Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07020

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
1,504,930	+				+0.0
1,504,930	+				+0.7
1,504,930	+				-1.2
1,504,931	-				-1.2
1,504,931	-				+0.8
1,504,931	-				-0.8
1,504,931	-				+0.7
1,504,931	-				-0.2
1,504,931	-				-1.3
1,504,931	-				-0.3
1,504,932	+				+1.0
1,504,932	+				+0.0
1,504,932	+				+0.3
1,504,932	+				+1.1
1,504,932	+				-0.2
1,504,932	+				+1.5
1,504,932	+				-1.1
1,504,932	+				+0.4
1,504,932	+				-1.0
1,504,932	+				-0.5
1,504,932	+				-0.3
1,504,933	-				-1.1
1,504,935	+				+0.7
1,504,935	+				+0.3
1,504,935	+				+0.2
1,504,935	+				-0.7
1,504,935	+				-0.5
1,504,935	+				-1.1
1,505,022	+				-0.5
1,505,299	-		LRK54_RS07015	0.35	-0.1
1,505,387	+		LRK54_RS07015	0.44	-0.3
1,505,388	-		LRK54_RS07015	0.44	-0.7
1,505,388	-		LRK54_RS07015	0.44	+0.3
1,506,108	-		LRK54_RS07020	0.23	-0.0
1,506,117	-		LRK54_RS07020	0.25	-0.5
1,506,117	-		LRK54_RS07020	0.25	-0.0
1,506,261	-		LRK54_RS07020	0.43	+1.3
1,506,457	+		LRK54_RS07020	0.68	-0.3
1,506,458	-		LRK54_RS07020	0.68	-1.5
1,506,501	-		LRK54_RS07020	0.74	-0.5
1,506,560	+		LRK54_RS07020	0.81	+0.3
1,506,816	+				+0.1
1,506,816	+				-0.2
1,506,816	+				-1.9
1,506,816	+				+2.3
1,506,816	+				-0.3
1,506,816	+				+0.1
1,506,816	+				+0.6
1,506,816	+				-2.4
1,506,816	+				-0.2
1,506,816	+				+1.3
1,506,816	+				-0.9
1,506,816	+				-0.1
1,506,816	+				+0.3
1,506,816	+				+0.1
1,506,816	+				-0.7
1,506,816	+				+0.6
1,506,816	+				-1.6
1,506,816	+				-0.4
1,506,816	+				+2.0
1,506,816	+				+0.3
1,506,816	+				-0.5
1,506,816	+				-0.5
1,506,816	+				+1.2
1,506,816	+				+0.4
1,506,816	+				-0.2
1,506,816	+				+2.3
1,506,816	+				+0.5
1,506,816	+				-0.1
1,506,816	+				+0.6
1,506,816	+				-0.4
1,506,817	-				+0.5
1,506,817	-				-0.5
1,506,817	-				+1.0
1,506,817	-				+1.6
1,506,817	-				+0.8
1,506,817	-				+0.4
1,506,817	-				-0.5
1,506,817	-				-1.1
1,506,817	-				-0.2
1,506,817	-				-0.5
1,506,817	-				-0.3
1,506,817	-				-1.0
1,506,817	-				+0.7
1,506,817	-				+1.7
1,506,817	-				-0.4
1,506,817	-				-0.3
1,506,817	-				+0.7
1,506,817	-				+0.1
1,506,817	-				+0.5
1,506,817	-				-1.1
1,506,817	-				+0.6
1,506,817	-				+0.1
1,506,817	-				-1.9
1,506,817	-				-0.7
1,506,817	-				-0.4
1,506,817	-				-0.3
1,506,817	-				+0.1
1,506,817	-				+1.8
1,506,817	-				+0.7
1,506,817	-				-0.7
1,506,817	-				-1.0
1,506,899	-		LRK54_RS07025	0.14	+0.7
1,507,005	+		LRK54_RS07025	0.28	+0.4
1,507,005	+		LRK54_RS07025	0.28	+0.1
1,507,005	+		LRK54_RS07025	0.28	+0.1
1,507,005	+		LRK54_RS07025	0.28	-0.6
1,507,005	+		LRK54_RS07025	0.28	-0.5
1,507,005	+		LRK54_RS07025	0.28	-0.4
1,507,005	+		LRK54_RS07025	0.28	+0.2
1,507,005	+		LRK54_RS07025	0.28	-0.8
1,507,005	+		LRK54_RS07025	0.28	+2.3
1,507,005	+		LRK54_RS07025	0.28	+0.6
1,507,005	+		LRK54_RS07025	0.28	+1.9
1,507,005	+		LRK54_RS07025	0.28	-0.1
1,507,005	+		LRK54_RS07025	0.28	-0.7
1,507,006	-		LRK54_RS07025	0.28	+0.2
1,507,006	-		LRK54_RS07025	0.28	-0.3
1,507,006	-		LRK54_RS07025	0.28	+0.7
1,507,006	-		LRK54_RS07025	0.28	-0.9
1,507,006	-		LRK54_RS07025	0.28	+0.5
1,507,006	-		LRK54_RS07025	0.28	-0.0
1,507,006	-		LRK54_RS07025	0.28	-0.7
1,507,006	-		LRK54_RS07025	0.28	-0.0
1,507,006	-		LRK54_RS07025	0.28	+0.0
1,507,006	-		LRK54_RS07025	0.28	+0.4
1,507,209	+		LRK54_RS07025	0.57	-0.4
1,507,209	+		LRK54_RS07025	0.57	-0.3
1,507,209	+		LRK54_RS07025	0.57	-0.0
1,507,209	+		LRK54_RS07025	0.57	-0.8
1,507,209	+		LRK54_RS07025	0.57	-0.1
1,507,209	+		LRK54_RS07025	0.57	+0.4
1,507,209	+		LRK54_RS07025	0.57	-0.7
1,507,209	+		LRK54_RS07025	0.57	-0.6
1,507,209	+		LRK54_RS07025	0.57	-2.3
1,507,209	+		LRK54_RS07025	0.57	-0.1
1,507,209	+		LRK54_RS07025	0.57	-0.6
1,507,209	+		LRK54_RS07025	0.57	+0.7
1,507,210	-		LRK54_RS07025	0.57	+0.9
1,507,210	-		LRK54_RS07025	0.57	+0.6
1,507,210	-		LRK54_RS07025	0.57	-0.9
1,507,210	-		LRK54_RS07025	0.57	+1.4
1,507,210	-		LRK54_RS07025	0.57	+0.7
1,507,210	-		LRK54_RS07025	0.57	-0.9
1,507,210	-		LRK54_RS07025	0.57	-0.1
1,507,210	-		LRK54_RS07025	0.57	+0.2
1,507,210	-		LRK54_RS07025	0.57	-1.1
1,507,210	-		LRK54_RS07025	0.57	-0.0
1,507,210	-		LRK54_RS07025	0.57	+0.8
1,507,210	-		LRK54_RS07025	0.57	-0.4
1,507,210	-		LRK54_RS07025	0.57	+0.2
1,507,210	-		LRK54_RS07025	0.57	+0.0
1,507,222	+		LRK54_RS07025	0.58	-0.8
1,507,222	+		LRK54_RS07025	0.58	+0.4
1,507,222	+		LRK54_RS07025	0.58	-0.1
1,507,223	-		LRK54_RS07025	0.59	-0.7
1,507,397	-		LRK54_RS07025	0.83	-2.0