Strain Fitness in Escherichia coli BL21 around ECD_01735

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01733 and ECD_01734 are separated by 116 nucleotidesECD_01734 and ECD_01735 are separated by 160 nucleotidesECD_01735 and ECD_01736 are separated by 166 nucleotides ECD_01733: ECD_01733 - selenophosphate synthase, at 1,791,341 to 1,792,384 _01733 ECD_01734: ECD_01734 - putative oxidoreductase, at 1,792,501 to 1,793,052 _01734 ECD_01735: ECD_01735 - protease IV (signal peptide peptidase), at 1,793,213 to 1,795,069 _01735 ECD_01736: ECD_01736 - cytoplasmic L-asparaginase 1, at 1,795,236 to 1,796,252 _01736 Position (kb) 1793 1794 1795 1796Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1792.354 kb on - strandat 1792.509 kb on - strandat 1792.548 kb on + strandat 1793.036 kb on - strandat 1793.210 kb on + strandat 1794.035 kb on + strand, within ECD_01735at 1794.565 kb on + strand, within ECD_01735at 1794.667 kb on + strand, within ECD_01735at 1794.769 kb on + strand, within ECD_01735at 1795.197 kb on - strandat 1795.226 kb on + strandat 1795.305 kb on + strandat 1795.306 kb on - strandat 1795.308 kb on - strandat 1795.328 kb on - strandat 1795.397 kb on + strand, within ECD_01736at 1795.521 kb on + strand, within ECD_01736at 1795.793 kb on + strand, within ECD_01736at 1796.054 kb on + strand, within ECD_01736

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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1,792,354 - +2.0
1,792,509 - -1.1
1,792,548 + +1.5
1,793,036 - -0.4
1,793,210 + -0.9
1,794,035 + ECD_01735 0.44 -0.6
1,794,565 + ECD_01735 0.73 -0.1
1,794,667 + ECD_01735 0.78 -2.1
1,794,769 + ECD_01735 0.84 -0.0
1,795,197 - +1.3
1,795,226 + -1.8
1,795,305 + +1.5
1,795,306 - -0.4
1,795,308 - -1.1
1,795,328 - -0.4
1,795,397 + ECD_01736 0.16 +0.6
1,795,521 + ECD_01736 0.28 +3.1
1,795,793 + ECD_01736 0.55 +0.7
1,796,054 + ECD_01736 0.80 -0.6

Or see this region's nucleotide sequence