Strain Fitness in Escherichia coli BL21 around ECD_03723

Experiment: lambda1857_phage_12.5_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03721 and ECD_03722 are separated by 24 nucleotidesECD_03722 and ECD_03723 overlap by 11 nucleotidesECD_03723 and ECD_03724 are separated by 23 nucleotides ECD_03721: ECD_03721 - hypothetical protein, at 3,920,614 to 3,921,588 _03721 ECD_03722: ECD_03722 - hypothetical protein, at 3,921,613 to 3,922,242 _03722 ECD_03723: ECD_03723 - hypothetical protein, at 3,922,232 to 3,923,236 _03723 ECD_03724: ECD_03724 - putative transcriptional regulator, at 3,923,260 to 3,924,027 _03724 Position (kb) 3922 3923 3924Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3921.372 kb on + strand, within ECD_03721at 3921.462 kb on - strand, within ECD_03721at 3921.545 kb on - strandat 3921.574 kb on - strandat 3921.695 kb on + strand, within ECD_03722at 3921.696 kb on - strand, within ECD_03722at 3921.697 kb on + strand, within ECD_03722at 3921.697 kb on + strand, within ECD_03722at 3921.697 kb on + strand, within ECD_03722at 3921.697 kb on + strand, within ECD_03722at 3921.698 kb on - strand, within ECD_03722at 3921.867 kb on + strand, within ECD_03722at 3921.867 kb on + strand, within ECD_03722at 3921.868 kb on - strand, within ECD_03722at 3921.926 kb on + strand, within ECD_03722at 3921.926 kb on + strand, within ECD_03722at 3921.926 kb on + strand, within ECD_03722at 3921.926 kb on + strand, within ECD_03722at 3921.926 kb on + strand, within ECD_03722at 3921.926 kb on + strand, within ECD_03722at 3921.926 kb on + strand, within ECD_03722at 3921.927 kb on - strand, within ECD_03722at 3921.927 kb on - strand, within ECD_03722at 3921.927 kb on - strand, within ECD_03722at 3921.927 kb on - strand, within ECD_03722at 3921.927 kb on - strand, within ECD_03722at 3921.927 kb on - strand, within ECD_03722at 3921.930 kb on + strand, within ECD_03722at 3921.930 kb on + strand, within ECD_03722at 3921.930 kb on + strand, within ECD_03722at 3921.931 kb on - strand, within ECD_03722at 3921.931 kb on - strand, within ECD_03722at 3922.090 kb on - strand, within ECD_03722at 3922.090 kb on - strand, within ECD_03722at 3922.116 kb on + strand, within ECD_03722at 3922.195 kb on + strandat 3922.231 kb on - strandat 3922.246 kb on + strandat 3922.246 kb on + strandat 3922.247 kb on - strandat 3922.247 kb on - strandat 3922.247 kb on - strandat 3922.247 kb on - strandat 3922.247 kb on - strandat 3922.299 kb on - strandat 3922.331 kb on + strandat 3922.331 kb on + strandat 3922.332 kb on - strandat 3922.424 kb on + strand, within ECD_03723at 3922.425 kb on - strand, within ECD_03723at 3922.434 kb on - strand, within ECD_03723at 3922.457 kb on + strand, within ECD_03723at 3922.457 kb on + strand, within ECD_03723at 3922.458 kb on - strand, within ECD_03723at 3922.458 kb on - strand, within ECD_03723at 3922.458 kb on - strand, within ECD_03723at 3922.458 kb on - strand, within ECD_03723at 3922.469 kb on + strand, within ECD_03723at 3922.469 kb on + strand, within ECD_03723at 3922.470 kb on - strand, within ECD_03723at 3922.489 kb on - strand, within ECD_03723at 3922.489 kb on - strand, within ECD_03723at 3922.510 kb on + strand, within ECD_03723at 3922.510 kb on + strand, within ECD_03723at 3922.510 kb on + strand, within ECD_03723at 3922.516 kb on + strand, within ECD_03723at 3922.517 kb on - strand, within ECD_03723at 3922.679 kb on + strand, within ECD_03723at 3922.730 kb on + strand, within ECD_03723at 3922.763 kb on + strand, within ECD_03723at 3922.819 kb on + strand, within ECD_03723at 3922.877 kb on - strand, within ECD_03723at 3922.970 kb on + strand, within ECD_03723at 3922.974 kb on + strand, within ECD_03723at 3922.974 kb on + strand, within ECD_03723at 3922.974 kb on + strand, within ECD_03723at 3922.974 kb on + strand, within ECD_03723at 3922.974 kb on + strand, within ECD_03723at 3922.974 kb on + strand, within ECD_03723at 3922.975 kb on - strand, within ECD_03723at 3922.975 kb on - strand, within ECD_03723at 3922.975 kb on - strand, within ECD_03723at 3922.975 kb on - strand, within ECD_03723at 3923.115 kb on - strand, within ECD_03723at 3923.216 kb on - strandat 3923.216 kb on - strandat 3923.238 kb on - strandat 3923.250 kb on + strandat 3923.261 kb on + strandat 3923.261 kb on + strandat 3923.262 kb on - strandat 3923.265 kb on + strandat 3923.330 kb on + strandat 3923.330 kb on + strandat 3923.330 kb on + strandat 3923.330 kb on + strandat 3923.331 kb on - strandat 3923.331 kb on - strandat 3923.331 kb on - strandat 3923.331 kb on - strandat 3923.331 kb on - strandat 3923.331 kb on - strandat 3923.364 kb on + strand, within ECD_03724at 3923.364 kb on + strand, within ECD_03724at 3923.364 kb on + strand, within ECD_03724at 3923.364 kb on + strand, within ECD_03724at 3923.364 kb on + strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.492 kb on + strand, within ECD_03724at 3923.682 kb on - strand, within ECD_03724at 3923.682 kb on - strand, within ECD_03724at 3923.732 kb on + strand, within ECD_03724at 3923.733 kb on - strand, within ECD_03724at 3923.858 kb on + strand, within ECD_03724at 3923.884 kb on + strand, within ECD_03724at 3923.954 kb on + strandat 3923.954 kb on + strandat 3923.955 kb on - strandat 3923.955 kb on - strandat 3923.964 kb on + strandat 3923.964 kb on + strandat 3923.965 kb on - strandat 3923.984 kb on - strandat 3923.984 kb on - strandat 3923.984 kb on - strandat 3923.986 kb on + strandat 3923.986 kb on + strandat 3923.987 kb on - strandat 3923.987 kb on - strandat 3924.045 kb on - strandat 3924.064 kb on + strandat 3924.065 kb on - strandat 3924.065 kb on - strandat 3924.065 kb on - strandat 3924.065 kb on - strandat 3924.065 kb on - strandat 3924.065 kb on - strandat 3924.195 kb on - strandat 3924.195 kb on - strandat 3924.207 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction lambda1857_phage_12.5_MOI
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3,921,372 + ECD_03721 0.78 +0.2
3,921,462 - ECD_03721 0.87 +0.5
3,921,545 - +1.2
3,921,574 - -0.1
3,921,695 + ECD_03722 0.13 +0.8
3,921,696 - ECD_03722 0.13 +0.3
3,921,697 + ECD_03722 0.13 -2.4
3,921,697 + ECD_03722 0.13 +0.1
3,921,697 + ECD_03722 0.13 -2.1
3,921,697 + ECD_03722 0.13 +0.3
3,921,698 - ECD_03722 0.13 -2.9
3,921,867 + ECD_03722 0.40 +1.0
3,921,867 + ECD_03722 0.40 +1.3
3,921,868 - ECD_03722 0.40 +0.1
3,921,926 + ECD_03722 0.50 +1.2
3,921,926 + ECD_03722 0.50 +0.2
3,921,926 + ECD_03722 0.50 -0.3
3,921,926 + ECD_03722 0.50 +0.4
3,921,926 + ECD_03722 0.50 +0.4
3,921,926 + ECD_03722 0.50 -0.2
3,921,926 + ECD_03722 0.50 +0.2
3,921,927 - ECD_03722 0.50 -0.0
3,921,927 - ECD_03722 0.50 +0.7
3,921,927 - ECD_03722 0.50 -0.6
3,921,927 - ECD_03722 0.50 +0.7
3,921,927 - ECD_03722 0.50 +1.0
3,921,927 - ECD_03722 0.50 +0.3
3,921,930 + ECD_03722 0.50 -0.6
3,921,930 + ECD_03722 0.50 -0.1
3,921,930 + ECD_03722 0.50 +0.8
3,921,931 - ECD_03722 0.50 -1.7
3,921,931 - ECD_03722 0.50 -2.1
3,922,090 - ECD_03722 0.76 -0.2
3,922,090 - ECD_03722 0.76 +1.1
3,922,116 + ECD_03722 0.80 +1.0
3,922,195 + -0.7
3,922,231 - +0.8
3,922,246 + +0.5
3,922,246 + +0.7
3,922,247 - -0.0
3,922,247 - +1.4
3,922,247 - -1.3
3,922,247 - +0.5
3,922,247 - -1.1
3,922,299 - +0.5
3,922,331 + -1.3
3,922,331 + -2.5
3,922,332 - -2.2
3,922,424 + ECD_03723 0.19 -0.6
3,922,425 - ECD_03723 0.19 +0.1
3,922,434 - ECD_03723 0.20 -0.2
3,922,457 + ECD_03723 0.22 -1.5
3,922,457 + ECD_03723 0.22 +0.1
3,922,458 - ECD_03723 0.22 -1.2
3,922,458 - ECD_03723 0.22 -0.1
3,922,458 - ECD_03723 0.22 +0.3
3,922,458 - ECD_03723 0.22 -0.7
3,922,469 + ECD_03723 0.24 -3.2
3,922,469 + ECD_03723 0.24 -1.0
3,922,470 - ECD_03723 0.24 +0.5
3,922,489 - ECD_03723 0.26 +1.0
3,922,489 - ECD_03723 0.26 +0.6
3,922,510 + ECD_03723 0.28 -1.0
3,922,510 + ECD_03723 0.28 +1.7
3,922,510 + ECD_03723 0.28 -0.7
3,922,516 + ECD_03723 0.28 -0.7
3,922,517 - ECD_03723 0.28 +0.4
3,922,679 + ECD_03723 0.44 -0.7
3,922,730 + ECD_03723 0.50 +0.8
3,922,763 + ECD_03723 0.53 -0.2
3,922,819 + ECD_03723 0.58 +0.3
3,922,877 - ECD_03723 0.64 +1.2
3,922,970 + ECD_03723 0.73 +0.9
3,922,974 + ECD_03723 0.74 +1.4
3,922,974 + ECD_03723 0.74 -2.3
3,922,974 + ECD_03723 0.74 +1.4
3,922,974 + ECD_03723 0.74 -0.6
3,922,974 + ECD_03723 0.74 +1.0
3,922,974 + ECD_03723 0.74 +1.0
3,922,975 - ECD_03723 0.74 +1.5
3,922,975 - ECD_03723 0.74 -0.4
3,922,975 - ECD_03723 0.74 +1.0
3,922,975 - ECD_03723 0.74 -0.9
3,923,115 - ECD_03723 0.88 +0.3
3,923,216 - +0.1
3,923,216 - -1.5
3,923,238 - +1.2
3,923,250 + -0.3
3,923,261 + -2.4
3,923,261 + +2.0
3,923,262 - +1.1
3,923,265 + +1.8
3,923,330 + +0.9
3,923,330 + +0.1
3,923,330 + -0.1
3,923,330 + +1.3
3,923,331 - -0.2
3,923,331 - +1.3
3,923,331 - -0.3
3,923,331 - +1.6
3,923,331 - -2.1
3,923,331 - +0.5
3,923,364 + ECD_03724 0.14 +0.1
3,923,364 + ECD_03724 0.14 +0.9
3,923,364 + ECD_03724 0.14 +1.1
3,923,364 + ECD_03724 0.14 +0.4
3,923,364 + ECD_03724 0.14 -1.3
3,923,365 - ECD_03724 0.14 -0.5
3,923,365 - ECD_03724 0.14 +0.3
3,923,365 - ECD_03724 0.14 -1.5
3,923,365 - ECD_03724 0.14 +0.6
3,923,365 - ECD_03724 0.14 +1.6
3,923,365 - ECD_03724 0.14 +1.4
3,923,365 - ECD_03724 0.14 +1.0
3,923,366 + ECD_03724 0.14 +0.6
3,923,366 + ECD_03724 0.14 -1.5
3,923,366 + ECD_03724 0.14 -0.7
3,923,366 + ECD_03724 0.14 -0.1
3,923,366 + ECD_03724 0.14 -0.2
3,923,366 + ECD_03724 0.14 +0.0
3,923,366 + ECD_03724 0.14 -0.3
3,923,366 + ECD_03724 0.14 -1.2
3,923,366 + ECD_03724 0.14 +2.6
3,923,366 + ECD_03724 0.14 +1.4
3,923,366 + ECD_03724 0.14 -1.8
3,923,366 + ECD_03724 0.14 -1.2
3,923,366 + ECD_03724 0.14 -0.4
3,923,366 + ECD_03724 0.14 -1.4
3,923,366 + ECD_03724 0.14 +2.4
3,923,366 + ECD_03724 0.14 -0.9
3,923,366 + ECD_03724 0.14 +0.7
3,923,366 + ECD_03724 0.14 +0.8
3,923,366 + ECD_03724 0.14 +1.4
3,923,366 + ECD_03724 0.14 +0.0
3,923,366 + ECD_03724 0.14 +0.3
3,923,366 + ECD_03724 0.14 -3.8
3,923,367 - ECD_03724 0.14 -1.8
3,923,367 - ECD_03724 0.14 +0.0
3,923,367 - ECD_03724 0.14 -0.5
3,923,367 - ECD_03724 0.14 +0.6
3,923,367 - ECD_03724 0.14 -0.3
3,923,367 - ECD_03724 0.14 -0.9
3,923,367 - ECD_03724 0.14 +1.4
3,923,367 - ECD_03724 0.14 +0.4
3,923,367 - ECD_03724 0.14 +0.7
3,923,367 - ECD_03724 0.14 -2.6
3,923,367 - ECD_03724 0.14 +0.5
3,923,367 - ECD_03724 0.14 +2.8
3,923,492 + ECD_03724 0.30 +0.1
3,923,682 - ECD_03724 0.55 -3.5
3,923,682 - ECD_03724 0.55 -0.2
3,923,732 + ECD_03724 0.61 +0.3
3,923,733 - ECD_03724 0.62 +0.2
3,923,858 + ECD_03724 0.78 +0.3
3,923,884 + ECD_03724 0.81 -0.6
3,923,954 + -0.8
3,923,954 + -1.6
3,923,955 - +0.0
3,923,955 - -0.4
3,923,964 + -0.4
3,923,964 + +1.3
3,923,965 - +2.0
3,923,984 - -1.8
3,923,984 - -1.4
3,923,984 - +0.6
3,923,986 + +0.6
3,923,986 + -0.0
3,923,987 - -1.1
3,923,987 - +0.4
3,924,045 - -0.1
3,924,064 + +0.3
3,924,065 - -0.2
3,924,065 - +1.5
3,924,065 - -0.3
3,924,065 - -2.3
3,924,065 - +1.2
3,924,065 - +1.1
3,924,195 - +1.6
3,924,195 - -0.6
3,924,207 + -0.6

Or see this region's nucleotide sequence