.83 +0.9 150,330 - EX31_RS22025 0.83 +0.4 150,330 - EX31_RS22025 0.83 -1.1 150,522 - +0.2 150,541 + +1.9 150,541 + +0.4 150,542 - -0.6 150,542 - +0.5 150,553 + +0.9 150,553 + -1.2 150,553 + -0.7 150,554 - +0.2 150,554 - -0.1 150,554 - -0.9 150,554 - +0.6 150,555 + -0.7 150,555 + +2.9 150,555 + +3.5 150,555 + +0.9 150,555 + +0.7 150,555 + +1.4 150,555 + -0.1 150,555 + -1.4 150,555 + +2.4 150,555 + +1.4 150,555 + +0.4 150,555 + +1.4 150,556 - -1.0 150,556 - +0.1 150,556 - +0.6 150,556 - -1.4 150,556 - +0.0 150,556 - +0.1 150,556 - +0.2 150,556 - -0.4 150,556 - +0.4 150,556 - -1.1 150,556 - -0.5 150,556 - +0.0 150,559 + +1.8 150,559 + +1.6 150,559 + +0.9 150,560 - -0.1 150,560 - +2.4 150,758 + -0.4 150,974 + +0.2 151,130 - EX31_RS22030 0.12 -0.4 151,168 + EX31_RS22030 0.13 +1.9 151,168 + EX31_RS22030 0.13 -0.1 151,169 - EX31_RS22030 0.13 +0.1 151,169 - EX31_RS22030 0.13 +0.1 151,169 - EX31_RS22030 0.13 -0.2 151,169 - EX31_RS22030 0.13 +1.9 151,169 - EX31_RS22030 0.13 +1.2 151,169 - EX31_RS22030 0.13 +0.1 151,169 - EX31_RS22030 0.13 +0.4 151,249 + EX31_RS22030 0.15 +0.7
Or see this region's nucleotide sequence