Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
5,537	-				-1.1
5,730	+				-0.6
5,732	+				+0.2
5,760	+				+0.0
5,760	+				+0.8
5,761	-				+0.3
5,761	-				-0.5
5,761	-				+0.5
5,761	-				+0.1
5,761	-				+0.0
5,779	+				-0.0
5,779	+				-0.5
5,779	+				-0.4
5,779	+				+0.6
5,779	+				-0.3
5,780	-				+0.4
5,780	-				+0.3
5,780	-				+0.7
5,780	-				+0.3
5,781	+				-0.3
5,781	+				+0.8
5,782	-				-0.3
5,843	+				+0.9
5,843	+				-0.1
5,843	+				-0.1
5,843	+				+0.3
5,843	+				+0.1
5,843	+				-0.5
5,844	-				+0.7
5,847	+				+0.4
5,847	+				+0.1
5,847	+				+0.4
5,847	+				+0.5
5,847	+				+1.3
5,847	+				+0.1
5,848	-				+0.8
5,848	-				+0.4
5,848	-				+0.2
5,848	-				-1.3
5,848	-				-0.2
5,848	-				+0.8
5,848	-				+0.0
5,848	-				-0.5
5,848	-				-0.4
5,848	-				-0.5
5,848	-				-0.4
5,855	-				-0.7
6,026	+		PfGW456L13_2	0.12	+0.2
6,118	-		PfGW456L13_2	0.18	+0.4
6,118	-		PfGW456L13_2	0.18	-0.5
6,118	-		PfGW456L13_2	0.18	+0.7
6,204	+		PfGW456L13_2	0.24	-0.7
6,204	+		PfGW456L13_2	0.24	+0.2
6,204	+		PfGW456L13_2	0.24	+0.9
6,204	+		PfGW456L13_2	0.24	+2.1
6,204	+		PfGW456L13_2	0.24	-0.5
6,205	-		PfGW456L13_2	0.24	+1.5
6,205	-		PfGW456L13_2	0.24	+0.1
6,205	-		PfGW456L13_2	0.24	-0.3
6,205	-		PfGW456L13_2	0.24	-0.1
6,205	-		PfGW456L13_2	0.24	+0.3
6,205	-		PfGW456L13_2	0.24	+1.0
6,205	-		PfGW456L13_2	0.24	+0.5
6,205	-		PfGW456L13_2	0.24	+1.4
6,320	+		PfGW456L13_2	0.32	-0.0
6,332	+		PfGW456L13_2	0.33	-0.1
6,332	+		PfGW456L13_2	0.33	+0.3
6,332	+		PfGW456L13_2	0.33	+0.3
6,332	+		PfGW456L13_2	0.33	+0.0
6,332	+		PfGW456L13_2	0.33	-0.4
6,332	+		PfGW456L13_2	0.33	-2.5
6,332	+		PfGW456L13_2	0.33	-0.1
6,332	+		PfGW456L13_2	0.33	-0.6
6,333	-		PfGW456L13_2	0.33	+2.0
6,333	-		PfGW456L13_2	0.33	-0.5
6,333	-		PfGW456L13_2	0.33	-0.0
6,333	-		PfGW456L13_2	0.33	+1.8
6,336	+		PfGW456L13_2	0.33	+1.6
6,337	-		PfGW456L13_2	0.33	+0.1
6,337	-		PfGW456L13_2	0.33	+0.6
6,523	-		PfGW456L13_2	0.45	+0.2
6,642	+		PfGW456L13_2	0.53	-0.3
6,642	+		PfGW456L13_2	0.53	+1.3
6,643	-		PfGW456L13_2	0.53	+0.3
6,648	+		PfGW456L13_2	0.54	+0.4
6,648	+		PfGW456L13_2	0.54	+0.8
6,648	+		PfGW456L13_2	0.54	-0.1
6,648	+		PfGW456L13_2	0.54	+0.5
6,648	+		PfGW456L13_2	0.54	-0.1
6,648	+		PfGW456L13_2	0.54	-0.2
6,648	+		PfGW456L13_2	0.54	+0.4
6,648	+		PfGW456L13_2	0.54	-0.6
6,648	+		PfGW456L13_2	0.54	+0.4
6,648	+		PfGW456L13_2	0.54	-0.3
6,648	+		PfGW456L13_2	0.54	-1.1
6,648	+		PfGW456L13_2	0.54	+1.4
6,649	-		PfGW456L13_2	0.54	+0.9
6,649	-		PfGW456L13_2	0.54	-1.4
6,649	-		PfGW456L13_2	0.54	-0.5
6,649	-		PfGW456L13_2	0.54	-0.5
6,649	-		PfGW456L13_2	0.54	+0.9
6,833	-		PfGW456L13_2	0.66	-1.0
6,864	+		PfGW456L13_2	0.68	+0.5
6,864	+		PfGW456L13_2	0.68	-0.6
6,864	+		PfGW456L13_2	0.68	+2.0
6,865	-		PfGW456L13_2	0.68	-0.3
6,975	+		PfGW456L13_2	0.76	-0.1
6,975	+		PfGW456L13_2	0.76	+0.6
6,976	-		PfGW456L13_2	0.76	+0.1
7,250	-				+1.0
7,331	-				-0.2
7,388	+				-0.2
7,388	+				-0.4
7,388	+				-0.5
7,388	+				-1.8
7,388	+				+0.4
7,388	+				-0.3
7,388	+				+0.2
7,388	+				+0.6
7,388	+				-1.0
7,388	+				-1.2
7,389	-				+0.6
7,389	-				+0.5
7,389	-				-0.5
7,389	-				+1.4
7,389	-				-0.2
7,389	-				-0.1
7,390	+				-0.1
7,390	+				+0.8
7,390	+				+0.5
7,390	+				-0.7
7,390	+				-1.4
7,390	+				+0.4
7,391	-				+0.6
7,391	-				+0.3
7,392	+				+0.2
7,392	+				-0.4
7,392	+				+0.6
7,392	+				+1.4
7,392	+				+0.4
7,392	+				-0.3
7,392	+				+0.1
7,392	+				+0.3
7,392	+				+0.6
7,392	+				+0.9
7,392	+				-1.1
7,392	+				+0.3
7,392	+				-0.2
7,392	+				-0.5
7,392	+				-0.5
7,392	+				-0.3
7,392	+				-0.7
7,392	+				-0.0
7,392	+				+0.7
7,392	+				+0.3
7,392	+				-0.2
7,392	+				+0.0
7,393	-				-0.2
7,393	-				-0.4
7,393	-				-0.3
7,393	-				+1.3
7,393	-				+0.7
7,393	-				-0.9
7,393	-				-0.5
7,393	-				-2.6
7,393	-				-0.1
7,393	-				+0.5
7,393	-				-0.1
7,393	-				+0.6
7,393	-				-0.3
7,393	-				+0.0
7,393	-				+0.9
7,393	-				-1.2
7,393	-				+0.3
7,393	-				+0.6
7,393	-				-0.3
7,393	-				+0.4
7,465	+				-0.6
7,472	+				+0.7
7,472	+				-0.9
7,473	-				-0.7
7,473	-				+1.1
7,499	+				-1.3
7,499	+				+0.3
7,499	+				-0.7
7,499	+				-0.4
7,500	-				+1.2
7,625	+				+0.4
7,625	+				-1.5
7,625	+				+1.0
7,625	+				-0.5
7,626	-				-0.5
7,626	-				-0.3
7,629	+				+0.8
7,629	+				+0.1
7,629	+				+0.4
7,629	+				-0.8
7,629	+				+0.4
7,629	+				+1.8
7,629	+				-0.2
7,630	-				-0.1
7,630	-				-1.7
7,630	-				-0.7
7,630	-				-0.7
7,630	-				+0.7
7,630	-				-0.4
7,630	-				-0.0
7,630	-				+0.4
7,630	-				+0.0
7,630	-				+1.8
7,630	-				-0.0
7,725	+		PfGW456L13_3	0.15	+0.4
7,726	-		PfGW456L13_3	0.15	+1.1
7,811	+		PfGW456L13_3	0.22	-0.0
7,881	+		PfGW456L13_3	0.27	-0.2
7,881	+		PfGW456L13_3	0.27	-0.2
7,881	+		PfGW456L13_3	0.27	+0.1
7,881	+		PfGW456L13_3	0.27	-0.2
7,882	-		PfGW456L13_3	0.27	+0.2
7,882	-		PfGW456L13_3	0.27	+0.5
7,882	-		PfGW456L13_3	0.27	-0.2
7,887	+		PfGW456L13_3	0.27	+0.1
7,944	+		PfGW456L13_3	0.32	-0.7
7,944	+				+0.4
7,944	+		PfGW456L13_3	0.32	-0.3
8,041	+		PfGW456L13_3	0.39	+0.4
8,081	+		PfGW456L13_3	0.42	+0.2
8,081	+		PfGW456L13_3	0.42	+0.4
8,081	+		PfGW456L13_3	0.42	-0.4
8,081	+		PfGW456L13_3	0.42	+0.7
8,081	+		PfGW456L13_3	0.42	+0.2
8,081	+		PfGW456L13_3	0.42	+0.7
8,081	+		PfGW456L13_3	0.42	+0.6
8,081	+		PfGW456L13_3	0.42	+0.6
8,081	+		PfGW456L13_3	0.42	+0.0
8,081	+		PfGW456L13_3	0.42	+0.3
8,082	-		PfGW456L13_3	0.42	-0.8
8,082	-		PfGW456L13_3	0.42	-0.3
8,082	-		PfGW456L13_3	0.42	+0.1
8,082	-		PfGW456L13_3	0.42	-1.3
8,082	-		PfGW456L13_3	0.42	+1.7
8,142	+		PfGW456L13_3	0.46	-0.9
8,143	-		PfGW456L13_3	0.46	+0.5
8,289	+		PfGW456L13_3	0.57	-0.3
8,290	-		PfGW456L13_3	0.57	+0.8
8,290	-		PfGW456L13_3	0.57	+0.5