Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00707 and ECD_00708 are separated by 157 nucleotides
ECD_00707: ECD_00707 - 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible, at 744,041 to 745,093
_00707
ECD_00708: ECD_00708 - phosphoglyceromutase 1, at 745,251 to 746,003
_00708
Position (kb) 745
746
747 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 744.254 kb on + strand, within ECD_00707 at 744.382 kb on + strand, within ECD_00707 at 744.385 kb on + strand, within ECD_00707 at 744.385 kb on + strand, within ECD_00707 at 744.385 kb on + strand, within ECD_00707 at 744.494 kb on + strand, within ECD_00707 at 744.761 kb on + strand, within ECD_00707 at 744.998 kb on + strand at 745.039 kb on + strand at 745.053 kb on + strand at 745.194 kb on - strand at 745.253 kb on - strand at 745.319 kb on - strand at 745.383 kb on - strand, within ECD_00708 at 745.386 kb on - strand, within ECD_00708 at 745.499 kb on + strand, within ECD_00708 at 745.878 kb on - strand, within ECD_00708 at 745.878 kb on - strand, within ECD_00708 at 745.928 kb on - strand at 745.992 kb on - strand at 746.004 kb on - strand at 746.006 kb on - strand at 746.010 kb on - strand at 746.010 kb on - strand at 746.079 kb on - strand at 746.112 kb on + strand at 746.172 kb on - strand at 746.242 kb on + strand at 746.727 kb on - strand at 746.780 kb on + strand at 746.781 kb on - strand at 746.836 kb on - strand at 746.842 kb on + strand at 746.943 kb on + strand at 746.962 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 744,254 + ECD_00707 0.20 -1.0 744,382 + ECD_00707 0.32 +0.2 744,385 + ECD_00707 0.33 -0.9 744,385 + ECD_00707 0.33 +0.4 744,385 + ECD_00707 0.33 -0.3 744,494 + ECD_00707 0.43 +2.0 744,761 + ECD_00707 0.68 -1.1 744,998 + +0.2 745,039 + +0.9 745,053 + -0.2 745,194 - +0.8 745,253 - -1.4 745,319 - -2.2 745,383 - ECD_00708 0.18 -1.1 745,386 - ECD_00708 0.18 -1.8 745,499 + ECD_00708 0.33 -1.0 745,878 - ECD_00708 0.83 -2.3 745,878 - ECD_00708 0.83 -0.5 745,928 - -1.5 745,992 - -1.7 746,004 - -3.4 746,006 - -3.1 746,010 - -2.5 746,010 - -2.2 746,079 - +1.1 746,112 + -1.3 746,172 - +0.4 746,242 + -1.6 746,727 - +0.3 746,780 + -0.2 746,781 - +0.5 746,836 - -0.1 746,842 + +0.4 746,943 + +0.9 746,962 - -0.8
Or see this region's nucleotide sequence