Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_432 and PfGW456L13_433 overlap by 4 nucleotides PfGW456L13_433 and PfGW456L13_434 are separated by 145 nucleotides PfGW456L13_434 and PfGW456L13_435 are separated by 146 nucleotides
PfGW456L13_432 - Taurine transport ATP-binding protein TauB, at 497,988 to 498,782
_432
PfGW456L13_433 - Taurine transport system permease protein TauC, at 498,779 to 499,612
_433
PfGW456L13_434 - Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17), at 499,758 to 500,600
_434
PfGW456L13_435 - Oxidoreductase, aldo/keto reductase family, at 500,747 to 501,784
_435
Position (kb) 499
500
501 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 498.789 kb on - strand at 498.828 kb on + strand at 498.829 kb on - strand at 498.829 kb on - strand at 498.829 kb on - strand at 498.897 kb on + strand, within PfGW456L13_433 at 498.979 kb on - strand, within PfGW456L13_433 at 498.995 kb on + strand, within PfGW456L13_433 at 498.995 kb on + strand, within PfGW456L13_433 at 498.995 kb on + strand, within PfGW456L13_433 at 498.995 kb on + strand, within PfGW456L13_433 at 498.995 kb on + strand, within PfGW456L13_433 at 498.997 kb on + strand, within PfGW456L13_433 at 498.997 kb on + strand, within PfGW456L13_433 at 499.148 kb on + strand, within PfGW456L13_433 at 499.173 kb on - strand, within PfGW456L13_433 at 499.173 kb on - strand, within PfGW456L13_433 at 499.232 kb on + strand, within PfGW456L13_433 at 499.232 kb on + strand, within PfGW456L13_433 at 499.232 kb on + strand, within PfGW456L13_433 at 499.512 kb on + strand, within PfGW456L13_433 at 499.513 kb on - strand, within PfGW456L13_433 at 499.513 kb on - strand, within PfGW456L13_433 at 499.619 kb on - strand at 499.625 kb on + strand at 499.626 kb on - strand at 499.693 kb on + strand at 499.693 kb on + strand at 499.693 kb on + strand at 499.693 kb on + strand at 499.693 kb on + strand at 499.693 kb on + strand at 499.694 kb on - strand at 499.694 kb on - strand at 499.694 kb on - strand at 499.694 kb on - strand at 499.694 kb on - strand at 499.694 kb on - strand at 499.694 kb on - strand at 499.694 kb on - strand at 499.694 kb on - strand at 499.725 kb on + strand at 499.783 kb on + strand at 499.784 kb on - strand at 499.784 kb on - strand at 499.972 kb on - strand, within PfGW456L13_434 at 500.157 kb on + strand, within PfGW456L13_434 at 500.158 kb on - strand, within PfGW456L13_434 at 500.159 kb on + strand, within PfGW456L13_434 at 500.160 kb on - strand, within PfGW456L13_434 at 500.521 kb on - strand at 500.584 kb on + strand at 500.584 kb on + strand at 500.584 kb on + strand at 500.584 kb on + strand at 500.584 kb on + strand at 500.584 kb on + strand at 500.584 kb on + strand at 500.584 kb on + strand at 500.585 kb on - strand at 500.585 kb on - strand at 500.585 kb on - strand at 500.585 kb on - strand at 500.585 kb on - strand at 500.615 kb on + strand at 500.616 kb on - strand at 500.685 kb on + strand at 500.748 kb on + strand at 500.748 kb on + strand at 500.749 kb on - strand at 500.749 kb on - strand at 500.749 kb on - strand at 500.830 kb on + strand at 500.831 kb on - strand at 501.084 kb on + strand, within PfGW456L13_435 at 501.085 kb on - strand, within PfGW456L13_435 at 501.085 kb on - strand, within PfGW456L13_435 at 501.085 kb on - strand, within PfGW456L13_435 at 501.195 kb on + strand, within PfGW456L13_435 at 501.195 kb on + strand, within PfGW456L13_435 at 501.196 kb on - strand, within PfGW456L13_435 at 501.273 kb on + strand, within PfGW456L13_435 at 501.274 kb on - strand, within PfGW456L13_435 at 501.291 kb on + strand, within PfGW456L13_435 at 501.291 kb on + strand, within PfGW456L13_435 at 501.291 kb on + strand, within PfGW456L13_435 at 501.291 kb on + strand, within PfGW456L13_435 at 501.291 kb on + strand, within PfGW456L13_435 at 501.291 kb on + strand, within PfGW456L13_435 at 501.291 kb on + strand, within PfGW456L13_435 at 501.291 kb on + strand, within PfGW456L13_435 at 501.292 kb on - strand, within PfGW456L13_435 at 501.292 kb on - strand, within PfGW456L13_435 at 501.292 kb on - strand, within PfGW456L13_435 at 501.292 kb on - strand, within PfGW456L13_435 at 501.376 kb on - strand, within PfGW456L13_435 at 501.390 kb on + strand, within PfGW456L13_435 at 501.390 kb on + strand, within PfGW456L13_435 at 501.391 kb on - strand, within PfGW456L13_435 at 501.391 kb on - strand, within PfGW456L13_435 at 501.438 kb on + strand, within PfGW456L13_435 at 501.438 kb on + strand, within PfGW456L13_435 at 501.438 kb on + strand, within PfGW456L13_435 at 501.439 kb on - strand, within PfGW456L13_435 at 501.439 kb on - strand, within PfGW456L13_435 at 501.439 kb on - strand, within PfGW456L13_435 at 501.439 kb on - strand, within PfGW456L13_435 at 501.465 kb on + strand, within PfGW456L13_435 at 501.545 kb on + strand, within PfGW456L13_435 at 501.546 kb on - strand, within PfGW456L13_435 at 501.546 kb on - strand, within PfGW456L13_435 at 501.588 kb on + strand, within PfGW456L13_435
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 498,789 - +0.9 498,828 + +1.0 498,829 - -0.5 498,829 - +0.7 498,829 - -0.4 498,897 + PfGW456L13_433 0.14 +0.5 498,979 - PfGW456L13_433 0.24 +0.3 498,995 + PfGW456L13_433 0.26 +1.5 498,995 + PfGW456L13_433 0.26 +0.7 498,995 + PfGW456L13_433 0.26 -1.8 498,995 + PfGW456L13_433 0.26 +1.0 498,995 + PfGW456L13_433 0.26 +1.2 498,997 + PfGW456L13_433 0.26 +0.7 498,997 + PfGW456L13_433 0.26 +0.9 499,148 + PfGW456L13_433 0.44 +1.3 499,173 - PfGW456L13_433 0.47 -1.2 499,173 - PfGW456L13_433 0.47 +0.1 499,232 + PfGW456L13_433 0.54 -0.1 499,232 + PfGW456L13_433 0.54 +0.1 499,232 + PfGW456L13_433 0.54 -0.8 499,512 + PfGW456L13_433 0.88 +1.7 499,513 - PfGW456L13_433 0.88 +0.1 499,513 - PfGW456L13_433 0.88 -0.3 499,619 - -0.1 499,625 + +0.0 499,626 - -2.4 499,693 + +0.3 499,693 + +0.4 499,693 + -1.9 499,693 + +1.4 499,693 + +0.1 499,693 + +0.4 499,694 - +0.6 499,694 - +1.1 499,694 - +1.1 499,694 - -0.9 499,694 - +0.3 499,694 - +0.2 499,694 - +0.2 499,694 - -1.3 499,694 - +0.8 499,725 + -0.6 499,783 + -0.4 499,784 - +1.7 499,784 - +1.3 499,972 - PfGW456L13_434 0.25 -1.0 500,157 + PfGW456L13_434 0.47 -0.8 500,158 - PfGW456L13_434 0.47 -0.8 500,159 + PfGW456L13_434 0.48 -0.1 500,160 - PfGW456L13_434 0.48 +0.2 500,521 - -2.1 500,584 + +0.3 500,584 + -0.7 500,584 + +0.9 500,584 + -0.7 500,584 + +0.9 500,584 + +1.4 500,584 + +1.0 500,584 + -2.8 500,585 - +0.3 500,585 - -0.7 500,585 - +0.0 500,585 - +1.3 500,585 - -0.3 500,615 + +0.5 500,616 - -1.2 500,685 + -2.0 500,748 + -1.5 500,748 + -0.5 500,749 - -1.8 500,749 - -0.2 500,749 - +0.2 500,830 + -0.7 500,831 - -0.9 501,084 + PfGW456L13_435 0.32 -0.0 501,085 - PfGW456L13_435 0.33 +0.6 501,085 - PfGW456L13_435 0.33 -0.7 501,085 - PfGW456L13_435 0.33 -2.8 501,195 + PfGW456L13_435 0.43 +1.7 501,195 + PfGW456L13_435 0.43 +0.5 501,196 - PfGW456L13_435 0.43 -0.2 501,273 + PfGW456L13_435 0.51 -0.3 501,274 - PfGW456L13_435 0.51 -0.6 501,291 + PfGW456L13_435 0.52 +0.1 501,291 + PfGW456L13_435 0.52 +0.2 501,291 + PfGW456L13_435 0.52 -0.2 501,291 + PfGW456L13_435 0.52 -0.7 501,291 + PfGW456L13_435 0.52 +0.9 501,291 + PfGW456L13_435 0.52 +0.1 501,291 + PfGW456L13_435 0.52 +1.1 501,291 + PfGW456L13_435 0.52 -0.1 501,292 - PfGW456L13_435 0.53 +0.5 501,292 - PfGW456L13_435 0.53 -0.1 501,292 - PfGW456L13_435 0.53 -1.4 501,292 - PfGW456L13_435 0.53 -0.3 501,376 - PfGW456L13_435 0.61 -0.4 501,390 + PfGW456L13_435 0.62 -0.2 501,390 + PfGW456L13_435 0.62 -0.1 501,391 - PfGW456L13_435 0.62 +0.8 501,391 - PfGW456L13_435 0.62 -1.4 501,438 + PfGW456L13_435 0.67 +0.6 501,438 + PfGW456L13_435 0.67 -2.5 501,438 + PfGW456L13_435 0.67 -0.3 501,439 - PfGW456L13_435 0.67 -0.4 501,439 - PfGW456L13_435 0.67 -1.1 501,439 - PfGW456L13_435 0.67 -0.8 501,439 - PfGW456L13_435 0.67 -2.1 501,465 + PfGW456L13_435 0.69 +0.6 501,545 + PfGW456L13_435 0.77 -0.1 501,546 - PfGW456L13_435 0.77 -1.1 501,546 - PfGW456L13_435 0.77 +0.2 501,588 + PfGW456L13_435 0.81 +0.0
Or see this region's nucleotide sequence