Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS19970 and BPHYT_RS19975 are separated by 280 nucleotides BPHYT_RS19975 and BPHYT_RS19980 are separated by 29 nucleotides BPHYT_RS19980 and BPHYT_RS19985 are separated by 2 nucleotides
BPHYT_RS19970: BPHYT_RS19970 - tellurite resistance protein TehA, at 23,615 to 24,631
_RS19970
BPHYT_RS19975: BPHYT_RS19975 - IclR family transcriptional regulator, at 24,912 to 25,676
_RS19975
BPHYT_RS19980: BPHYT_RS19980 - citrate synthase, at 25,706 to 26,530
_RS19980
BPHYT_RS19985: BPHYT_RS19985 - CoA-transferase, at 26,533 to 27,732
_RS19985
Position (kb) 24
25
26 Strain fitness (log2 ratio) -2
-1
0
1
2 at 23.928 kb on + strand, within BPHYT_RS19970 at 23.991 kb on + strand, within BPHYT_RS19970 at 23.991 kb on + strand, within BPHYT_RS19970 at 24.211 kb on - strand, within BPHYT_RS19970 at 24.211 kb on - strand, within BPHYT_RS19970 at 24.270 kb on + strand, within BPHYT_RS19970 at 24.271 kb on - strand, within BPHYT_RS19970 at 24.336 kb on + strand, within BPHYT_RS19970 at 24.373 kb on + strand, within BPHYT_RS19970 at 24.374 kb on - strand, within BPHYT_RS19970 at 24.414 kb on - strand, within BPHYT_RS19970 at 24.692 kb on + strand at 24.895 kb on - strand at 24.902 kb on - strand at 25.011 kb on + strand, within BPHYT_RS19975 at 25.012 kb on - strand, within BPHYT_RS19975 at 25.053 kb on + strand, within BPHYT_RS19975 at 25.129 kb on - strand, within BPHYT_RS19975 at 25.251 kb on + strand, within BPHYT_RS19975 at 25.405 kb on - strand, within BPHYT_RS19975 at 25.428 kb on + strand, within BPHYT_RS19975 at 25.428 kb on + strand, within BPHYT_RS19975 at 25.429 kb on - strand, within BPHYT_RS19975 at 25.674 kb on + strand at 25.737 kb on + strand at 26.172 kb on + strand, within BPHYT_RS19980 at 26.172 kb on + strand, within BPHYT_RS19980 at 26.173 kb on - strand, within BPHYT_RS19980
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 23,928 + BPHYT_RS19970 0.31 -0.7 23,991 + BPHYT_RS19970 0.37 +0.1 23,991 + BPHYT_RS19970 0.37 -0.2 24,211 - BPHYT_RS19970 0.59 +0.1 24,211 - BPHYT_RS19970 0.59 -0.0 24,270 + BPHYT_RS19970 0.64 -0.0 24,271 - BPHYT_RS19970 0.65 -0.3 24,336 + BPHYT_RS19970 0.71 +0.2 24,373 + BPHYT_RS19970 0.75 -1.4 24,374 - BPHYT_RS19970 0.75 -0.7 24,414 - BPHYT_RS19970 0.79 +0.4 24,692 + +1.2 24,895 - -1.6 24,902 - -0.8 25,011 + BPHYT_RS19975 0.13 -0.7 25,012 - BPHYT_RS19975 0.13 -0.2 25,053 + BPHYT_RS19975 0.18 -0.3 25,129 - BPHYT_RS19975 0.28 -0.8 25,251 + BPHYT_RS19975 0.44 -0.3 25,405 - BPHYT_RS19975 0.64 -1.1 25,428 + BPHYT_RS19975 0.67 -2.0 25,428 + BPHYT_RS19975 0.67 -0.6 25,429 - BPHYT_RS19975 0.68 -0.1 25,674 + -0.1 25,737 + +1.9 26,172 + BPHYT_RS19980 0.56 -0.7 26,172 + BPHYT_RS19980 0.56 +0.3 26,173 - BPHYT_RS19980 0.57 +0.3
Or see this region's nucleotide sequence