Strain Fitness in Pseudomonas sp. RS175 around PFR28_01579

Experiment: D-(+)-Galactosamine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-(+)-Galactosamine (C) 10 mM
1,746,027	-				-0.1
1,746,054	+				+2.6
1,746,055	-				-1.0
1,746,055	-				-0.7
1,746,056	+				+0.4
1,746,056	+				+0.6
1,746,056	+				+0.6
1,746,056	+				+0.5
1,746,056	+				-0.3
1,746,057	-				-0.4
1,746,057	-				+0.9
1,746,057	-				-0.0
1,746,057	-				-0.2
1,746,058	+				+1.2
1,746,058	+				-1.6
1,746,058	+				+0.1
1,746,058	+				+1.2
1,746,058	+				+0.3
1,746,058	+				+2.1
1,746,058	+				+0.9
1,746,058	+				-1.0
1,746,058	+				+0.6
1,746,058	+				+1.8
1,746,058	+				-2.0
1,746,058	+				+1.2
1,746,058	+				-1.0
1,746,058	+				+0.1
1,746,058	+				-0.7
1,746,058	+				+0.7
1,746,058	+				+0.6
1,746,058	+				+1.0
1,746,058	+				+0.2
1,746,058	+				+0.3
1,746,058	+				+1.6
1,746,058	+				-0.3
1,746,058	+				-1.4
1,746,058	+				+0.3
1,746,058	+				-0.0
1,746,058	+				+0.5
1,746,058	+				-0.5
1,746,058	+				+0.3
1,746,058	+				-1.1
1,746,058	+				+0.7
1,746,058	+				-1.1
1,746,058	+				-0.7
1,746,058	+				-1.0
1,746,058	+				+0.0
1,746,058	+				+1.8
1,746,058	+				+0.1
1,746,059	-				+0.1
1,746,059	-				-0.2
1,746,059	-				+0.5
1,746,059	-				-0.6
1,746,059	-				+0.4
1,746,059	-				+0.2
1,746,059	-				-1.0
1,746,059	-				-1.2
1,746,059	-				+0.2
1,746,059	-				+1.3
1,746,059	-				-1.3
1,746,059	-				+0.7
1,746,059	-				-2.1
1,746,059	-				+0.6
1,746,059	-				-0.5
1,746,059	-				-0.0
1,746,059	-				-0.3
1,746,059	-				+1.1
1,746,059	-				-0.9
1,746,059	-				-1.6
1,746,059	-				+0.2
1,746,059	-				-0.8
1,746,059	-				+1.1
1,746,059	-				+0.7
1,746,059	-				-0.2
1,746,059	-				-0.5
1,746,059	-				-2.8
1,746,059	-				+1.3
1,746,062	+				-1.3
1,746,063	-				+0.2
1,746,063	-				+0.1
1,746,085	-				-0.2
1,746,085	-				+0.1
1,746,116	-				-1.3
1,746,116	-				-0.0
1,746,431	-		PFR28_01578	0.44	+1.4
1,746,640	+		PFR28_01578	0.73	+1.6
1,746,641	-		PFR28_01578	0.73	+1.5
1,746,641	-		PFR28_01578	0.73	+0.8
1,746,704	-		PFR28_01578	0.82	+2.1
1,746,704	-		PFR28_01578	0.82	+2.1
1,746,704	-		PFR28_01578	0.82	+2.5
1,746,704	-		PFR28_01578	0.82	+1.1
1,746,825	-				+0.7
1,746,857	-				+0.3
1,746,879	-				-0.5
1,746,879	-				+0.4
1,746,879	-				+1.2
1,746,930	+				+0.2
1,746,994	+				-1.6
1,746,995	-				-2.1
1,747,067	+				-1.3
1,747,067	+				+0.4
1,747,067	+				-0.5
1,747,067	+				+0.3
1,747,067	+				+1.9
1,747,068	-				+0.8
1,747,068	-				+0.8
1,747,068	-				-0.5
1,747,454	+		PFR28_01579	0.28	+0.7
1,747,454	+		PFR28_01579	0.28	-1.6
1,747,454	+		PFR28_01579	0.28	+0.4
1,747,454	+		PFR28_01579	0.28	-0.7
1,747,455	-		PFR28_01579	0.28	+0.5
1,747,455	-		PFR28_01579	0.28	-1.0
1,747,455	-		PFR28_01579	0.28	-0.7
1,747,628	+		PFR28_01579	0.38	+1.3
1,747,748	+		PFR28_01579	0.44	+0.9
1,747,748	+		PFR28_01579	0.44	+0.5
1,747,749	-		PFR28_01579	0.45	-2.1
1,747,751	+		PFR28_01579	0.45	-0.4
1,747,751	+		PFR28_01579	0.45	+2.3
1,747,751	+		PFR28_01579	0.45	+0.2
1,747,752	-		PFR28_01579	0.45	-0.1
1,748,007	+		PFR28_01579	0.59	+0.0
1,748,007	+		PFR28_01579	0.59	-1.0
1,748,007	+		PFR28_01579	0.59	-0.6
1,748,007	+		PFR28_01579	0.59	-0.5
1,748,007	+		PFR28_01579	0.59	-1.0
1,748,008	-		PFR28_01579	0.59	+0.7
1,748,008	-		PFR28_01579	0.59	-0.0
1,748,008	-		PFR28_01579	0.59	-0.0
1,748,021	+		PFR28_01579	0.60	-0.2
1,748,021	+		PFR28_01579	0.60	-1.9
1,748,021	+		PFR28_01579	0.60	-0.3
1,748,021	+		PFR28_01579	0.60	-0.3
1,748,022	-		PFR28_01579	0.60	+0.9
1,748,035	+		PFR28_01579	0.61	-0.2
1,748,035	+		PFR28_01579	0.61	+0.9
1,748,036	-		PFR28_01579	0.61	-0.2
1,748,568	+				+0.6
1,748,569	-				+0.4
1,748,642	+				+1.3
1,748,704	-				-1.7
1,748,757	+				+0.8
1,748,971	+				-1.0
1,748,972	-				-0.8
1,748,972	-				+0.3
1,749,055	+		PFR28_01580	0.11	-0.2
1,749,056	-		PFR28_01580	0.11	+0.0
1,749,056	-		PFR28_01580	0.11	+1.8
1,749,212	-		PFR28_01580	0.23	-1.7
1,749,220	+		PFR28_01580	0.24	-0.5
1,749,220	+		PFR28_01580	0.24	-0.3
1,749,220	+		PFR28_01580	0.24	+0.2
1,749,220	+		PFR28_01580	0.24	-3.6
1,749,221	-		PFR28_01580	0.24	-1.4
1,749,221	-		PFR28_01580	0.24	-0.2
1,749,221	-		PFR28_01580	0.24	+0.7
1,749,221	-		PFR28_01580	0.24	-0.4
1,749,277	+		PFR28_01580	0.28	+1.2
1,749,277	+		PFR28_01580	0.28	-1.1
1,749,277	+		PFR28_01580	0.28	-0.2
1,749,277	+		PFR28_01580	0.28	-0.1
1,749,277	+		PFR28_01580	0.28	+0.3
1,749,278	-		PFR28_01580	0.28	+0.2
1,749,278	-		PFR28_01580	0.28	+0.7
1,749,280	+		PFR28_01580	0.28	+0.7
1,749,280	+		PFR28_01580	0.28	+1.0
1,749,280	+		PFR28_01580	0.28	-1.4
1,749,280	+		PFR28_01580	0.28	+1.8
1,749,280	+		PFR28_01580	0.28	+0.4
1,749,280	+		PFR28_01580	0.28	+0.2
1,749,281	-		PFR28_01580	0.28	+1.1
1,749,281	-		PFR28_01580	0.28	-0.2
1,749,281	-		PFR28_01580	0.28	+0.7
1,749,281	-		PFR28_01580	0.28	-0.3
1,749,281	-		PFR28_01580	0.28	-2.3
1,749,281	-		PFR28_01580	0.28	+1.6
1,749,281	-		PFR28_01580	0.28	+0.2
1,749,281	-		PFR28_01580	0.28	-0.4
1,749,374	+		PFR28_01580	0.35	-2.9
1,749,374	+		PFR28_01580	0.35	-0.5
1,749,574	+		PFR28_01580	0.51	-0.1
1,749,574	+		PFR28_01580	0.51	-1.5
1,749,575	-		PFR28_01580	0.51	-0.7
1,749,575	-		PFR28_01580	0.51	-1.6
1,749,646	+		PFR28_01580	0.56	-0.1
1,749,646	+		PFR28_01580	0.56	-0.7
1,749,646	+		PFR28_01580	0.56	-0.3
1,749,646	+		PFR28_01580	0.56	+1.8
1,749,646	+		PFR28_01580	0.56	-0.1
1,749,647	-		PFR28_01580	0.56	-0.7
1,749,647	-		PFR28_01580	0.56	+0.4
1,749,670	+		PFR28_01580	0.58	+1.1