Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4496

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
5,020,990	+		PfGW456L13_4494	0.39	+0.2
5,020,990	+		PfGW456L13_4494	0.39	-0.3
5,020,990	+		PfGW456L13_4494	0.39	+0.3
5,020,991	-		PfGW456L13_4494	0.39	+0.7
5,021,080	+		PfGW456L13_4494	0.48	+1.8
5,021,080	+		PfGW456L13_4494	0.48	-1.1
5,021,080	+		PfGW456L13_4494	0.48	-1.3
5,021,080	+		PfGW456L13_4494	0.48	-0.3
5,021,080	+		PfGW456L13_4494	0.48	+0.4
5,021,080	+		PfGW456L13_4494	0.48	+1.5
5,021,081	-		PfGW456L13_4494	0.48	-0.6
5,021,081	-		PfGW456L13_4494	0.48	+0.5
5,021,081	-		PfGW456L13_4494	0.48	+0.6
5,021,081	-		PfGW456L13_4494	0.48	+0.2
5,021,251	+		PfGW456L13_4494	0.67	-1.7
5,021,251	+		PfGW456L13_4494	0.67	+0.5
5,021,251	+		PfGW456L13_4494	0.67	-0.4
5,021,251	+		PfGW456L13_4494	0.67	+0.2
5,021,251	+		PfGW456L13_4494	0.67	-0.3
5,021,252	-		PfGW456L13_4494	0.67	+0.0
5,021,252	-		PfGW456L13_4494	0.67	-0.3
5,021,252	-		PfGW456L13_4494	0.67	+0.3
5,021,252	-		PfGW456L13_4494	0.67	+0.1
5,021,252	-		PfGW456L13_4494	0.67	-0.7
5,021,252	-		PfGW456L13_4494	0.67	-1.1
5,021,252	-				-0.6
5,021,252	-		PfGW456L13_4494	0.67	-0.3
5,021,252	-		PfGW456L13_4494	0.67	+0.1
5,021,263	+		PfGW456L13_4494	0.68	-1.1
5,021,394	+		PfGW456L13_4494	0.82	-1.8
5,021,395	-		PfGW456L13_4494	0.82	+0.4
5,021,524	+				+0.0
5,021,730	+		PfGW456L13_4495	0.20	+0.0
5,021,730	+		PfGW456L13_4495	0.20	+0.3
5,021,730	+		PfGW456L13_4495	0.20	+0.3
5,021,730	+		PfGW456L13_4495	0.20	+1.5
5,021,730	+		PfGW456L13_4495	0.20	-0.0
5,021,731	-		PfGW456L13_4495	0.20	+1.5
5,021,731	-		PfGW456L13_4495	0.20	-1.3
5,021,731	-		PfGW456L13_4495	0.20	-0.7
5,021,764	-		PfGW456L13_4495	0.33	-0.7
5,021,919	+				+0.6
5,021,919	+				-0.7
5,021,919	+				+0.5
5,021,919	+				-0.4
5,021,919	+				-0.5
5,021,919	+				-0.7
5,021,919	+				-0.1
5,021,919	+				-0.1
5,021,919	+				-0.6
5,021,919	+				+0.3
5,021,919	+				-1.0
5,021,919	+				+1.0
5,021,920	-				-0.8
5,021,920	-				+0.4
5,021,920	-				+1.3
5,021,920	-				-0.2
5,021,920	-				-0.1
5,021,920	-				+0.5
5,021,920	-				+1.0
5,021,925	+				+0.9
5,021,925	+				-1.1
5,021,925	+				+0.2
5,021,925	+				-0.1
5,021,926	-				-0.4
5,021,926	-				+0.6
5,021,926	-				-0.7
5,021,952	+				+0.2
5,021,965	+				+0.2
5,021,965	+				-1.0
5,021,965	+				+0.5
5,021,966	-				+0.0
5,021,966	-				-0.0
5,022,164	-		PfGW456L13_4496	0.17	-0.9
5,022,300	+		PfGW456L13_4496	0.29	-0.4
5,022,300	+		PfGW456L13_4496	0.29	-1.0
5,022,301	-		PfGW456L13_4496	0.29	-1.0
5,022,301	-		PfGW456L13_4496	0.29	+0.3
5,022,301	-		PfGW456L13_4496	0.29	-0.9
5,022,301	-		PfGW456L13_4496	0.29	-0.7
5,022,503	+		PfGW456L13_4496	0.47	+0.0
5,022,504	-		PfGW456L13_4496	0.47	-1.3
5,022,512	+		PfGW456L13_4496	0.48	-0.8
5,022,575	+		PfGW456L13_4496	0.53	+0.1
5,022,575	+		PfGW456L13_4496	0.53	-1.2
5,022,575	+		PfGW456L13_4496	0.53	-1.9
5,022,576	-		PfGW456L13_4496	0.53	+0.0
5,022,608	-		PfGW456L13_4496	0.56	+0.5
5,022,647	+		PfGW456L13_4496	0.60	-1.4
5,022,647	+		PfGW456L13_4496	0.60	+0.7
5,022,647	+		PfGW456L13_4496	0.60	-0.5
5,022,647	+		PfGW456L13_4496	0.60	-0.8
5,022,648	-		PfGW456L13_4496	0.60	+0.7
5,022,648	-		PfGW456L13_4496	0.60	-0.5
5,022,648	-		PfGW456L13_4496	0.60	+0.2
5,022,648	-		PfGW456L13_4496	0.60	-0.1
5,022,830	-		PfGW456L13_4496	0.76	-0.5
5,022,941	+		PfGW456L13_4496	0.86	-0.4
5,022,941	+		PfGW456L13_4496	0.86	-0.3
5,022,942	-		PfGW456L13_4496	0.86	-3.6
5,022,986	+		PfGW456L13_4496	0.90	-0.1
5,022,986	+		PfGW456L13_4496	0.90	+0.5
5,022,986	+		PfGW456L13_4496	0.90	-2.1
5,022,987	-		PfGW456L13_4496	0.90	-0.7
5,023,069	-				+0.0
5,023,134	+				-0.4
5,023,134	+				+0.3
5,023,134	+				+1.2
5,023,134	+				-1.0
5,023,134	+				-0.2
5,023,134	+				+0.4
5,023,134	+				-0.1
5,023,134	+				+0.7
5,023,134	+				+0.8
5,023,134	+				-0.5
5,023,134	+				+0.7
5,023,134	+				+0.4
5,023,134	+				+0.5
5,023,135	-				-0.2
5,023,135	-				+0.2
5,023,135	-				+0.2
5,023,135	-				-0.1
5,023,135	-				+0.3
5,023,135	-				+0.4
5,023,135	-				-1.3
5,023,135	-				+0.7
5,023,135	-				+0.2
5,023,135	-				-1.0
5,023,135	-				-1.0
5,023,135	-				-0.9
5,023,135	-				+0.1
5,023,135	-				-1.2
5,023,136	+				+0.1
5,023,136	+				+0.0
5,023,136	+				-1.2
5,023,136	+				-2.0
5,023,136	+				+0.2
5,023,136	+				-0.3
5,023,136	+				+0.3
5,023,136	+				+0.2
5,023,136	+				+0.6
5,023,136	+				-0.4
5,023,136	+				+0.1
5,023,136	+				+0.2
5,023,136	+				-1.3
5,023,136	+				+1.4
5,023,136	+				-0.6
5,023,136	+				-0.6
5,023,137	-				+0.7
5,023,137	-				+0.4
5,023,137	-				-0.8
5,023,137	-				-1.0
5,023,137	-				-0.3
5,023,137	-				-1.1
5,023,137	-				-0.2
5,023,137	-				-0.8
5,023,137	-				-0.6
5,023,137	-				+1.1
5,023,137	-				+0.1
5,023,137	-				+1.1
5,023,137	-				+0.9
5,023,137	-				-1.1
5,023,137	-				-1.8
5,023,137	-				-0.6
5,023,137	-				-0.7
5,023,137	-				+0.6
5,023,137	-				-0.2
5,023,137	-				-3.0
5,023,137	-				-0.1
5,023,137	-				+0.1
5,023,138	+				+0.2
5,023,138	+				+0.1
5,023,138	+				+0.0
5,023,138	+				+0.0
5,023,138	+				-0.3
5,023,138	+				+0.7
5,023,139	-				-0.3
5,023,139	-				-0.3
5,023,139	-				-0.7
5,023,139	-				-1.3
5,023,139	-				+0.4
5,023,203	+				-0.6
5,023,204	-				-0.1
5,023,204	-				+1.3
5,023,210	+				+0.4
5,023,210	+				-0.9
5,023,210	+				+0.3
5,023,210	+				-0.7
5,023,211	-				-0.5
5,023,211	-				+0.1
5,023,211	-				-0.9
5,023,216	+				+1.6
5,023,216	+				+1.4
5,023,217	-				-0.5
5,023,217	-				+0.3
5,023,217	-				+0.2
5,023,217	-				+0.2
5,023,217	-				+0.0
5,023,229	+				+0.2
5,023,229	+				+0.1
5,023,229	+				-1.1
5,023,230	-				+0.1
5,023,230	-				+0.9
5,023,230	-				-0.7
5,023,230	-				-0.8
5,023,239	+				-1.3
5,023,352	+				+1.0
5,023,352	+				+1.6
5,023,407	+				+0.2
5,023,408	-				+0.5
5,023,408	-				+0.7
5,023,408	-				-0.8
5,023,505	+		PfGW456L13_4497	0.10	+0.6
5,023,505	+		PfGW456L13_4497	0.10	+0.5
5,023,505	+		PfGW456L13_4497	0.10	+0.8
5,023,506	-		PfGW456L13_4497	0.10	+1.8
5,023,506	-		PfGW456L13_4497	0.10	-0.6
5,023,506	-		PfGW456L13_4497	0.10	-0.2
5,023,522	+		PfGW456L13_4497	0.11	-0.4
5,023,522	+		PfGW456L13_4497	0.11	+0.5
5,023,522	+		PfGW456L13_4497	0.11	-0.4
5,023,523	-		PfGW456L13_4497	0.11	-0.0
5,023,523	-		PfGW456L13_4497	0.11	-0.6
5,023,524	+		PfGW456L13_4497	0.11	-0.7
5,023,525	-		PfGW456L13_4497	0.11	+0.4
5,023,584	+		PfGW456L13_4497	0.15	-0.4
5,023,584	+		PfGW456L13_4497	0.15	+0.9
5,023,584	+		PfGW456L13_4497	0.15	+0.2
5,023,584	+		PfGW456L13_4497	0.15	-0.1
5,023,584	+		PfGW456L13_4497	0.15	-0.1
5,023,584	+		PfGW456L13_4497	0.15	+0.6
5,023,584	+		PfGW456L13_4497	0.15	+0.0
5,023,584	+		PfGW456L13_4497	0.15	-0.6
5,023,585	-		PfGW456L13_4497	0.15	+0.9
5,023,585	-		PfGW456L13_4497	0.15	-1.3
5,023,585	-		PfGW456L13_4497	0.15	+1.2
5,023,585	-		PfGW456L13_4497	0.15	-1.0
5,023,611	+		PfGW456L13_4497	0.17	+0.1
5,023,611	+		PfGW456L13_4497	0.17	+0.3
5,023,612	-		PfGW456L13_4497	0.17	+0.9
5,023,612	-		PfGW456L13_4497	0.17	-1.1
5,023,612	-		PfGW456L13_4497	0.17	-0.1
5,023,612	-		PfGW456L13_4497	0.17	-1.0
5,023,612	-		PfGW456L13_4497	0.17	-0.4
5,023,644	+		PfGW456L13_4497	0.19	-0.6
5,023,644	+		PfGW456L13_4497	0.19	+0.1
5,023,644	+		PfGW456L13_4497	0.19	+0.3
5,023,644	+		PfGW456L13_4497	0.19	-0.3
5,023,645	-		PfGW456L13_4497	0.19	+1.6
5,023,645	-		PfGW456L13_4497	0.19	-0.2
5,023,645	-		PfGW456L13_4497	0.19	+0.6
5,023,645	-		PfGW456L13_4497	0.19	+0.3
5,023,645	-		PfGW456L13_4497	0.19	+0.9
5,023,645	-		PfGW456L13_4497	0.19	-1.0
5,023,645	-		PfGW456L13_4497	0.19	+0.2
5,023,706	+		PfGW456L13_4497	0.22	+0.6
5,023,706	+		PfGW456L13_4497	0.22	+0.3
5,023,706	+		PfGW456L13_4497	0.22	-2.3
5,023,706	+		PfGW456L13_4497	0.22	-0.4
5,023,706	+		PfGW456L13_4497	0.22	+0.6
5,023,706	+		PfGW456L13_4497	0.22	+0.0
5,023,706	+		PfGW456L13_4497	0.22	+0.5
5,023,706	+		PfGW456L13_4497	0.22	-1.1
5,023,706	+		PfGW456L13_4497	0.22	+0.4
5,023,706	+		PfGW456L13_4497	0.22	-0.4
5,023,706	+		PfGW456L13_4497	0.22	+0.8
5,023,706	+		PfGW456L13_4497	0.22	-0.5
5,023,707	-		PfGW456L13_4497	0.22	+0.4
5,023,707	-		PfGW456L13_4497	0.22	-0.2
5,023,707	-		PfGW456L13_4497	0.22	-0.4
5,023,707	-		PfGW456L13_4497	0.22	+0.4
5,023,707	-		PfGW456L13_4497	0.22	-2.6
5,023,707	-		PfGW456L13_4497	0.22	+0.5
5,023,707	-		PfGW456L13_4497	0.22	-1.3
5,023,707	-		PfGW456L13_4497	0.22	-0.6
5,023,707	-		PfGW456L13_4497	0.22	+1.2
5,023,707	-		PfGW456L13_4497	0.22	+0.1
5,023,717	+		PfGW456L13_4497	0.23	+0.8
5,023,719	+		PfGW456L13_4497	0.23	-0.4
5,023,719	+		PfGW456L13_4497	0.23	+0.0
5,023,720	-				+0.0
5,023,720	-		PfGW456L13_4497	0.23	+0.2
5,023,720	-		PfGW456L13_4497	0.23	+0.6
5,023,720	-		PfGW456L13_4497	0.23	-0.2
5,023,720	-		PfGW456L13_4497	0.23	-2.6
5,023,720	-		PfGW456L13_4497	0.23	-1.7
5,023,720	-		PfGW456L13_4497	0.23	+1.0
5,023,750	+		PfGW456L13_4497	0.25	-0.1
5,023,751	-		PfGW456L13_4497	0.25	-0.0
5,023,751	-		PfGW456L13_4497	0.25	+0.7
5,023,751	-		PfGW456L13_4497	0.25	+0.5
5,023,751	-		PfGW456L13_4497	0.25	+0.8
5,023,781	-		PfGW456L13_4497	0.27	+1.6
5,023,833	+		PfGW456L13_4497	0.30	-0.4
5,023,833	+		PfGW456L13_4497	0.30	-0.6
5,023,834	-		PfGW456L13_4497	0.30	-0.9
5,023,834	-		PfGW456L13_4497	0.30	-1.8
5,023,834	-				+1.0
5,023,865	+		PfGW456L13_4497	0.32	-0.5
5,023,865	+		PfGW456L13_4497	0.32	-0.1
5,023,891	+		PfGW456L13_4497	0.34	+1.3
5,023,972	+		PfGW456L13_4497	0.38	+0.1
5,023,973	-		PfGW456L13_4497	0.39	-0.5
5,023,973	-		PfGW456L13_4497	0.39	-0.9
5,024,005	+		PfGW456L13_4497	0.40	+1.0
5,024,005	+		PfGW456L13_4497	0.40	-0.1
5,024,005	+		PfGW456L13_4497	0.40	-0.0
5,024,006	-		PfGW456L13_4497	0.41	+0.5