Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2296 and PfGW456L13_2297 overlap by 25 nucleotides PfGW456L13_2297 and PfGW456L13_2298 overlap by 1 nucleotides
PfGW456L13_2296 - Thiol:disulfide interchange protein DsbG precursor, at 2,522,539 to 2,523,306
_2296
PfGW456L13_2297 - Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase, at 2,523,282 to 2,524,136
_2297
PfGW456L13_2298 - Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8), at 2,524,136 to 2,525,872
_2298
Position (kb)
2524
2525
2526 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2523.422 kb on - strand, within PfGW456L13_2297 at 2523.422 kb on - strand, within PfGW456L13_2297 at 2523.422 kb on - strand, within PfGW456L13_2297 at 2523.431 kb on + strand, within PfGW456L13_2297 at 2523.431 kb on + strand, within PfGW456L13_2297 at 2523.676 kb on + strand, within PfGW456L13_2297 at 2523.749 kb on - strand, within PfGW456L13_2297 at 2523.937 kb on + strand, within PfGW456L13_2297 at 2523.937 kb on + strand, within PfGW456L13_2297 at 2523.938 kb on - strand, within PfGW456L13_2297 at 2523.949 kb on + strand, within PfGW456L13_2297 at 2524.178 kb on - strand at 2524.178 kb on - strand at 2524.242 kb on - strand at 2524.414 kb on - strand, within PfGW456L13_2298 at 2524.417 kb on - strand, within PfGW456L13_2298 at 2524.944 kb on + strand, within PfGW456L13_2298 at 2524.945 kb on - strand, within PfGW456L13_2298 at 2524.945 kb on - strand, within PfGW456L13_2298 at 2524.945 kb on - strand, within PfGW456L13_2298 at 2524.945 kb on - strand, within PfGW456L13_2298 at 2525.227 kb on - strand, within PfGW456L13_2298 at 2525.227 kb on - strand, within PfGW456L13_2298 at 2525.227 kb on - strand, within PfGW456L13_2298 at 2525.247 kb on - strand, within PfGW456L13_2298 at 2525.251 kb on - strand, within PfGW456L13_2298 at 2525.251 kb on - strand, within PfGW456L13_2298 at 2525.251 kb on - strand, within PfGW456L13_2298 at 2525.251 kb on - strand, within PfGW456L13_2298 at 2525.251 kb on - strand, within PfGW456L13_2298 at 2525.251 kb on - strand, within PfGW456L13_2298 at 2525.251 kb on - strand, within PfGW456L13_2298 at 2525.251 kb on - strand, within PfGW456L13_2298 at 2525.251 kb on - strand, within PfGW456L13_2298 at 2525.251 kb on - strand, within PfGW456L13_2298 at 2525.590 kb on - strand, within PfGW456L13_2298 at 2525.698 kb on - strand, within PfGW456L13_2298 at 2525.698 kb on - strand, within PfGW456L13_2298 at 2525.698 kb on - strand, within PfGW456L13_2298 at 2525.698 kb on - strand, within PfGW456L13_2298 at 2525.722 kb on - strand at 2525.722 kb on - strand at 2525.722 kb on - strand at 2525.895 kb on - strand at 2526.033 kb on + strand at 2526.033 kb on + strand at 2526.034 kb on - strand at 2526.045 kb on - strand at 2526.088 kb on + strand at 2526.199 kb on + strand at 2526.199 kb on + strand at 2526.199 kb on + strand at 2526.201 kb on + strand at 2526.222 kb on - strand at 2526.223 kb on + strand at 2526.223 kb on + strand at 2526.223 kb on + strand at 2526.224 kb on - strand at 2526.224 kb on - strand at 2526.273 kb on + strand at 2526.352 kb on + strand at 2526.353 kb on - strand at 2526.353 kb on - strand at 2526.353 kb on - strand at 2526.353 kb on - strand at 2526.366 kb on + strand at 2526.374 kb on + strand at 2526.374 kb on + strand at 2526.374 kb on + strand at 2526.374 kb on + strand at 2526.375 kb on - strand at 2526.375 kb on - strand at 2526.375 kb on - strand at 2526.375 kb on - strand at 2526.416 kb on + strand at 2526.417 kb on - strand at 2526.446 kb on + strand at 2526.447 kb on - strand at 2526.486 kb on - strand at 2526.487 kb on + strand at 2526.527 kb on - strand at 2526.530 kb on - strand at 2526.584 kb on + strand at 2526.584 kb on + strand at 2526.584 kb on + strand at 2526.585 kb on - strand at 2526.585 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 2,523,422 - PfGW456L13_2297 0.16 +1.2 2,523,422 - PfGW456L13_2297 0.16 -1.0 2,523,422 - PfGW456L13_2297 0.16 -0.0 2,523,431 + PfGW456L13_2297 0.17 -0.1 2,523,431 + PfGW456L13_2297 0.17 -1.9 2,523,676 + PfGW456L13_2297 0.46 -1.1 2,523,749 - PfGW456L13_2297 0.55 -1.6 2,523,937 + PfGW456L13_2297 0.77 +0.6 2,523,937 + PfGW456L13_2297 0.77 -0.8 2,523,938 - PfGW456L13_2297 0.77 -1.0 2,523,949 + PfGW456L13_2297 0.78 -1.4 2,524,178 - +1.4 2,524,178 - +0.7 2,524,242 - +1.8 2,524,414 - PfGW456L13_2298 0.16 +0.0 2,524,417 - PfGW456L13_2298 0.16 -0.3 2,524,944 + PfGW456L13_2298 0.47 +0.2 2,524,945 - PfGW456L13_2298 0.47 +2.0 2,524,945 - PfGW456L13_2298 0.47 -0.3 2,524,945 - PfGW456L13_2298 0.47 +0.9 2,524,945 - PfGW456L13_2298 0.47 +0.3 2,525,227 - PfGW456L13_2298 0.63 +0.6 2,525,227 - PfGW456L13_2298 0.63 -0.6 2,525,227 - PfGW456L13_2298 0.63 +0.2 2,525,247 - PfGW456L13_2298 0.64 -0.3 2,525,251 - PfGW456L13_2298 0.64 -0.2 2,525,251 - PfGW456L13_2298 0.64 -0.5 2,525,251 - PfGW456L13_2298 0.64 +1.7 2,525,251 - PfGW456L13_2298 0.64 -0.4 2,525,251 - PfGW456L13_2298 0.64 -0.4 2,525,251 - PfGW456L13_2298 0.64 -0.7 2,525,251 - PfGW456L13_2298 0.64 +0.2 2,525,251 - PfGW456L13_2298 0.64 -0.8 2,525,251 - PfGW456L13_2298 0.64 -1.1 2,525,251 - PfGW456L13_2298 0.64 -1.5 2,525,590 - PfGW456L13_2298 0.84 +1.6 2,525,698 - PfGW456L13_2298 0.90 -0.0 2,525,698 - PfGW456L13_2298 0.90 +1.0 2,525,698 - PfGW456L13_2298 0.90 -0.9 2,525,698 - PfGW456L13_2298 0.90 -0.4 2,525,722 - -1.0 2,525,722 - +0.3 2,525,722 - +1.2 2,525,895 - +0.0 2,526,033 + -2.4 2,526,033 + +0.7 2,526,034 - -0.9 2,526,045 - -0.6 2,526,088 + -1.1 2,526,199 + -1.8 2,526,199 + +1.6 2,526,199 + -1.6 2,526,201 + -0.9 2,526,222 - +0.8 2,526,223 + -1.1 2,526,223 + -0.5 2,526,223 + +0.2 2,526,224 - +0.1 2,526,224 - -0.4 2,526,273 + -0.6 2,526,352 + +0.9 2,526,353 - +0.2 2,526,353 - +1.1 2,526,353 - -0.2 2,526,353 - -0.1 2,526,366 + -2.1 2,526,374 + -1.4 2,526,374 + +0.9 2,526,374 + +0.0 2,526,374 + -1.8 2,526,375 - +1.0 2,526,375 - -0.2 2,526,375 - -0.4 2,526,375 - +0.9 2,526,416 + +0.8 2,526,417 - -0.6 2,526,446 + -0.9 2,526,447 - +0.2 2,526,486 - -0.2 2,526,487 + +0.9 2,526,527 - -0.2 2,526,530 - -0.1 2,526,584 + +1.4 2,526,584 + -0.9 2,526,584 + -1.2 2,526,585 - +0.4 2,526,585 - +0.1
Or see this region's nucleotide sequence